FFCP PHASE1:Hg19::chr11:2016960..2016996,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:2016960..2016996,- to FFCP PHASE1:Hg19::chr11:2016960..2016996,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=283120 | |EntrezGene=283120 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4713 | |HGNC=4713 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-157bp_to_BC010185_5end | |||
|cluster_id=chr11:2016960..2016996,- | |||
|coexpression_cluster_id=C227 | |||
|description=CAGE_peak_20_at_H19_5end | |||
|id=chr11:2016960..2016996,- | |||
|ontology_enrichment_celltype=CL:0000188!3.42e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.51e-18;19!CL:0002577;6.13e-08;3!CL:0002541;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.43e-18,19;CL:0002577,6.15e-08,3;CL:0002541,7.70e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;7.47e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.47e-12!14;UBERON:0000158!1.47e-12!14;UBERON:0001557!3.73e-12!19;UBERON:0000478!4.71e-12!24;UBERON:0003104!1.25e-11!238;UBERON:0009142!1.25e-11!238;UBERON:0001737!8.16e-11!9;UBERON:0004119!1.75e-10!169;UBERON:0000925!1.75e-10!169;UBERON:0006595!1.75e-10!169;UBERON:0004921!9.21e-10!129;UBERON:0004185!9.21e-10!129;UBERON:0000077!1.15e-09!130;UBERON:0003124!1.72e-09!7;UBERON:0000481!2.73e-09!347;UBERON:0001007!7.20e-09!155;UBERON:0001555!7.20e-09!155;UBERON:0007026!7.20e-09!155;UBERON:0001041!7.53e-09!98;UBERON:0004923!1.37e-07!57;UBERON:0003103!8.48e-07!69;UBERON:0000468!9.30e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.26e-18;24!UBERON:0001737;2.43e-18;9!UBERON:0001557;2.43e-18;9!UBERON:0005631;1.51e-14;10!UBERON:0000158;1.51e-14;10!UBERON:0001134;4.60e-11;16!UBERON:0002036;4.60e-11;16!UBERON:0001987;8.24e-10;4!UBERON:0000305;1.01e-08;7!UBERON:0000922;2.62e-08;49!UBERON:0003124;7.02e-08;3!UBERON:0000920;7.02e-08;3!UBERON:0001723;1.20e-07;3!UBERON:0001033;1.20e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.96e-22,14;UBERON:0000158,1.96e-22,14;UBERON:0000478,1.22e-18,24;UBERON:0001737,2.18e-18,9;UBERON:0003124,5.57e-16,7;UBERON:0001557,3.08e-14,19;UBERON:0001987,8.00e-10,4;UBERON:0004340,8.00e-10,4;UBERON:0004119,1.75e-09,160;UBERON:0000925,1.75e-09,160;UBERON:0006595,1.75e-09,160;UBERON:0004921,2.09e-09,118;UBERON:0001041,2.72e-09,87;UBERON:0000305,1.01e-08,7;UBERON:0000920,7.70e-08,3;UBERON:0000072,7.88e-08,47;UBERON:0001723,1.12e-07,3;UBERON:0001033,1.12e-07,3;UBERON:0010056,1.12e-07,3;UBERON:0004871,1.48e-07,8;UBERON:0001007,1.71e-07,145;UBERON:0001555,1.71e-07,145;UBERON:0007026,1.71e-07,145;UBERON:0000065,3.48e-07,54 | |||
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|phase1_expression=1.2717486548939,0.428201047781966,0,1.0007329835313,0.446961094427288,3.48935409640147,0,0,0,0.491467873003018,0.697801167972428,14.1986891884612,8.96807725976742,0.123766352960047,0.331397375727916,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0.77408061658038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,1.34140171940727,0,0,0.50133791063589,0,0,4.86634870302636,0.189069634328136,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,1.68203280042692,0,0,0.311211035399766,0,0,1.21085942115945,2.30470369792,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0.829288440122964,0,0,0,0,0,0,0,4.25904480143438,4.38320194203064,2.89213235860178,4.74264082749294,3.4860711054785,5.69449485866632,5.52808363456674,3.72820783738158,5.77120735419586,0.738155454624648,0,2.8810180793198,8.82052268313252,1.26755034821831,0,1.77236972004421,0,0,0,0,0,0,1.20364978706088,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,20.6196210048748,0.823240336780769,0,0,1.58390374586686,0,0,0,0,0,0,0,0,1.42636905040718,1.73737568001095,0.821905290201534,2.32779252211864,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.613457458595699,0.500170521059677,0.271265023699736,0,0,0,0,0,0,0,0,0,0,10.573262502988,13.3825935286234,0,0,0,12.7313580007429,19.9722527412596,11.4908311465279,1.73675465473144,0.153461973288062,0.561320188866147,0.384417447767103,0,0.804269605718038,2.96836132889982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647747748306418,1.54227252690289,0,0,0,0.831076008928724,0,0,0,0,0,0,0.412164046590889,0,0,0,0,0,0.773365746336976,0.770243085573222,1.22802939780904,1.10269257987