FFCP PHASE1:Hg19::chr11:111412445..111412478,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:111412445..111412478,- to FFCP PHASE1:Hg19::chr11:111412445..111412478,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK096925_5end | |||
|cluster_id=chr11:111412445..111412478,- | |||
|description=CAGE_peak_1_at_AK096925_5end | |||
|id=chr11:111412445..111412478,- | |||
|ontology_enrichment_celltype=CL:0000055!1.49e-25!180;CL:0000057!3.34e-20!75;CL:0002620!4.61e-08!23;CL:0000144!1.29e-07!625;CL:0000077!6.70e-07!19;CL:0000680!9.16e-07!57;CL:0000056!9.16e-07!57;CL:0000355!9.16e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002620;9.81e-08;23!CL:0000349;1.34e-07;19!CL:0000346;5.73e-07;3!CL:1000428;5.73e-07;3!CL:0000064;6.08e-07;3!CL:0000067;6.08e-07;3!CL:0005012;6.08e-07;3!CL:0002304;6.08e-07;3!CL:0002559;6.61e-07;5!CL:0000134;8.91e-07;55!CL:0000723;9.01e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.51e-11,76;CL:0002620,1.23e-07,23;CL:0000349,1.47e-07,19;CL:0000346,4.14e-07,3;CL:1000428,4.14e-07,3;CL:0002559,4.85e-07,5;CL:0000064,5.92e-07,3;CL:0000067,5.92e-07,3;CL:0005012,5.92e-07,3;CL:0002304,5.92e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.06e-09;5!DOID:450;2.06e-09;5!DOID:66;2.06e-09;5!DOID:423;2.06e-09;5!DOID:0080000;2.06e-09;5!DOID:11722;2.06e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.88e-09,5;DOID:450,1.88e-09,5;DOID:66,1.88e-09,5;DOID:423,1.88e-09,5;DOID:0080000,1.88e-09,5;DOID:11722,1.88e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.40e-11!83;UBERON:0002329!7.40e-11!83;UBERON:0003077!7.40e-11!83;UBERON:0003059!7.40e-11!83;UBERON:0007282!7.40e-11!83;UBERON:0009618!7.40e-11!83;UBERON:0007285!7.40e-11!83;UBERON:0000475!1.61e-09!365;UBERON:0003102!4.82e-09!95;UBERON:0004290!2.11e-07!70;UBERON:0002097!2.49e-07!40;UBERON:0005256!3.76e-07!143;UBERON:0002199!6.49e-07!45;UBERON:0002416!6.49e-07!45;UBERON:0007625!8.91e-07!11;UBERON:0000486!9.31e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.16e-08;41!UBERON:0000412;5.73e-07;3!UBERON:0001992;5.73e-07;3!UBERON:0001778;6.08e-07;3!UBERON:0001775;6.08e-07;3!UBERON:0002073;6.61e-07;5!UBERON:0000478;8.52e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.93e-10,41;UBERON:0002199,8.48e-09,46;UBERON:0002416,8.48e-09,46;UBERON:0005631,3.66e-07,14;UBERON:0000158,3.66e-07,14;UBERON:0000412,4.14e-07,3;UBERON:0001992,4.14e-07,3;UBERON:0002073,4.85e-07,5;UBERON:0005086,4.85e-07,5;UBERON:0001778,5.92e-07,3;UBERON:0001775,5.92e-07,3;UBERON:0000478,9.45e-07,24 | |||
|phase1_expression=0,0.856402095563933,0.140954404095971,1.0007329835313,0.446961094427288,0.872338524100369,0,0.631719873426831,0,0.982935746006035,1.39560233594486,0.436882744260345,0.263766978228454,0.618831764800233,0.662794751455832,0.672325146451775,0,0.730310090387373,0,1.60057375499824,1.83600622119828,1.56727360739044,0.85870796139317,0.684372125364421,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,1.00267582127178,0.869079113764942,0,0,3.78139268656271,2.21729397462564,2.28370442802128,0.327447688744282,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.379891534993739,0.397227542439656,0.860509862246441,0,0.560677600142307,0,0.98667019366864,0.311211035399766,0,0,0.302714855289863,0.576175924479999,0.234321431833797,0,0.570471821544449,0,0.23486899728753,0.161872944368132,0,0.204154171254893,0.245668634623536,0.413303124703062,3.56400857184616,0.989067717114227,0.910161361938026,2.15585442544872,0.505008341862199,0.500474079487857,0.554128230968366,3.95079858792754,3.37136575378922,2.10333282469236,0,2.87023417102179,5.55249210928275,1.48352330811693,1.20036438433761,1.23663035086127,1.03056216018252,0.744467425326359,0.168776332241266,0.487185025805993,2.27190396819703,3.12969655383818,0.323292113637624,2.13005755509969,1.20902517873168,2.88253006927829,0,0.272746120590835,0,0,0.132529768321485,0,0.518305275076852,0,0,1.56449532329816,5.78916844373597,4.14404764057442,2.3218396401599,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,2.94017422771084,0,0,0,0,0,0.857839051492628,1.31700342490351,0,0,0.185176890317059,0.325808305310325,0,1.44331342025273,0.231860809950154,2.34817388471643,0.433099343283221,0,0,0,0,0,0,0,0,0,1.13420