Personal tools

UBERON:0002134: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{UBERON |id=UBERON:0002134 |name=tricuspid valve |namespace= |def="Atrioventricular valve which has as its parts the anterior, posterior and septal leaflets, attached to ...")
 
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{UBERON
{{UBERON
|id=UBERON:0002134
|alt_id=UBERON:FMA_7234-MA_0000090
|name=tricuspid valve
|anatomical_img_id=FMA:7234
|namespace=
|def="Atrioventricular valve which has as its parts the anterior, posterior and septal leaflets, attached to the fibrous ring of tricuspid valve.[FMA]" [FMA:FMA, Wikipedia:Tricuspid_valve]
|xref=EHDAA:7427;;EHDAA2:0004029;;EMAPA:17873;;FMA:7234;;GAID:567;;galen:TricuspidValve;;http://upload.wikimedia.org/wikipedia/commons/thumb/2/20/Diagram_of_the_human_heart_%28cropped%29.svg/200px-Diagram_of_the_human_heart_%28cropped%29.svg.png;;MA:0000090;;MESH:A.07.541.510.893;;ncithesaurus:Tricuspid_Valve;;OpenCyc:Mx4rvuWAAJwpEbGdrcN5Y29ycA;;RETIRED_EHDAA2:0002081;;SCTID:181288007;;VHOG:0000816
|is_a=UBERON:0002133;;UBERON:0005208
|synonym="right atrioventricular valve" EXACT [];;"valva atrioventricularis dextra" EXACT [FMA:7234, FMA:TA]
|comment=This class was created automatically from a combination of ontologies
|comment=This class was created automatically from a combination of ontologies
|alt_id=UBERON:FMA_7234-MA_0000090
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Atrioventricular valve which has as its parts the anterior, posterior and septal leaflets, attached to the fibrous ring of tricuspid valve.[FMA]" [FMA:FMA, Wikipedia:Tricuspid_valve]
|subset=uberon_slim
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0002134
|is_a=UBERON:0002133 ;;UBERON:0005208
|is_obsolete=
|located_in=
|located_in=
|name=tricuspid valve
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0005965
|part_of=UBERON:0005965
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=uberon_slim
|synonym="right atrioventricular valve" EXACT [];;"valva atrioventricularis dextra" EXACT [FMA:7234, FMA:TA];;"valva atrioventricularis dextra, valvula tricuspidalis" RELATED LATIN [Wikipedia:Tricuspid_valve]
|union_of=
|xref=EHDAA2:0004029;;EHDAA:7427;;EMAPA:17873;;FMA:7234;;GAID:567;;galen:TricuspidValve;;http://upload.wikimedia.org/wikipedia/commons/2/20/Diagram_of_the_human_heart_%28cropped%29.svg;;http://upload.wikimedia.org/wikipedia/commons/thumb/2/20/Diagram_of_the_human_heart_%28cropped%29.svg/200px-Diagram_of_the_human_heart_%28cropped%29.svg.png;;MA:0000090;;MESH:A.07.541.510.893;;ncithesaurus:Tricuspid_Valve;;OpenCyc:Mx4rvuWAAJwpEbGdrcN5Y29ycA;;RETIRED_EHDAA2:0002081;;SCTID:181288007;;VHOG:0000816
}}
}}

Latest revision as of 17:26, 12 September 2014

Name:tricuspid valve
Namespace:FANTOM
Definition:"Atrioventricular valve which has as its parts the anterior, posterior and septal leaflets, attached to the fibrous ring of tricuspid valve.[FMA]" [FMA:FMA, Wikipedia:Tricuspid_valve]
Xrefs:
links:

EHDAA2:0004029
EHDAA:7427
EMAPA:17873
FMA:7234
GAID:567
galen:TricuspidValve
[1]
[ 200px-Diagram_of_the_human_heart_%28cropped%29.svg.png 200px-Diagram_of_the_human_heart_%28cropped%29.svg.png]
MA:0000090
MESH:A.07.541.510.893
ncithesaurus:Tricuspid_Valve
OpenCyc:Mx4rvuWAAJwpEbGdrcN5Y29ycA
RETIRED_EHDAA2:0002081
SCTID:181288007

VHOG:0000816
Synonyms: "right atrioventricular valve" EXACT []
"valva atrioventricularis dextra" EXACT [FMA:7234, FMA:TA]
"valva atrioventricularis dextra, valvula tricuspidalis" RELATED LATIN [Wikipedia:Tricuspid_valve]
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_7234-MA_0000090
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0002133(atrioventricular valve),UBERON:0005208(right atrium valve)
part_of:UBERON:0005965(outflow part of right atrium)



