FFCP PHASE1:Hg19::chr15:56536556..56536567,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:56536556..56536567,- to FFCP PHASE1:Hg19::chr15:56536556..56536567,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:56536556..56536567,- | |||
|description=CAGE_peak_at_chr15:56536556..56536567,- | |||
|id=chr15:56536556..56536567,- | |||
|ontology_enrichment_celltype=CL:0002321!8.74e-12!248;CL:0000220!1.78e-11!246;CL:0000066!3.12e-10!254;CL:0002319!6.79e-09!25;CL:0000548!7.18e-08!679;CL:0000004!7.18e-08!679;CL:0000255!7.18e-08!679;CL:0000012!1.54e-07!682;CL:0000221!6.26e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000182;6.58e-11;12!CL:0000222;2.24e-09;1!CL:0002601;2.24e-09;1!CL:0000150;1.39e-08;9!CL:0000622;2.43e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.83e-11,12;CL:0002601,1.43e-09,1;CL:0000150,2.56e-08,9;CL:0000223,6.96e-08,58;CL:0000622,3.91e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.95e-12;11!UBERON:0009497;4.41e-10;13!UBERON:0008425;2.24e-09;1 | |||
|ontology_enrichment_disease=DOID:14566!8.98e-09!239;DOID:162!9.35e-09!235;DOID:0050687!6.19e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3371;2.24e-09;1!DOID:4549;2.24e-09;1!DOID:5861;2.24e-09;1!DOID:6496;2.24e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.99e-09,1;DOID:4549,1.99e-09,1;DOID:5861,1.99e-09,1;DOID:6496,1.99e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002365;1.10e-11;31!UBERON:0002330;1.10e-11;31!UBERON:0007195;2.24e-09;1!UBERON:0002107;6.14e-07;19!UBERON:0006925;6.14e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,5.87e-12,31;UBERON:0002330,5.87e-12,31;UBERON:0002530,1.14e-09,59;UBERON:0007195,3.83e-09,1;UBERON:0002107,5.09e-07,19;UBERON:0006925,5.09e-07,19;UBERON:0008836,5.09e-07,19 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,2.53299878168311,0,0,0,0,0.436882744260345,0.527533956456907,0,0,0,0,0,0,0.492484232307152,0,0,0.286235987131057,0.821246550437305,0.502170558379211,0.152826811495903,1.06730766284929,0.550975469195755,0,0,0,0.919421224478927,1.50602959389125,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0.795285947051099,0,0.661743720148475,0.443458794925128,0.351339142772504,0.0654895377488563,0.364295288292542,0,0,0,0,0,0.571994910780128,0,0.198762407366705,0.860234595106124,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0.357198913136319,0.673588117878509,0.563057402416611,0,0,0.183201743930407,0,0,0.436094052142534,0,0.506522046658319,0.264818361626438,0,0,0,0,0,0.933633106199299,0.269421344139376,0.490385709340376,0.151357427644931,0,0,0,0,0.149448680551801,0,0.161872944368132,0.702254033511242,0.204154171254893,0.122834317311768,0,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.750711119231785,0.277064115484183,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0,0,0,0,0.168776332241266,0.194874010322397,0,0.0920498986422993,0,0.355009592516614,0,0,0,0.272746120590835,0.860413786167011,0.121973706129595,0.132529768321485,0.232387885739037,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,1.09750285408626,0,0.301586917234893,0.0925884451585296,0,0,1.44331342025273,0.231860809950154,0,0,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0.425325291727159,0.0895585227028483,0,0,0,0,0,0,0,0,0.763976851116555,0,0,0.102827492703324,0,0,0.336393253036082,0,0.07333828582095,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0.428933980974443,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.716243852959582,0,0,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0.356857977594324,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0.303127571446259,0,0.907170879989041,0,0.153461973288062,0,0.256278298511402,0.511707249066704,0,0,0,0.355123450626254,0.164254312027618,0,0.116210378459959,0,1.40354529212299,0.0920809889358963,0.114814448164607,0,0.262248829918848,0,0.15403067420883,0,0,0.211103257785751,0,0.340187410553031,0.215915916102139,0,0.270946437543853,0,0,0.831076008928724,0.223874754722178,0,0,1.02580050046556,0,0,0.103041011647722,0.183138929636687,0.247528499761764,1.14853107599234,0.650060246036521,0,0.193341436584244,0.308097234229289,0.460511024178389,0.137836572484531,0.214840489736547,0.435050081742686,0,0.178064071293475,0.165284915360978,0,1.78657797492418,0.10115778085555,0,0,0,0,0,0,0.37064843820784,0,0.372158369359667,0.316379424718726,0.190630193923825,0.767693373934002,0.42793898803392,0.318203247925937,0,0.899362287916574,0.274537029736055,0.824686816419805,0,0,0,0,0.243713489631284,0,0,0.424216295861138,0,0,0,0,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0,0,0,1.41904425628239,0,0,0.75894634753143,0.349934720244983,0.288666338176536,0.670302275535787,0,0,0.43050537267123,0,0,0.689170200620878,0,0,0,0,0,0,0,0,0.640944426764839,0.962479855263359,0.245040215981032,0.185803175125719,0,0.640276590135727,1.11598390910176,0,0,0.635020748171649,0.324621940274555,0.561594356226918,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.20453736500431,0,0,0.359473404589307,0,0,0,0,1.11136990144637,0,0,0,0,1.83665999992011,0,0.1137934482855,0,0,0.689486746482929,1.16641845353302,0.173624994933292,0,0,0,0,0.295547618953547,0,0,0,0,0.227884111694002,0,0,0,0,0.0915975934018623,0,0,0.470940769185074,0.498635045700469,0,0,0,0,0.476809736941136,0.843992258112108,0,0,0,0,0,0,0.296521128680622,0.617819694732514,0.522109747527277,0,0,0,0.182454789215666,0,0.242780379534093,0,0,0.30607276163049,0,0.150323419414493,0.207376382794494,0,0,0,0,0.569219092059585,0,0.347119476670262,0.0979923974143777,1.48000651186684,0,0.343972064943233,0,0,0,0,1.3238419003725,0,0,0.19871461170299,0,0.586654148204409,0.320635281006135,0,0,0.288180834308212,0.80175617316141,0.171594997861965,0,0.248505071130865,0,0.271808412147228,0.313808538937,0.203996435272644,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0.360299883542404,1.16495949527454,1.49688046383725,1.40106959247983,1.41547442093788,0.0984274815147488,0.0846733320657845,0,0,0.321506296930038,0.962776056180637,1.24632101408756,0,0,0.0607495566580247,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.339936274560377,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0.1251909307065,0,0.110929051536852,0,0.27669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| 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| ||
|short_description=p@chr15:56536556..56536567,- | |||
}} | }} |
Latest revision as of 02:43, 25 July 2015
Short description: | p@chr15:56536556..56536567, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:56536556..56536567, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.83e-11 | 12 |
uterine smooth muscle cell | 1.43e-09 | 1 |
glandular epithelial cell | 2.56e-08 | 9 |
endodermal cell | 6.96e-08 | 58 |
acinar cell | 3.91e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 5.87e-12 | 31 |
exocrine system | 5.87e-12 | 31 |
gland | 1.14e-09 | 59 |
stroma of bone marrow | 3.83e-09 | 1 |
liver | 5.09e-07 | 19 |
digestive gland | 5.09e-07 | 19 |
liver bud | 5.09e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.99e-09 | 1 |
extraosseous chondrosarcoma | 1.99e-09 | 1 |
myxoid chondrosarcoma | 1.99e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 1.99e-09 | 1 |