FFCP PHASE1:Hg19::chr12:20521255..20521275,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr12:20521255..20521275,+ to FFCP PHASE1:Hg19::chr12:20521255..20521275,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:20521255..20521275,+ | |||
|coexpression_cluster_id=C2200 | |||
|description=CAGE_peak_at_chr12:20521255..20521275,+ | |||
|id=chr12:20521255..20521275,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002581;1.42e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,1.15e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.32e-13;29!UBERON:0010226;3.74e-10;1!UBERON:0005062;1.55e-09;4!UBERON:0007284;1.55e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;5.99e-18;2!DOID:178;1.42e-09;1!DOID:326;1.42e-09;1!DOID:3978;1.42e-09;1!DOID:3394;1.42e-09;1!DOID:5844;1.42e-09;1!DOID:1287;1.95e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.76e-18,2;DOID:178,8.91e-10,1;DOID:326,8.91e-10,1;DOID:3978,8.91e-10,1;DOID:3394,8.91e-10,1;DOID:5844,8.91e-10,1;DOID:1287,1.55e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.77e-14!9;UBERON:0000477!5.42e-11!286;UBERON:0007023!4.78e-10!115;UBERON:0000025!1.41e-09!194;UBERON:0004872!3.91e-09!84;UBERON:0007100!3.93e-08!27;UBERON:0001557!9.99e-08!19;UBERON:0000468!1.02e-07!659;UBERON:0001009!1.09e-07!113;UBERON:0001981!2.32e-07!60;UBERON:0007500!2.32e-07!60;UBERON:0004537!2.32e-07!60;UBERON:0006965!2.32e-07!60;UBERON:0003914!2.99e-07!118;UBERON:0004111!6.87e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.52e-32;9!UBERON:0001557;1.52e-32;9!UBERON:0002133;3.74e-18;2!UBERON:0007100;7.76e-16;25!UBERON:0004151;1.40e-12;3!UBERON:0003978;2.03e-12;3!UBERON:0000946;2.03e-12;3!UBERON:0002084;3.74e-10;1!UBERON:0002082;3.74e-10;1!UBERON:0002134;5.54e-10;1!UBERON:0005208;5.54e-10;1!UBERON:0004145;5.54e-10;1!UBERON:0005946;5.54e-10;1!UBERON:0005965;5.54e-10;1!UBERON:0002078;5.54e-10;1!UBERON:0002135;6.58e-10;1!UBERON:0000072;4.93e-09;37!UBERON:0000065;1.73e-08;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.22e-32,9;UBERON:0002133,3.76e-18,2;UBERON:0001557,2.88e-15,19;UBERON:0007100,1.12e-14,27;UBERON:0004151,1.44e-12,3;UBERON:0003978,2.03e-12,3;UBERON:0009751,2.03e-12,3;UBERON:0000946,2.03e-12,3;UBERON:0002523,2.03e-12,3;UBERON:0005983,2.03e-12,3;UBERON:0002165,2.03e-12,3;UBERON:0002062,2.03e-12,3;UBERON:0007280,2.03e-12,3;UBERON:0002084,3.74e-10,1;UBERON:0002082,3.74e-10,1;UBERON:0010226,3.74e-10,1;UBERON:0002134,5.79e-10,1;UBERON:0005208,5.79e-10,1;UBERON:0005946,5.79e-10,1;UBERON:0005965,5.79e-10,1;UBERON:0002078,5.79e-10,1;UBERON:0008947,5.93e-10,38;UBERON:0003258,5.93e-10,38;UBERON:0002135,6.31e-10,1;UBERON:0000072,6.69e-08,47;UBERON:0000065,8.91e-07,54 | |||
|phase1_expression=0.54503513781167,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0.732806975721629,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.269421344139376,0.490385709340376,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0.438977620880838,0,0,0.226864366320042,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,1.8929088006375,1.34867752062481,0.964044119533928,1.8749975364507,1.30727666455444,2.13543557199987,1.07865046528132,0.588664395376038,0.38474715694639,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352193736052904,0.414656231081544,0.432359860250884,0.12624243342638,0.063497894292169,0,0,0,0,0,0,0.224262168690721,0,0.07333828582095,0,0,0,0,0,0,0,0.532844358032199,0.428933980974443,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0.306923946576125,0,0,0,0,1.48418066444991,0,0,0,0.519254429183621,0.116210378459959,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.308097234229289,0,0,0,0.435050081742