Children

derives from:FF:0010207 (human heart, tricuspid valve - adult sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002134 (tricuspid valve), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr15:86272097..86272099,+#_516f28a422c7b19412de372bdee1f0b2p@chr15:86272097..86272099, +
5.42e-195FFCP PHASE2:Hg19::chr10:92678409..92678410,-#_516f28a422c7b19412de372bdee1f0b2p@chr10:92678409..92678410, -
5.42e-195FFCP PHASE1:Hg19::chr15:86272097..86272099,+#_516f28a422c7b19412de372bdee1f0b2p@chr15:86272097..86272099, +
5.42e-195FFCP PHASE1:Hg19::chr10:92678409..92678410,-#_516f28a422c7b19412de372bdee1f0b2p@chr10:92678409..92678410, -
5.42e-195FFCP PHASE1:Hg19::chr5:99390735..99390743,-#_516f28a422c7b19412de372bdee1f0b2p@chr5:99390735..99390743, -
5.42e-195FFCP PHASE2:Hg19::chr5:99390735..99390743,-#_516f28a422c7b19412de372bdee1f0b2p@chr5:99390735..99390743, -
9.37e-99FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_923b982775f302830c33cc33a65cccf7p@chr2:179656442..179656451, -
9.37e-99FFCP PHASE2:Hg19::chr7:97501400..97501407,-#_923b982775f302830c33cc33a65cccf7p16@ASNS
9.37e-99FFCP PHASE1:Hg19::chr7:97501400..97501407,-#_923b982775f302830c33cc33a65cccf7p16@ASNS
9.37e-99FFCP PHASE2:Hg19::chr2:179656442..179656451,-#_923b982775f302830c33cc33a65cccf7p@chr2:179656442..179656451, -
2.55e-98FFCP PHASE2:Hg19::chr5:157747715..157747717,+#_b5d9f8fcc4fa60b7bf430f50e2355244p@chr5:157747715..157747717, +
2.55e-98FFCP PHASE2:Hg19::chr18:4003453..4003457,+#_b5d9f8fcc4fa60b7bf430f50e2355244p@chr18:4003453..4003457, +
2.55e-98FFCP PHASE2:Hg19::chr2:103287330..103287331,+#_b5d9f8fcc4fa60b7bf430f50e2355244p@chr2:103287330..103287331, +
2.55e-98FFCP PHASE1:Hg19::chr6:70647888..70647891,+#_b5d9f8fcc4fa60b7bf430f50e2355244p@chr6:70647888..70647891, +
2.55e-98FFCP PHASE1:Hg19::chr22:36000901..36000903,-#_b5d9f8fcc4fa60b7bf430f50e2355244p@chr22:36000901..36000903, -
2.55e-98FFCP PHASE2:Hg19::chrX:136514398..136514433,-#_b5d9f8fcc4fa60b7bf430f50e2355244p@chrX:136514398..136514433, -
2.55e-98FFCP PHASE1:Hg19::chr14:68375236..68375240,+#_b5d9f8fcc4fa60b7bf430f50e2355244p9@RAD51B
2.55e-98FFCP PHASE1:Hg19::chr8:24530708..24530710,+#_b5d9f8fcc4fa60b7bf430f50e2355244p@chr8:24530708..24530710, +
2.55e-98FFCP PHASE2:Hg19::chr18:39821929..39821932,+#_b5d9f8fcc4fa60b7bf430f50e2355244p@chr18:39821929..39821932, +
2.55e-98FFCP PHASE2:Hg19::chr14:68375236..68375240,+#_b5d9f8fcc4fa60b7bf430f50e2355244p9@RAD51B
2.55e-98FFCP PHASE1:Hg19::chr18:4003453..4003457,+#_b5d9f8fcc4fa60b7bf430f50e2355244p@chr18:4003453..4003457, +
2.55e-98FFCP PHASE1:Hg19::chr2:103287330..103287331,+#_b5d9f8fcc4fa60b7bf430f50e2355244p@chr2:103287330..103287331, +
2.55e-98FFCP PHASE1:Hg19::chr6:104898467..104898469,-#_b5d9f8fcc4fa60b7bf430f50e2355244p@chr6:104898467..104898469, -
2.55e-98FFCP PHASE2:Hg19::chr6:70647888..70647891,+#_b5d9f8fcc4fa60b7bf430f50e2355244p@chr6:70647888..70647891, +
