FFCP PHASE1:Mm9::chr9:53916276..53916319,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:53916276..53916319,-
|short_description=p2@Tnfaip8l3
|description=CAGE_peak_2_at_Tnfaip8l3_5end
|association_with_transcript=-58bp_to_ENSMUST00000098760,NM...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=244882 | |EntrezGene=244882 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3TBL6 | |UniProt=Q3TBL6 | ||
|association_with_transcript=-58bp_to_ENSMUST00000098760,NM_001033535,uc009pmt.2_5end | |||
|cluster_id=chr9:53916276..53916319,- | |||
|description=CAGE_peak_2_at_Tnfaip8l3_5end | |||
|id=chr9:53916276..53916319,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.14e-11,9;CL:0002251,3.14e-11,9;CL:0000239,8.87e-08,6;CL:0000677,8.87e-08,6;CL:0000584,8.87e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!8.77e-10!15;UBERON:0001242!4.27e-09!13;UBERON:0000060!4.27e-09!13;UBERON:0001262!4.27e-09!13;UBERON:0004786!4.27e-09!13;UBERON:0002020!4.16e-08!34;UBERON:0001049!1.81e-07!52;UBERON:0005068!1.81e-07!52;UBERON:0006241!1.81e-07!52;UBERON:0007135!1.81e-07!52;UBERON:0000955!6.72e-07!50;UBERON:0006238!6.72e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,3.39e-14,13;UBERON:0001262,3.39e-14,13;UBERON:0004786,3.39e-14,13;UBERON:0000160,5.53e-14,31;UBERON:0000344,1.07e-13,15;UBERON:0003350,3.14e-11,9;UBERON:0004808,3.14e-11,9;UBERON:0001277,3.14e-11,9;UBERON:0007023,1.47e-09,51;UBERON:0000485,8.07e-09,11;UBERON:0002020,8.10e-09,34;UBERON:0002021,1.16e-07,10;UBERON:0000411,1.16e-07,10;UBERON:0001950,1.16e-07,10;UBERON:0000073,1.88e-07,54;UBERON:0005409,2.39e-07,47;UBERON:0004923,2.76e-07,24;UBERON:0011216,9.61e-07,194 | |||
|phase1_expression=0,2.79180326111489,1.36499771816861,4.53696316960245,2.50447864973174,1.34303417529512,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,1.11994695955385,0.91763712426868,2.8711598205751,1.7230479846363,2.37018355954478,5.70070258369122,4.53654233567875,0.665191531965914,0,0,0,1.73310971850765,2.82598897109437,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,1.71390590642282,0.441737081903227,0,0.479227355091182,0,1.10115880999389,2.80912143787413,1.38245879930619,0,0,0.52091337055676,0.558365998002762,3.37657566019008,3.97275444219706,1.17851434189467,1.42371680799103,1.1183966749518,0,0,1.44932244350839,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,5.10914110417183,0,0,0,0.149790639404823,2.74500361691176,0.628271760564322,4.17178368461463,3.06858548796397,1.45451631191692,1.62241263067758,0.305518091550949,0.124406970610093,0,0,0,0.229902104433473,0,0,0.204109497453984,0.512454881139399,0.374806898238915,0,0,0.567318240503458,1.58356011747554,1.09597866213787,1.94633074457919,2.78601733217733,1.64625709126355,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0.465067889500816,0,0.233530684734339,0.329119699826961,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,12.1968170167194,1.13195073617213,5.61711931072457,1.58670339998127,0,0.232236671860439,0,0,0,0.190225626112559,3.32170343081158,0.494096864172033,0,1.1937388322469,0.779856348476481,3.59527763461689,3.45820879799511,1.7922714592893,0.379335801906163,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0,0,0.252578877947112,0.179397413521912,0,0.554259570499814,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.472905432318573,1.10732344824387,0.478364305972461,0.81931657357869,0.690739927463582,1.01254341007058,0,0,0,0,0.80275294993896,0.820481806145422,0,0.252470927204373,0,0,0,0,0,0,0,0,0,1.28528526568723,1.41940085208269,0,0.488660878060728,3.95928295134085,0,0,0,0.377210159511796,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0.704015124191131,0,0.661585194164886,2.96795255294664,0,0.361877549568935,0.238744688006273,0.492422699235184,1.1659233465194,2.78137953015765,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.269728692769641,0.578574190077352,0,0.259229946583586,0,0,0,0,0.194451188344048,0,0.337912250981556,0.117357238645754,0,0,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,2.0405734525369,0,0,0,2.12508553435409,7.69498149349846,6.59345847362154,3.21552568618599,0,1.6942555278512,0.460325236507177,0,1.71853182343688,4.11049511862385,3.0215755895588,1.35004500046361,1.35096360967266,2.26571204492102,1.55328093525546,0,0,0,0.972426868273176,0.419226325255965,0.551530525350042,0,0.618105171716683,0,0.252697211763798,0,0.565879024158229,0.280924522409647,0.576226371643824,0.459483751644906,0.952587382566147,0.463537303779422,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0,0.658765662907314,0.423073039458382,0,0,0.135804113845862,1.12228454331548,0.949080144993393,0.197008964751127,0,0.154936841185966,0.578719832943424,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0.661774257358546,0 | |phase1_expression=0,2.79180326111489,1.36499771816861,4.53696316960245,2.50447864973174,1.34303417529512,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,1.11994695955385,0.91763712426868,2.8711598205751,1.7230479846363,2.37018355954478,5.70070258369122,4.53654233567875,0.665191531965914,0,0,0,1.73310971850765,2.82598897109437,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0,0,0.207379224616955,0.540023753326763,0.210324961351382,1.71390590642282,0.441737081903227,0,0.479227355091182,0,1.10115880999389,2.80912143787413,1.38245879930619,0,0,0.52091337055676,0.558365998002762,3.37657566019008,3.97275444219706,1.17851434189467,1.42371680799103,1.1183966749518,0,0,1.44932244350839,0,0,0.539703191637817,0.649776417447669,0.448026887097336,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.41889341362691,5.10914110417183,0,0,0,0.149790639404823,2.74500361691176,0.628271760564322,4.17178368461463,3.06858548796397,1.45451631191692,1.62241263067758,0.305518091550949,0.124406970610093,0,0,0,0.229902104433473,0,0,0.204109497453984,0.512454881139399,0.374806898238915,0,0,0.567318240503458,1.58356011747554,1.09597866213787,1.94633074457919,2.78601733217733,1.64625709126355,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0.465067889500816,0,0.233530684734339,0.329119699826961,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,12.1968170167194,1.13195073617213,5.61711931072457,1.58670339998127,0,0.232236671860439,0,0,0,0.190225626112559,3.32170343081158,0.494096864172033,0,1.1937388322469,0.779856348476481,3.59527763461689,3.45820879799511,1.7922714592893,0.379335801906163,0.114248512609729,0,0.203651327845314,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0.162135226775035,0,1.43768206527355,0,0,0.252578877947112,0.179397413521912,0,0.554259570499814,0,0.162964976442026,0,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.472905432318573,1.10732344824387,0.478364305972461,0.81931657357869,0.690739927463582,1.01254341007058,0,0,0,0,0.80275294993896,0.820481806145422,0,0.252470927204373,0,0,0,0,0,0,0,0,0,1.28528526568723,1.41940085208269,0,0.488660878060728,3.95928295134085,0,0,0,0.377210159511796,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0.704015124191131,0,0.661585194164886,2.96795255294664,0,0.361877549568935,0.238744688006273,0.492422699235184,1.1659233465194,2.78137953015765,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0.269728692769641,0.578574190077352,0,0.259229946583586,0,0,0,0,0.194451188344048,0,0.337912250981556,0.117357238645754,0,0,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,2.0405734525369,0,0,0,2.12508553435409,7.69498149349846,6.59345847362154,3.21552568618599,0,1.6942555278512,0.460325236507177,0,1.71853182343688,4.11049511862385,3.0215755895588,1.35004500046361,1.35096360967266,2.26571204492102,1.55328093525546,0,0,0,0.972426868273176,0.419226325255965,0.551530525350042,0,0.618105171716683,0,0.252697211763798,0,0.565879024158229,0.280924522409647,0.576226371643824,0.459483751644906,0.952587382566147,0.463537303779422,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0,0.658765662907314,0.423073039458382,0,0,0.135804113845862,1.12228454331548,0.949080144993393,0.197008964751127,0,0.154936841185966,0.578719832943424,0.499621155875892,0.233931608445408,0.214871054048298,0.382576664137687,0.661774257358546,0 | ||
|short_description=p2@Tnfaip8l3 | |||
}} | }} |
Latest revision as of 20:27, 26 September 2015
Short description: | p2@Tnfaip8l3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tnfaip8l3_5end |
Coexpression cluster: | NA |
Association with transcript: | -58bp_to_ENSMUST00000098760, NM_001033535, uc009pmt.2_5end |
EntrezGene: | Tnfaip8l3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.14e-11 | 9 |
epithelial cell of alimentary canal | 3.14e-11 | 9 |
brush border epithelial cell | 8.87e-08 | 6 |
gut absorptive cell | 8.87e-08 | 6 |
enterocyte | 8.87e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 3.39e-14 | 13 |
wall of intestine | 3.39e-14 | 13 |
gastrointestinal system mucosa | 3.39e-14 | 13 |
intestine | 5.53e-14 | 31 |
mucosa | 1.07e-13 | 15 |
epithelium of mucosa | 3.14e-11 | 9 |
gastrointestinal system epithelium | 3.14e-11 | 9 |
intestinal epithelium | 3.14e-11 | 9 |
adult organism | 1.47e-09 | 51 |
simple columnar epithelium | 8.07e-09 | 11 |
gray matter | 8.10e-09 | 34 |
occipital lobe | 1.16e-07 | 10 |
visual cortex | 1.16e-07 | 10 |
neocortex | 1.16e-07 | 10 |
regional part of nervous system | 1.88e-07 | 54 |
gastrointestinal system | 2.39e-07 | 47 |
organ component layer | 2.76e-07 | 24 |
organ system subdivision | 9.61e-07 | 194 |