686,0,0.267096106940212,0,0,0,0,0,0,0,0.308033580176089,0,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0,0,0,0.318203247925937,0.78494864019923,0,0.54907405947211,0,0,1.58510321173008,0,0,0.487426979262569,1.05650146756755,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,1.39473591775749,0,0,0,0,0,0.0898683511473268,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0.291604613383254,0,0,0.241192877250816,0,0.331737779793674,0.591095237907095,0.438770794307945,0.32681539055697,0,0.230850775511391,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87025325156341,4.82389492768825,4.10577285266046,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,2.23425921017803,0.687481272035051,3.58936512288407,1.79711100449092,9.01374701086799,1.33902874465124,0.201550417460179,0,0,0,0,0,0.295282444544246,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0.786818822024972,0,1.6135860539956,0,0.714695326373367,11.9176554665778,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0.26446520348538,0.171086837884329,0,0.213574825135389,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0,0.221858103073705,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0.378806010550178,0,0,0,0,0.310874401165561,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.737318726261158,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.247871528518004,0,0.318004350653419,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0.177404740325278,0,0,0,0,0,0.111231401892069,0,0.157115589916002,0,0,0,0,0.643288897589907,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0.475680363110274,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0.0939839179798536,0.322289439867886,0,0,0,0,0.730336388246517,0.458729283404541,0,0,0,0,1.0580536810308,0,0.924351257262837,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.143444410785353,0.332660356546013,0,0,0,0,0,0.366724332548599,0.813792356631477,0,0.201273793591026,0 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| ||
|short_description=p@chr12:20521255..20521275,+ | |||
}} | }} |
Latest revision as of 07:25, 24 July 2015
Short description: | p@chr12:20521255..20521275, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:20521255..20521275, + |
Coexpression cluster: | C2200_left_heart_epitheloid_Hep2_cervical_small_large |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 1.15e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.22e-32 | 9 |
atrioventricular valve | 3.76e-18 | 2 |
upper respiratory tract | 2.88e-15 | 19 |
primary circulatory organ | 1.12e-14 | 27 |
cardiac chamber | 1.44e-12 | 3 |
valve | 2.03e-12 | 3 |
cardiac mesenchyme | 2.03e-12 | 3 |
cardial valve | 2.03e-12 | 3 |
tunica intima | 2.03e-12 | 3 |
heart layer | 2.03e-12 | 3 |
endocardium | 2.03e-12 | 3 |
endocardial cushion | 2.03e-12 | 3 |
presumptive endocardium | 2.03e-12 | 3 |
heart left ventricle | 3.74e-10 | 1 |
cardiac ventricle | 3.74e-10 | 1 |
future cardiac ventricle | 3.74e-10 | 1 |
tricuspid valve | 5.79e-10 | 1 |
right atrium valve | 5.79e-10 | 1 |
outflow tract of atrium | 5.79e-10 | 1 |
outflow part of right atrium | 5.79e-10 | 1 |
right cardiac atrium | 5.79e-10 | 1 |
respiratory primordium | 5.93e-10 | 38 |
endoderm of foregut | 5.93e-10 | 38 |
mitral valve | 6.31e-10 | 1 |
segment of respiratory tract | 6.69e-08 | 47 |
respiratory tract | 8.91e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.76e-18 | 2 |
vascular disease | 8.91e-10 | 1 |
ischemia | 8.91e-10 | 1 |
extrinsic cardiomyopathy | 8.91e-10 | 1 |
myocardial ischemia | 8.91e-10 | 1 |
myocardial infarction | 8.91e-10 | 1 |
cardiovascular system disease | 1.55e-09 | 4 |