2.55e-98FFCP PHASE1:Hg19::chrX:136514398..136514433,-#_b5d9f8fcc4fa60b7bf430f50e2355244p@chrX:136514398..136514433, -
2.55e-98FFCP PHASE2:Hg19::chr6:104898467..104898469,-#_b5d9f8fcc4fa60b7bf430f50e2355244p@chr6:104898467..104898469, -
2.55e-98FFCP PHASE2:Hg19::chr22:36000901..36000903,-#_b5d9f8fcc4fa60b7bf430f50e2355244p@chr22:36000901..36000903, -
2.55e-98FFCP PHASE2:Hg19::chr8:24530708..24530710,+#_b5d9f8fcc4fa60b7bf430f50e2355244p@chr8:24530708..24530710, +
2.55e-98FFCP PHASE1:Hg19::chr5:157747715..157747717,+#_b5d9f8fcc4fa60b7bf430f50e2355244p@chr5:157747715..157747717, +
2.55e-98FFCP PHASE1:Hg19::chr18:39821929..39821932,+#_b5d9f8fcc4fa60b7bf430f50e2355244p@chr18:39821929..39821932, +
1.23e-66FFCP PHASE2:Hg19::chr2:26508626..26508627,+#_e7eae8f46d2a1536bdefc412b3d39dcdp@chr2:26508626..26508627, +
1.23e-66FFCP PHASE1:Hg19::chr16:10783399..10783401,+#_e7eae8f46d2a1536bdefc412b3d39dcdp@chr16:10783399..10783401, +
1.23e-66FFCP PHASE1:Hg19::chr17:77026478..77026512,+#_e7eae8f46d2a1536bdefc412b3d39dcdp@chr17:77026478..77026512, +
1.23e-66FFCP PHASE1:Hg19::chr2:123518588..123518591,+#_e7eae8f46d2a1536bdefc412b3d39dcdp@chr2:123518588..123518591, +
1.23e-66FFCP PHASE2:Hg19::chr19:35531882..35531893,-#_e7eae8f46d2a1536bdefc412b3d39dcdp@chr19:35531882..35531893, -
1.23e-66FFCP PHASE1:Hg19::chr2:26508626..26508627,+#_e7eae8f46d2a1536bdefc412b3d39dcdp@chr2:26508626..26508627, +
1.23e-66FFCP PHASE2:Hg19::chr2:218844837..218844842,-#_e7eae8f46d2a1536bdefc412b3d39dcdp@chr2:218844837..218844842, -
1.23e-66FFCP PHASE2:Hg19::chr17:77026478..77026512,+#_e7eae8f46d2a1536bdefc412b3d39dcdp@chr17:77026478..77026512, +
1.23e-66FFCP PHASE2:Hg19::chr14:30786806..30786810,-#_e7eae8f46d2a1536bdefc412b3d39dcdp@chr14:30786806..30786810, -
1.23e-66FFCP PHASE2:Hg19::chr2:123518588..123518591,+#_e7eae8f46d2a1536bdefc412b3d39dcdp@chr2:123518588..123518591, +
1.23e-66FFCP PHASE1:Hg19::chr5:99385820..99385831,-#_e7eae8f46d2a1536bdefc412b3d39dcdp@chr5:99385820..99385831, -
1.23e-66FFCP PHASE1:Hg19::chr14:30786806..30786810,-#_e7eae8f46d2a1536bdefc412b3d39dcdp@chr14:30786806..30786810, -
1.23e-66FFCP PHASE2:Hg19::chr5:99385820..99385831,-#_e7eae8f46d2a1536bdefc412b3d39dcdp@chr5:99385820..99385831, -
1.23e-66FFCP PHASE1:Hg19::chr2:218844837..218844842,-#_e7eae8f46d2a1536bdefc412b3d39dcdp@chr2:218844837..218844842, -
1.23e-66FFCP PHASE1:Hg19::chr19:35531882..35531893,-#_e7eae8f46d2a1536bdefc412b3d39dcdp@chr19:35531882..35531893, -
1.23e-66FFCP PHASE2:Hg19::chr16:10783399..10783401,+#_e7eae8f46d2a1536bdefc412b3d39dcdp@chr16:10783399..10783401, +
2.39e-66FFCP PHASE2:Hg19::chr10:63204408..63204412,-#_556b3676c64e4c7b224eee76f08909e8p@chr10:63204408..63204412, -
2.39e-66FFCP PHASE2:Hg19::chr5:150006500..150006508,-#_556b3676c64e4c7b224eee76f08909e8p@chr5:150006500..150006508, -
2.39e-66FFCP PHASE1:Hg19::chr10:63204408..63204412,-#_556b3676c64e4c7b224eee76f08909e8p@chr10:63204408..63204412, -