077793909,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0.336393253036082,0,0.07333828582095,0.258543431515556,0,0,0,1.04007436911366,1.28603687131071,0,0.532844358032199,1.14382394926518,1.08524321078289,1.64648067356154,0,1.06617584622764,0,1.50719688529793,0.871533458600294,0.399891964728228,0,0,2.10833939483032,0.958499421966331,1.14861935834114,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0,0,2.49565033836969,2.3195768543631,2.05013139544115,0.819989904948992,1.50473049863859,0,0,0,2.21243002250044,1.21637060255316,0.195801157462741,0,0,0,0,0,1.66435439510497,0.907170879989041,0.992431231275107,1.38115775959256,1.68396056659844,0.128139149255701,3.07024349440022,0.321707842287215,1.48418066444991,0.771048469013278,0,0.328508624055237,0,0.348631135379878,0,0.200506470303285,0.184161977871793,0.459257792658427,1.45672934405374,1.04899531967539,0,0.616122696835318,0,0,0.422206515571503,0,0,0.215915916102139,1.54227252690289,0.270946437543853,1.00337954770971,0,0,0.223874754722178,0,0,0.769350375349168,0.984043937099117,0,0,0,0,0,1.30012049207304,0,0.290012154876366,0.616194468458578,0,0.275673144969061,0.966782203814463,1.16013355131383,0.511359764496605,1.51354460599453,0.330569830721956,0.192190067365106,0,0.2023155617111,0.464845549297286,0.31481234683064,0,0.924100740528266,0,0,0.18532421910392,0.572499546967965,1.116475108079,0.949138274156178,2.2875623270859,1.27948895655667,0,0.95460974377781,0.78494864019923,3.05783177891635,1.37268514868027,1.06031162111118,0.202182481573316,0,0.421258456238981,4.38870365180631,0.243713489631284,1.05650146756755,0.9554993798559,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,1.14729081763241,3.04572027140676,0,0,0,0,0,0.349934720244983,0.192444225451024,0,0,0.188287601553558,0,1.68471475667626,0,0.229723400206959,0,0,0,0,0,0,0,0,8.43910161907038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,1.43246690842614,2.67268212749375,0.921482106297696,0,0.140669416410513,0.445234820091624,0,0,0,0.552567831062295,0,3.68167257007757,0,1.86623752597084,0.359473404589307,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0.922255617552241,0,0.325942115766024,1.27600463892768,2.01514705484097,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,1.78154502040776,0,0.0633107959558787,0,0,0,0,0,2.29073192331831,0,0,0.248505071130865,0,0.815425236441684,1.15063130943567,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0.229160424011684,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0,0.482259445395058,0.412618309791701,0,0,0,0,0,0,0.0524545881349981,0.105600336519406,0,0.191915197319445,0.714695326373367,0,0,0,0,0,3.59190574687462,0,2.04465626142506,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0.467426619694449,0,1.136418031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| ||
|short_description=p1@AK096925 | |||
}} | }} |
Latest revision as of 18:05, 23 July 2015
Short description: | p1@AK096925 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK096925_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK096925_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.51e-11 | 76 |
skin fibroblast | 1.23e-07 | 23 |
extraembryonic cell | 1.47e-07 | 19 |
hair follicle dermal papilla cell | 4.14e-07 | 3 |
stem cell of epidermis | 4.14e-07 | 3 |
hair follicle cell | 4.85e-07 | 5 |
ciliated cell | 5.92e-07 | 3 |
ciliated epithelial cell | 5.92e-07 | 3 |
multi-ciliated epithelial cell | 5.92e-07 | 3 |
non-pigmented ciliary epithelial cell | 5.92e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.93e-10 | 41 |
integument | 8.48e-09 | 46 |
integumental system | 8.48e-09 | 46 |
extraembryonic membrane | 3.66e-07 | 14 |
membranous layer | 3.66e-07 | 14 |
dermal papilla | 4.14e-07 | 3 |
papillary layer of dermis | 4.14e-07 | 3 |
hair follicle | 4.85e-07 | 5 |
hair follicle placode | 4.85e-07 | 5 |
ciliary epithelium | 5.92e-07 | 3 |
ciliary body | 5.92e-07 | 3 |
extraembryonic structure | 9.45e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.88e-09 | 5 |
myotonic disease | 1.88e-09 | 5 |
muscle tissue disease | 1.88e-09 | 5 |
myopathy | 1.88e-09 | 5 |
muscular disease | 1.88e-09 | 5 |
myotonic dystrophy | 1.88e-09 | 5 |