FFCP PHASE1:Hg19::chr12:86230099..86230125,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:86230099..86230125,- to FFCP PHASE1:Hg19::chr12:86230099..86230125,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9182 | |EntrezGene=9182 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15739 | |HGNC=15739 | ||
|TSSclassifier=strong | |||
|UniProt=O75901 | |UniProt=O75901 | ||
|association_with_transcript=192bp_to_NM_005447,uc001taf.1_5end | |||
|cluster_id=chr12:86230099..86230125,- | |||
|description=CAGE_peak_4_at_RASSF9_5end | |||
|id=chr12:86230099..86230125,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;3.69e-08;3!CL:0000067;3.69e-08;3!CL:0005012;3.69e-08;3!CL:0002304;3.69e-08;3!CL:0002623;3.69e-08;3!CL:0000622;3.85e-08;5!CL:0000154;8.96e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.17e-08,3;CL:0000622,3.11e-08,5;CL:0000064,4.89e-08,3;CL:0000067,4.89e-08,3;CL:0005012,4.89e-08,3;CL:0002304,4.89e-08,3;CL:0000154,7.52e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.82e-09!659;UBERON:0000467!6.13e-09!625;UBERON:0000480!8.18e-09!626;UBERON:0007023!7.49e-08!115;UBERON:0000481!8.69e-08!347;UBERON:0000475!1.09e-07!365;UBERON:0000119!3.14e-07!312;UBERON:0000483!4.14e-07!309;UBERON:0004121!5.71e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;7.32e-11;6!UBERON:0001896;1.14e-08;3!UBERON:0005290;1.14e-08;3!UBERON:0001778;3.69e-08;3!UBERON:0001775;3.69e-08;3!UBERON:0007625;2.06e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,6.84e-11,6;UBERON:0007023,1.89e-09,114;UBERON:0001896,1.22e-08,3;UBERON:0005290,1.22e-08,3;UBERON:0010096,1.22e-08,3;UBERON:0001778,4.89e-08,3;UBERON:0001775,4.89e-08,3;UBERON:0007625,3.08e-07,11 | |||
|phase1_expression=1.09007027562334,1.07050261945492,0.704772020479856,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,0.61560529038394,0,0.313454721478088,0.572471974262113,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,0,0,0,0,2.26883561193763,1.33037638477538,1.31752178539689,0.523916301990851,0.364295288292542,0,0,0,0,0,0,0,0,0,0.347140501607594,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0,0,0,0.436094052142534,0.496971951695318,0.886413581652058,1.32409180813219,1.14734648299525,1.77334191099179,0.560677600142307,0,0,0.622422070799533,0.404132016209064,0.490385709340376,0.151357427644931,1.15235184896,0.234321431833797,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0.718618141816238,0,0,0,0,0,0.150238058906597,0,0.179389635688862,0,0.423863802319124,0.300091096084402,0.309157587715317,0.257640540045629,0,0.168776332241266,0.487185025805993,0.252433774244115,0.276149695926898,0.323292113637624,0,0,0.169560592310488,0.386521706326594,0.272746120590835,1.43402297694502,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0.473227200159376,0.168584690078102,0.482022059766964,0.330881918197182,0.653638332277218,0.237270619111097,0.269662616320329,0.196221465125346,0,0.738155454624648,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0.686271241194102,0.878002283269004,0,0.402115889646523,1.20364978706088,0,0,1.44331342025273,1.27523445472584,0.70445216541493,0,0,0.380508304469197,0,0,0,0,0,0,1.34385702559088,0.708875486211932,0.985143749731331,1.16253575405585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.1466765716419,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0.239624855491583,0,0,0.579125226670317,0.205476322550383,0.716243852959582,0,0,0,0,0.508189248444927,1.30139853857622,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0.535286966391485,1.10391690523754,0.702848489956279,0.601892199455438,0,0,1.32845119707087