2.39e-66FFCP PHASE1:Hg19::chr1:189481131..189481134,-#_556b3676c64e4c7b224eee76f08909e8p@chr1:189481131..189481134, -
2.39e-66FFCP PHASE1:Hg19::chr1:1154830..1154841,-#_556b3676c64e4c7b224eee76f08909e8p@chr1:1154830..1154841, -
2.39e-66FFCP PHASE2:Hg19::chr2:42043637..42043640,-#_556b3676c64e4c7b224eee76f08909e8p@chr2:42043637..42043640, -
2.39e-66FFCP PHASE2:Hg19::chr1:203150041..203150049,-#_556b3676c64e4c7b224eee76f08909e8p@chr1:203150041..203150049, -
2.39e-66FFCP PHASE1:Hg19::chr3:135043585..135043591,-#_556b3676c64e4c7b224eee76f08909e8p@chr3:135043585..135043591, -
2.39e-66FFCP PHASE2:Hg19::chr18:40200823..40200829,+#_556b3676c64e4c7b224eee76f08909e8p@chr18:40200823..40200829, +
2.39e-66FFCP PHASE1:Hg19::chr19:44414731..44414733,+#_556b3676c64e4c7b224eee76f08909e8p@chr19:44414731..44414733, +
2.39e-66FFCP PHASE2:Hg19::chr13:56591781..56591785,-#_556b3676c64e4c7b224eee76f08909e8p@chr13:56591781..56591785, -
2.39e-66FFCP PHASE2:Hg19::chr2:238859791..238859796,-#_556b3676c64e4c7b224eee76f08909e8p@chr2:238859791..238859796, -
2.39e-66FFCP PHASE2:Hg19::chr1:1154360..1154365,-#_556b3676c64e4c7b224eee76f08909e8p@chr1:1154360..1154365, -
2.39e-66FFCP PHASE1:Hg19::chr19:7795730..7795740,-#_556b3676c64e4c7b224eee76f08909e8p5@CLEC4G
2.39e-66FFCP PHASE1:Hg19::chr7:54897467..54897468,-#_556b3676c64e4c7b224eee76f08909e8p@chr7:54897467..54897468, -
2.39e-66FFCP PHASE1:Hg19::chr13:56591781..56591785,-#_556b3676c64e4c7b224eee76f08909e8p@chr13:56591781..56591785, -
2.39e-66FFCP PHASE1:Hg19::chr6:104465140..104465144,-#_556b3676c64e4c7b224eee76f08909e8p@chr6:104465140..104465144, -
2.39e-66FFCP PHASE1:Hg19::chr5:175084679..175084689,+#_556b3676c64e4c7b224eee76f08909e8p4@HRH2
2.39e-66FFCP PHASE2:Hg19::chr1:189481131..189481134,-#_556b3676c64e4c7b224eee76f08909e8p@chr1:189481131..189481134, -
2.39e-66FFCP PHASE2:Hg19::chr6:104465140..104465144,-#_556b3676c64e4c7b224eee76f08909e8p@chr6:104465140..104465144, -
2.39e-66FFCP PHASE2:Hg19::chr8:127508635..127508640,+#_556b3676c64e4c7b224eee76f08909e8p@chr8:127508635..127508640, +
2.39e-66FFCP PHASE2:Hg19::chr1:1154830..1154841,-#_556b3676c64e4c7b224eee76f08909e8p@chr1:1154830..1154841, -
2.39e-66FFCP PHASE2:Hg19::chr5:175084679..175084689,+#_556b3676c64e4c7b224eee76f08909e8p4@HRH2
2.39e-66FFCP PHASE1:Hg19::chr2:42043637..42043640,-#_556b3676c64e4c7b224eee76f08909e8p@chr2:42043637..42043640, -
2.39e-66FFCP PHASE1:Hg19::chr1:203150041..203150049,-#_556b3676c64e4c7b224eee76f08909e8p@chr1:203150041..203150049, -
2.39e-66FFCP PHASE2:Hg19::chr3:135043585..135043591,-#_556b3676c64e4c7b224eee76f08909e8p@chr3:135043585..135043591, -
2.39e-66FFCP PHASE1:Hg19::chr18:40200823..40200829,+#_556b3676c64e4c7b224eee76f08909e8p@chr18:40200823..40200829, +
2.39e-66FFCP PHASE2:Hg19::chr19:44414731..44414733,+#_556b3676c64e4c7b224eee76f08909e8p@chr19:44414731..44414733, +
2.39e-66FFCP PHASE1:Hg19::chr2:238859791..238859796,-#_556b3676c64e4c7b224eee76f08909e8p@chr2:238859791..238859796, -
