FFCP PHASE1:Hg19::chr15:40729742..40729753,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:40729742..40729753,+ | |||
|description=CAGE_peak_at_chr15:40729742..40729753,+ | |||
|id=chr15:40729742..40729753,+ | |||
|ontology_enrichment_celltype=CL:0002322!1.02e-31!5;CL:0000039!1.08e-14!7;CL:0000586!1.08e-14!7;CL:0000540!6.68e-10!6;CL:0000031!6.68e-10!6;CL:0000404!6.68e-10!6;CL:0000047!1.53e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;3.84e-14;5!CL:0000153;2.85e-08;9!CL:0000447;2.85e-08;9!CL:0000214;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.39e-14,5;CL:0000153,2.75e-08,9;CL:0000447,2.75e-08,9;CL:0000214,8.15e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.07e-07;10!UBERON:0007687;1.07e-07;10 | |||
|ontology_enrichment_disease=DOID:3095!1.68e-21!22;DOID:2994!1.68e-21!22;DOID:0050687!3.41e-09!143;DOID:3371!6.80e-08!1;DOID:4549!6.80e-08!1;DOID:5861!6.80e-08!1;DOID:6496!6.80e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:3371;8.72e-18;1!DOID:4549;8.72e-18;1!DOID:5861;8.72e-18;1!DOID:6496;8.72e-18;1!DOID:1115;4.30e-08;20 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,8.72e-18,1;DOID:4549,8.72e-18,1;DOID:5861,8.72e-18,1;DOID:6496,8.72e-18,1;DOID:1115,4.25e-08,20 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.31e-19!8;UBERON:0003135!4.84e-14!11;UBERON:0000991!4.15e-10!21;UBERON:0009196!4.15e-10!21;UBERON:0009117!4.15e-10!21;UBERON:0005564!4.15e-10!21;UBERON:0004176!1.26e-09!22;UBERON:0003101!6.52e-07!22;UBERON:0000079!6.52e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;8.62e-07;3!UBERON:0006915;8.62e-07;3!UBERON:0007616;8.62e-07;3!UBERON:0004755;8.62e-07;3!UBERON:0002217;8.62e-07;3!UBERON:0002018;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,8.15e-07,3;UBERON:0007616,8.15e-07,3;UBERON:0002217,8.15e-07,3;UBERON:0002018,8.15e-07,3;UBERON:0002418,8.62e-07,3;UBERON:0004755,8.62e-07,3 | |||
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|short_description=p@chr15:40729742..40729753,+ | |||
}} | }} |
Latest revision as of 01:29, 25 July 2015
Short description: | p@chr15:40729742..40729753, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:40729742..40729753, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.39e-14 | 5 |
GAG secreting cell | 2.75e-08 | 9 |
carbohydrate secreting cell | 2.75e-08 | 9 |
synovial cell | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 8.15e-07 | 3 |
layer of synovial tissue | 8.15e-07 | 3 |
synovial joint | 8.15e-07 | 3 |
synovial membrane of synovial joint | 8.15e-07 | 3 |
cartilage tissue | 8.62e-07 | 3 |
skeletal tissue | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 8.72e-18 | 1 |
extraosseous chondrosarcoma | 8.72e-18 | 1 |
myxoid chondrosarcoma | 8.72e-18 | 1 |
extraskeletal myxoid chondrosarcoma | 8.72e-18 | 1 |
sarcoma | 4.25e-08 | 20 |