,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0.496215615637554,1.99500565274481,1.96462066103151,0.512556597022804,0.511707249066704,0.160853921143607,0,0.771048469013278,0.355123450626254,1.14978018419333,0.519254429183621,0.232420756919918,0.362578348774867,0.200506470303285,0.736647911487171,0.229628896329213,0.182091168006717,0,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0.650756789328606,0.824328093181778,0,0,0,1.30012049207304,0,0.676695028044854,0,0.15350367472613,0.137836572484531,1.50388342815583,0.580066775656914,0.170453254832202,0.890320356467374,1.15699440752685,2.30628080838127,3.06270509987002,0.809262246844399,0,0.31481234683064,0,0.308033580176089,0,0,0.9266210955196,0.858749320451947,0.372158369359667,0.316379424718726,0,0,0,0.318203247925937,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0.424216295861138,0,0.551365343546124,1.32687795048244,0.438450885253763,0,0,0,0,0,0,0,0,1.41904425628239,0.211107635297664,0.658589785919804,0,0,0.673554789078584,0,0,1.31801321087491,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0.606802608747567,0,0,0.95497793895076,0.296964680832639,0,0,0,0.222617410045812,0,0,1.39473591775749,0.276283915531148,0,0,0,0,0.179736702294654,0.179021174675609,0,1.38100767891707,0,0,0,0.371072392647405,0,0,0,0,0.341380344856499,0,0,0,0,0.173624994933292,0.885741385813839,0.964771509003264,0,0,0.591095237907095,0.438770794307945,1.19832309870889,2.50962739701486,1.46205491157214,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0.265372693510018,0.611030144933625,0,0,0,1.14581926067151,0,0,0,0,0,0,0,0,2.40109002588254,0,0,0,0,0,0,0.569219092059585,0,1.38847790668105,0.0979923974143777,0.261177619741208,0.34945333648406,0,1.54810130062536,4.67771629351588,1.88865551222381,1.64881328030313,0,0.451961481561065,0,0,0.0633107959558787,0.391102765469606,0.240476460754601,0.213452994739353,0.599428828746391,0,0.114536596165916,0,0.14405479798815,0,0.471388069233591,0.135904206073614,0.104602846312333,0,0.577901179803038,0,0,0,0.429765441419957,0,1.11712960508902,0.687481272035051,0,0.199679000498991,0,1.56220020209311,0.403100834920358,0.360299883542404,0,0,0,0,3.14967940847196,0,1.59045937961861,0.408610218334727,0,0,0,0,0,0,0,0.236417121897595,0.209818352539992,0,0,0.191915197319445,1.42939065274673,1.32418394073086,0,0,0,0.653174720218818,1.19730191562487,0,0,0,0.146552233678082,0,2.06852730178481,1.45455861916959,4.27717094710824,0,1.81538601365081,2.35806457649499,6.62782488555513,0,0,0,2.55336503108073,0.544017803369474,1.5041393641362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| ||
|short_description=p4@RASSF9 | |||
}} | }} |
Latest revision as of 04:18, 25 September 2015
Short description: | p4@RASSF9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RASSF9_5end |
Coexpression cluster: | NA |
Association with transcript: | 192bp_to_NM_005447, uc001taf.1_5end |
EntrezGene: | RASSF9 |
HGNC: | 15739 |
UniProt: | O75901 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.17e-08 | 3 |
acinar cell | 3.11e-08 | 5 |
ciliated cell | 4.89e-08 | 3 |
ciliated epithelial cell | 4.89e-08 | 3 |
multi-ciliated epithelial cell | 4.89e-08 | 3 |
non-pigmented ciliary epithelial cell | 4.89e-08 | 3 |
protein secreting cell | 7.52e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
brainstem | 6.84e-11 | 6 |
adult organism | 1.89e-09 | 114 |
medulla oblongata | 1.22e-08 | 3 |
myelencephalon | 1.22e-08 | 3 |
future myelencephalon | 1.22e-08 | 3 |
ciliary epithelium | 4.89e-08 | 3 |
ciliary body | 4.89e-08 | 3 |
pigment epithelium of eye | 3.08e-07 | 11 |