2.39e-66FFCP PHASE2:Hg19::chr19:7795730..7795740,-#_556b3676c64e4c7b224eee76f08909e8p5@CLEC4G
2.39e-66FFCP PHASE2:Hg19::chr7:54897467..54897468,-#_556b3676c64e4c7b224eee76f08909e8p@chr7:54897467..54897468, -
2.39e-66FFCP PHASE1:Hg19::chr1:1154360..1154365,-#_556b3676c64e4c7b224eee76f08909e8p@chr1:1154360..1154365, -
2.39e-66FFCP PHASE1:Hg19::chr8:127508635..127508640,+#_556b3676c64e4c7b224eee76f08909e8p@chr8:127508635..127508640, +
2.39e-66FFCP PHASE2:Hg19::chr10:54464025..54464030,+#_556b3676c64e4c7b224eee76f08909e8p@chr10:54464025..54464030, +
2.39e-66FFCP PHASE1:Hg19::chr5:150006500..150006508,-#_556b3676c64e4c7b224eee76f08909e8p@chr5:150006500..150006508, -
2.39e-66FFCP PHASE1:Hg19::chr10:54464025..54464030,+#_556b3676c64e4c7b224eee76f08909e8p@chr10:54464025..54464030, +
4.66e-66FFCP PHASE1:Hg19::chr4:88042092..88042099,-#_514248e4277e67519dd474557cedabb7p@chr4:88042092..88042099, -
4.66e-66FFCP PHASE1:Hg19::chr21:40459334..40459341,+#_514248e4277e67519dd474557cedabb7p@chr21:40459334..40459341, +
4.66e-66FFCP PHASE2:Hg19::chr4:88042092..88042099,-#_514248e4277e67519dd474557cedabb7p@chr4:88042092..88042099, -
4.66e-66FFCP PHASE2:Hg19::chr10:37485037..37485044,+#_514248e4277e67519dd474557cedabb7p@chr10:37485037..37485044, +
4.66e-66FFCP PHASE1:Hg19::chr10:37485037..37485044,+#_514248e4277e67519dd474557cedabb7p@chr10:37485037..37485044, +
4.66e-66FFCP PHASE2:Hg19::chr2:16526810..16526812,-#_514248e4277e67519dd474557cedabb7p@chr2:16526810..16526812, -
4.66e-66FFCP PHASE2:Hg19::chr8:135501299..135501346,-#_514248e4277e67519dd474557cedabb7p@chr8:135501299..135501346, -
4.66e-66FFCP PHASE1:Hg19::chr1:11907265..11907271,-#_514248e4277e67519dd474557cedabb7p9@NPPA
4.66e-66FFCP PHASE2:Hg19::chr3:39233987..39233993,-#_514248e4277e67519dd474557cedabb7p14@XIRP1
4.66e-66FFCP PHASE1:Hg19::chr9:86211495..86211499,-#_514248e4277e67519dd474557cedabb7p1@ENST00000362613
4.66e-66FFCP PHASE2:Hg19::chr1:11905799..11905806,-#_514248e4277e67519dd474557cedabb7p@chr1:11905799..11905806, -
4.66e-66FFCP PHASE2:Hg19::chr21:40459334..40459341,+#_514248e4277e67519dd474557cedabb7p@chr21:40459334..40459341, +
4.66e-66FFCP PHASE1:Hg19::chr8:135501299..135501346,-#_514248e4277e67519dd474557cedabb7p@chr8:135501299..135501346, -
4.66e-66FFCP PHASE1:Hg19::chr2:16526810..16526812,-#_514248e4277e67519dd474557cedabb7p@chr2:16526810..16526812, -
4.66e-66FFCP PHASE2:Hg19::chr13:25345488..25345491,+#_514248e4277e67519dd474557cedabb7p@chr13:25345488..25345491, +
4.66e-66FFCP PHASE2:Hg19::chr1:11907265..11907271,-#_514248e4277e67519dd474557cedabb7p9@NPPA
4.66e-66FFCP PHASE1:Hg19::chr13:25345488..25345491,+#_514248e4277e67519dd474557cedabb7p@chr13:25345488..25345491, +
4.66e-66FFCP PHASE1:Hg19::chr3:39233987..39233993,-#_514248e4277e67519dd474557cedabb7p14@XIRP1

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0002134&oldid=3277386"