FFCP PHASE1:Hg19::chr10:86001294..86001304,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26103 | |EntrezGene=26103 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23404 | |HGNC=23404 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_uc001kda.1_5end | |||
|cluster_id=chr10:86001294..86001304,- | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_2_at_LRIT1_5end | |||
|id=chr10:86001294..86001304,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.12e-17;3 | |||
|ontology_enrichment_disease=DOID:5409!2.26e-08!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!1.13e-57!2;UBERON:0002757!1.13e-57!2;UBERON:0010134!1.13e-57!2;UBERON:0002784!1.13e-57!2;UBERON:0005408!1.13e-57!2;UBERON:0001899!1.13e-57!2;UBERON:0003296!1.78e-29!4;UBERON:0010133!1.78e-29!4;UBERON:0000966!2.02e-23!5;UBERON:0005388!2.02e-23!5;UBERON:0001802!2.02e-23!5;UBERON:0001894!2.46e-17!7;UBERON:0006222!2.46e-17!7;UBERON:0002360!2.37e-15!2;UBERON:0000094!2.37e-15!2;UBERON:0007645!2.37e-15!2;UBERON:0000970!2.01e-13!20;UBERON:0002104!8.05e-13!21;UBERON:0000020!9.05e-12!23;UBERON:0001032!2.61e-11!24;UBERON:0004456!2.61e-11!24;UBERON:0003075!1.84e-08!86;UBERON:0007284!1.84e-08!86;UBERON:0005743!2.27e-08!86;UBERON:0002346!4.21e-08!90;UBERON:0003056!8.30e-08!61;UBERON:0000073!1.29e-07!94;UBERON:0001016!1.29e-07!94;UBERON:0000019!6.77e-07!19;UBERON:0000047!6.77e-07!19;UBERON:0004088!6.77e-07!19;UBERON:0003072!6.77e-07!19;UBERON:0003071!6.77e-07!19;UBERON:0004128!6.77e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.68e-99;2!UBERON:0002757;5.68e-99;2!UBERON:0010134;5.68e-99;2!UBERON:0005408;5.68e-99;2!UBERON:0001899;5.68e-99;2!UBERON:0003296;3.11e-50;4!UBERON:0010133;3.11e-50;4!UBERON:0002784;3.11e-50;4!UBERON:0001894;2.74e-29;7!UBERON:0000966;3.60e-11;5!UBERON:0005388;3.60e-11;5!UBERON:0001802;3.60e-11;5!UBERON:0000970;6.30e-11;20!UBERON:0002104;1.86e-10;21!UBERON:0000020;1.22e-09;23!UBERON:0001032;2.78e-09;24!UBERON:0004456;2.78e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,5.68e-99,2;UBERON:0002757,5.68e-99,2;UBERON:0010134,5.68e-99,2;UBERON:0005408,5.68e-99,2;UBERON:0001899,5.68e-99,2;UBERON:0003296,3.11e-50,4;UBERON:0010133,3.11e-50,4;UBERON:0002784,3.11e-50,4;UBERON:0001894,2.74e-29,7;UBERON:0006222,2.74e-29,7;UBERON:0000970,1.86e-10,21;UBERON:0002104,1.86e-10,21;UBERON:0000966,1.57e-09,6;UBERON:0005388,1.57e-09,6;UBERON:0001802,1.57e-09,6;UBERON:0000020,2.78e-09,24;UBERON:0001032,2.78e-09,24;UBERON:0004456,2.78e-09,24;UBERON:0003056,4.39e-08,61;UBERON:0002368,9.98e-07,35 | |||
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|short_description=p2@LRIT1 | |||
}} | }} |
Latest revision as of 16:54, 19 September 2015
Short description: | p2@LRIT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRIT1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 33bp_to_uc001kda.1_5end |
EntrezGene: | LRIT1 |
HGNC: | 23404 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 5.68e-99 | 2 |
regional part of epithalamus | 5.68e-99 | 2 |
secretory circumventricular organ | 5.68e-99 | 2 |
circumventricular organ | 5.68e-99 | 2 |
epithalamus | 5.68e-99 | 2 |
gland of diencephalon | 3.11e-50 | 4 |
neuroendocrine gland | 3.11e-50 | 4 |
regional part of diencephalon | 3.11e-50 | 4 |
diencephalon | 2.74e-29 | 7 |
future diencephalon | 2.74e-29 | 7 |
eye | 1.86e-10 | 21 |
visual system | 1.86e-10 | 21 |
retina | 1.57e-09 | 6 |
photoreceptor array | 1.57e-09 | 6 |
posterior segment of eyeball | 1.57e-09 | 6 |
sense organ | 2.78e-09 | 24 |
sensory system | 2.78e-09 | 24 |
entire sense organ system | 2.78e-09 | 24 |
pre-chordal neural plate | 4.39e-08 | 61 |
endocrine gland | 9.98e-07 | 35 |