FFCP PHASE1:Hg19::chr10:116582671..116582715,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:116582671..116582715,- to FFCP PHASE1:Hg19::chr10:116582671..116582715,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:116582671..116582715,- | |||
|description=CAGE_peak_at_chr10:116582671..116582715,- | |||
|id=chr10:116582671..116582715,- | |||
|ontology_enrichment_celltype=CL:0000057!3.95e-10!75;CL:0000136!3.52e-09!15;CL:0000048!7.35e-09!430;CL:0000723!2.04e-08!436;CL:0000055!7.84e-08!180;CL:0000034!1.30e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.79e-12;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,3.16e-13,15;CL:0000048,2.89e-10,427;CL:0000723,6.38e-10,433;CL:0000057,7.39e-10,76;CL:0000034,2.15e-09,441;CL:0002320,7.01e-08,361;CL:0000134,3.27e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.23e-08;9!UBERON:0000042;4.23e-08;9!UBERON:0003688;2.08e-07;6!UBERON:0002358;2.08e-07;6!UBERON:0003684;2.08e-07;6!UBERON:0001178;2.08e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.57e-08,371;UBERON:0003688,2.04e-07,6;UBERON:0002358,2.04e-07,6;UBERON:0003684,2.04e-07,6;UBERON:0001178,2.04e-07,6 | |||
|phase1_expression=12.5358081696684,7.49351833618441,16.7735740874206,5.00366491765652,10.7270662662549,6.10636966870258,10.1319951267324,1.26343974685366,6.26845507679612,0,0,0,0,1.8564952944007,2.65117900582333,0.672325146451775,0,0,0.975865597581014,0,0.408001382488506,0.313454721478088,0,0,0.125542639594803,0,0.164201178899891,0.157421562627358,3.54027849164014,2.68680578668049,0.619264493264304,0,0,0.369754010166788,0.0774672005803016,0,2.05520307534393,1.66198622559563,1.00272223735071,0.434021741431704,0.447830948479849,0.971680998056939,0.515151135268373,0.726991193897824,0.377875943688809,0.970336244751265,0.464858073811369,0,0.619412741790207,5.75384784644301,2.56160706529101,2.60130452877444,0,0,0,0.941211697713023,0,0,0.918251677112708,0.641858054152187,0,6.92687730392104,6.18337338627059,4.68847225585964,2.03146467040009,0,0,6.28121663141858,2.60741459210101,4.34377689410233,4.84319602106695,1.47311054395026,0.316462387440884,0.422510572623884,0.425208599930087,0.419317291016752,0.561643155732475,0.600707571366025,0.803627933485401,0.570025487482497,0.39783335439818,1.0959849225878,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.526768169550154,0.393419540227666,0,0.205601498999509,0.334372990781356,0,0.473447805734733,0,0.222820913770347,0.883817722424512,0.664601683750863,0.812411591295047,0.384273959177026,0.910415432919148,0,0,0.289803085735052,0,0.267540828089713,0,0,1.14966148080576,0.34362744548263,0.253019692019503,0.637130828648193,0,0,0.150575119077773,0,0,0,0,0.80642697289893,0.534880391567015,0.289648807765598,17.0664806419773,0.670700859703636,0.511450247374121,5.42158728576849,8.52274448081012,12.1671075927092,0.795285947051099,0.973269740605272,0,0,0,1.17881167947941,0,0,0.324547393654683,0.174129737299267,0,0,0,0.371457501329565,0.198762407366705,0,0,0,0.419499436209906,0,0.417989933073621,0,0,0.66944122552934,0.402829317109147,0,0,0,0,0,0,0,0,0,0,1.31780417436063,27.1446184903828,0,2.98183171017191,3.03913227994991,20.9206505684886,6.88407889797153,1.06400514659507,1.12135520028461,1.06748995729705,0.98667019366864,0.622422070799533,1.34710672069688,0.490385709340376,0.454072282934794,0.576175924479999,0.234321431833797,0.624320153660641,0.570471821544449,0.149448680551801,0,0,0.140450806702248,2.65400422631361,0.368502951