FFCP PHASE1:Hg19::chr12:11085407..11085416,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:11085407..11085416,+ to FFCP PHASE1:Hg19::chr12:11085407..11085416,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:11085407..11085416,+ | |||
|coexpression_cluster_id=C70 | |||
|description=CAGE_peak_at_chr12:11085407..11085416,+ | |||
|id=chr12:11085407..11085416,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.46e-50;1!UBERON:0006298;2.42e-50;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001829!1.13e-57!2;UBERON:0003127!8.47e-57!2;UBERON:0001044!4.86e-43!6;UBERON:0003293!4.86e-43!6;UBERON:0003294!4.86e-43!6;UBERON:0010047!4.86e-43!6;UBERON:0000167!4.86e-43!6;UBERON:0001831!7.48e-30!1;UBERON:0001567!7.48e-30!1;UBERON:0008801!7.48e-30!1;UBERON:0001736!9.99e-30!1;UBERON:0006298!9.99e-30!1;UBERON:0003408!3.30e-26!10;UBERON:0000078!1.19e-25!18;UBERON:0000166!4.41e-22!21;UBERON:0003126!4.36e-17!7;UBERON:0001005!4.36e-17!7;UBERON:0000165!1.03e-16!28;UBERON:0000930!1.03e-16!28;UBERON:0004089!1.15e-15!2;UBERON:0000341!2.05e-15!2;UBERON:0001004!2.11e-14!72;UBERON:0000161!1.75e-13!35;UBERON:0001723!8.99e-11!3;UBERON:0001033!8.99e-11!3;UBERON:0010056!8.99e-11!3;UBERON:0001041!1.21e-10!98;UBERON:0001444!5.74e-10!48;UBERON:0007196!4.75e-09!14;UBERON:0001558!4.75e-09!14;UBERON:0002365!5.69e-09!31;UBERON:0002330!5.69e-09!31;UBERON:0000077!4.59e-08!130;UBERON:0004921!4.59e-08!129;UBERON:0004185!4.59e-08!129;UBERON:0000464!4.01e-07!104;UBERON:0001007!9.75e-07!155;UBERON:0001555!9.75e-07!155;UBERON:0007026!9.75e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;5.68e-99;2!UBERON:0001831;1.46e-50;1!UBERON:0001567;1.46e-50;1!UBERON:0001736;2.42e-50;1!UBERON:0001044;5.98e-34;6!UBERON:0003293;5.98e-34;6!UBERON:0003294;5.98e-34;6!UBERON:0010047;5.98e-34;6!UBERON:0003408;5.98e-34;6!UBERON:0000167;5.98e-34;6!UBERON:0004089;4.32e-26;2!UBERON:0003127;8.10e-26;2!UBERON:0001723;1.03e-17;3!UBERON:0001033;1.03e-17;3!UBERON:0000165;8.27e-17;28!UBERON:0001041;2.95e-15;14!UBERON:0000161;1.55e-11;19!UBERON:0000166;1.55e-11;19!UBERON:0003126;2.26e-08;7!UBERON:0001005;2.26e-08;7!UBERON:0002365;1.10e-07;31!UBERON:0002330;1.10e-07;31!UBERON:0001004;1.93e-07;65!UBERON:0001444;5.78e-07;48!UBERON:0000033;5.80e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,5.68e-99,2;UBERON:0001831,1.46e-50,1;UBERON:0001567,1.46e-50,1;UBERON:0008801,1.46e-50,1;UBERON:0001736,2.42e-50,1;UBERON:0006298,2.42e-50,1;UBERON:0001044,5.98e-34,6;UBERON:0003293,5.98e-34,6;UBERON:0003294,5.98e-34,6;UBERON:0010047,5.98e-34,6;UBERON:0000167,5.98e-34,6;UBERON:0004089,4.32e-26,2;UBERON:0003127,7.14e-26,2;UBERON:0000166,4.27e-21,22;UBERON:0003408,6.99e-21,10;UBERON:0001723,1.12e-17,3;UBERON:0001033,1.12e-17,3;UBERON:0010056,1.12e-17,3;UBERON:0000165,2.98e-16,29;UBERON:0000930,2.98e-16,29;UBERON:0000161,2.78e-13,36;UBERON:0001004,1.50e-11,74;UBERON:0001444,5.30e-10,49;UBERON:0001041,5.98e-10,87;UBERON:0000033,7.35e-09,56;UBERON:0003126,2.18e-08,7;UBERON:0001005,2.18e-08,7;UBERON:0000153,4.39e-08,62;UBERON:0007811,4.39e-08,62;UBERON:0004921,1.75e-07,118;UBERON:0002365,1.80e-07,31;UBERON:0002330,1.80e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.7024349440022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0,0,0,0,0,1.02669990325584,0,0.215166616178029,1.66330178273007,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.7024349440022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.7618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639701945702943,0,0,0,0,0,0,0,1.02669990325584,0,0.215166616178029,1.66330178273007,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:11085407..11085416,+ | |||
}} | }} |
Latest revision as of 04:53, 24 July 2015
Short description: | p@chr12:11085407..11085416, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:11085407..11085416, + |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 5.68e-99 | 2 |
parotid gland | 1.46e-50 | 1 |
cheek | 1.46e-50 | 1 |
parotid gland primordium | 1.46e-50 | 1 |
submandibular gland | 2.42e-50 | 1 |
submandibular gland primordium | 2.42e-50 | 1 |
saliva-secreting gland | 5.98e-34 | 6 |
gland of oral region | 5.98e-34 | 6 |
gland of foregut | 5.98e-34 | 6 |
oral gland | 5.98e-34 | 6 |
oral cavity | 5.98e-34 | 6 |
midface | 4.32e-26 | 2 |
open tracheal system trachea | 7.14e-26 | 2 |
oral opening | 4.27e-21 | 22 |
gland of gut | 6.99e-21 | 10 |
tongue | 1.12e-17 | 3 |
gustatory system | 1.12e-17 | 3 |
future tongue | 1.12e-17 | 3 |
mouth | 2.98e-16 | 29 |
stomodeum | 2.98e-16 | 29 |
orifice | 2.78e-13 | 36 |
respiratory system | 1.50e-11 | 74 |
subdivision of head | 5.30e-10 | 49 |
foregut | 5.98e-10 | 87 |
head | 7.35e-09 | 56 |
trachea | 2.18e-08 | 7 |
respiratory airway | 2.18e-08 | 7 |
anterior region of body | 4.39e-08 | 62 |
craniocervical region | 4.39e-08 | 62 |
subdivision of digestive tract | 1.75e-07 | 118 |
exocrine gland | 1.80e-07 | 31 |
exocrine system | 1.80e-07 | 31 |