624,0.214840489736547,0.580066775656914,0.852266274161009,3.56128142586949,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0.632758849437452,0,0,7.70290178461057,0,0,0.179872457583315,0,0,0.202182481573316,0,0,0.975267478179181,0,0,0,0,0,0,0,0,0,1.9676842561399,0,0,0,0.143411352204052,0.88424136911809,0,0,0.211107635297664,0,0,0.349934720244983,0,0,0,1.12972560932135,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,73.7720457839462,31.7752208490923,120.0998345208,0,0,0,0,0,0.19924798825107,0.552567831062295,1.51159648712566,0,0,0,0,0,0,1.87422470710174,0,0,0,0,0,0,0,0,0,0,1.41832609060762,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,2.69272933229316,4.34589487688032,41.7891519248815,3.11431817566332,76.7570077466834,0,0,0,0.676786981851542,0.588187602953219,0.335643173951685,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0.296521128680622,0,0,0,80.2577647298789,0,0,0,0,0.394584402849391,7.25944296291983,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0.290967049465258,0.0882561266915003,2.25980740780532,0,0,0,0.195551382734803,0,0,22.5784858827807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0,0,0.199679000498991,1.28767814440971,0.223171457441873,2.68733889946905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394028536495991,2.09818352539992,0,0,0,0.714695326373367,1.98627591109629,0.25426853765475,0,0,0,0,0,0,0,0.879313402068495,42.4022044519108,0,0,0,0,0.106787412567695,1.10043013569766,0.414239055347196,0,0,0,0,0.544017803369474,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.200360940621,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86623178009892,0.127894371303652,4.52864207866064,0,0.764467467344097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.353909170043221,0.550285795565037,8.31784796282435,0,0,0,0.376051641746286,0,0,16.2382150578482,0,1.18284868973636,0,0,0,0,0,0,3.47347824872506,0,0.127762427639595,0,0,0,0,4.70122561861986,0,0.685952037749674,0,0,0,0,0.39246546425257,0,17.3768741254549,14.6105395281519,0,0,0.142953088353313,0,0,0,0,0,0,1.38251932362818,0,0,0,0.846774100381858,2.52017555398455,0,0,0,0,0,15.5382920925095,2.25858175083743,5.799072156691,4.37139893753226,0,0,0,0,0,0,0,2.40415516554353,0,0.490296643507811,0,0,0,2.113278637917,0,0.187967835959707,1.16024198352439,0,1.42843150884526,0,0,7.30336388246517,0.458729283404541,0,0.631086248772738,0,0,14.2837246939158,0,0,3.46101249699031,0,0.437062287854782,0,0,0,0.0918948995348449,0,0.227336094654718,0,0,0,1.91910583710883,6.90386851244847,0.0645889098360061,0.434523000071005,0,0.190941474834495,7.07410161353767,3.9189014621453,21.5606979683727,0.134704106029175,0.286888821570705,3.65926392200615,0.325613074443898,0,0,0,14.0784565442073,0.366724332548599,1.62758471326295,0,0.201273793591026,0 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|short_description=p20@H19 | |||
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Latest revision as of 06:17, 17 September 2015
Short description: | p20@H19 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_H19_5end |
Coexpression cluster: | C227_chorionic_amniotic_Mesenchymal_Placental_gastric_diaphragm_tongue |
Association with transcript: | -157bp_to_BC010185_5end |
EntrezGene: | H19 |
HGNC: | 4713 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.43e-18 | 19 |
placental epithelial cell | 6.15e-08 | 3 |
chorionic membrane mesenchymal stem cell | 7.70e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.96e-22 | 14 |
membranous layer | 1.96e-22 | 14 |
extraembryonic structure | 1.22e-18 | 24 |
larynx | 2.18e-18 | 9 |
chorion | 5.57e-16 | 7 |
upper respiratory tract | 3.08e-14 | 19 |
placenta | 8.00e-10 | 4 |
allantois | 8.00e-10 | 4 |
endoderm-derived structure | 1.75e-09 | 160 |
endoderm | 1.75e-09 | 160 |
presumptive endoderm | 1.75e-09 | 160 |
subdivision of digestive tract | 2.09e-09 | 118 |
foregut | 2.72e-09 | 87 |
amnion | 1.01e-08 | 7 |
egg chorion | 7.70e-08 | 3 |
segment of respiratory tract | 7.88e-08 | 47 |
tongue | 1.12e-07 | 3 |
gustatory system | 1.12e-07 | 3 |
future tongue | 1.12e-07 | 3 |
somatic layer of lateral plate mesoderm | 1.48e-07 | 8 |
digestive system | 1.71e-07 | 145 |
digestive tract | 1.71e-07 | 145 |
primitive gut | 1.71e-07 | 145 |
respiratory tract | 3.48e-07 | 54 |