935304,1.75653827998801,5.94001428641027,3.95627086845691,3.64064544775211,2.87447256726495,0.168336113954066,0.125118519871964,1.10825646193673,3.07284334616587,5.21029252858333,3.75595147266492,0.453728732640084,5.202299434977,5.97960688691989,2.11931901159562,2.40072876867522,3.60683852334536,5.15281080091258,2.41951913231067,0.506328996723799,0.876933046450788,4.03894038790583,6.07529331039176,10.6686397500416,4.26011511019937,1.61203357164224,1.18692414617341,0.386521706326594,0.272746120590835,0.286804595389004,0,0,0,0,0,0,1.56449532329816,3.21620469096443,4.14404764057442,9.28735856063958,7.94067429836544,0.473227200159376,1.01150814046861,0.964044119533928,0.55146986366197,0,0.237270619111097,0.404493924480493,0.98110732562673,0.38474715694639,0,0,0.8231480226628,0,8.87285243752816,0.982827216677626,7.08947888017685,0,0.245976877086227,0.514703430895577,0.219500570817251,1.1240175325762,0,0.0925884451585296,0.325808305310325,0,1.44331342025273,0,1.05667824812239,1.29929802984966,1.38895653772983,0.380508304469197,3.1608175918371,4.29243081047436,0,0.234004265139238,0.148631162288728,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,1.80980402060889,3.57656445851882,0,3.45719551560332,2.08014873822732,0.257207374262142,0,0,3.0025378668211,0.542621605391443,0,0,3.19852753868291,0,5.12446941001296,3.48613383440118,1.3996218765488,0,0,0,7.42837052023906,3.44585807502342,0,3.61953266668948,2.4657158706046,0.537182889719687,0,0.197030760201927,0.215627574859517,0.256686072559497,0.254094624222463,0,0,0.167516265334349,0,7.49007023947182,2.99161459204025,19.0631136180576,4.2942022101699,1.50051156317903,0,12.6862225533792,16.2370379805417,10.8814666373415,11.831282914264,0.902838299183157,0,0,0,0.368738337083406,3.38846096425523,0,0.343143423810856,0.413536052245775,0.215714200818617,0.106727557803444,1.21251028578504,0,0.604780586659361,4.21783273291921,4.45039722535381,2.24528075546459,11.6606625822688,8.18731598506726,3.69964018630297,1.48418066444991,0.154209693802656,0,0.0821271560138091,1.03850885836724,0,0,0.200506470303285,0,6.19998020088876,4.37018803216121,9.04758463220026,0,0.0770153371044148,0,0,0,0,0,0,3.08454505380579,0,0.501689773854853,0,0,0,5.7007567927943,4.70583811844821,0,0.328014645699706,0,2.7821073144885,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.386682873168488,0.154048617114644,0.307007349452259,0.137836572484531,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.826424576804891,0.192190067365106,0.255225424989168,0.4046311234222,1.39453664789186,4.09256050879832,0,1.23213432070436,1.06461206063404,0.869932992075073,0,2.57624796135584,0.744316738719335,1.89827654831236,1.33441135746677,0.2558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| ||
|short_description=p@chr10:116582671..116582715,- | |||
}} | }} |
Latest revision as of 10:42, 23 July 2015
Short description: | p@chr10:116582671..116582715, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:116582671..116582715, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 3.16e-13 | 15 |
multi fate stem cell | 2.89e-10 | 427 |
somatic stem cell | 6.38e-10 | 433 |
fibroblast | 7.39e-10 | 76 |
stem cell | 2.15e-09 | 441 |
connective tissue cell | 7.01e-08 | 361 |
mesenchymal cell | 3.27e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.57e-08 | 371 |
omentum | 2.04e-07 | 6 |
peritoneum | 2.04e-07 | 6 |
abdominal cavity | 2.04e-07 | 6 |
visceral peritoneum | 2.04e-07 | 6 |