FFCP PHASE1:Hg19::chr17:39777878..39777913,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:39777878..39777913,+ | |||
|coexpression_cluster_id=C544 | |||
|description=CAGE_peak_at_chr17:39777878..39777913,+ | |||
|id=chr17:39777878..39777913,+ | |||
|ontology_enrichment_celltype=CL:0002076!6.25e-27!43;CL:0000066!1.62e-25!254;CL:0002368!7.88e-22!13;CL:0000223!2.52e-19!59;CL:0002202!3.01e-13!9;CL:0002632!3.01e-13!9;CL:0002159!1.70e-11!13;CL:0002251!1.74e-11!21;CL:0002328!9.68e-09!3;CL:0000068!1.99e-08!3;CL:0000069!1.99e-08!3;CL:0000307!1.99e-08!3;CL:0000377!1.99e-08!3;CL:0000240!5.45e-07!6;CL:0000311!5.45e-07!6;CL:0000079!5.45e-07!6;CL:0000237!5.45e-07!6;CL:0000036!5.45e-07!6;CL:0000357!5.45e-07!6;CL:0000114!5.45e-07!6;CL:0002150!9.01e-07!3;CL:0000861!9.01e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.32e-31;13!CL:0002076;3.54e-21;42!CL:0002159;2.43e-18;14!CL:0002202;6.67e-17;9!CL:0002632;6.67e-17;9!CL:0002328;5.67e-14;3!CL:0000307;1.89e-13;3!CL:0000240;1.76e-11;6!CL:0000311;1.76e-11;6!CL:0000079;1.76e-11;6!CL:0000237;1.76e-11;6!CL:0000244;1.45e-10;4!CL:0000731;1.45e-10;4!CL:0002327;2.17e-10;4!CL:0000575;5.32e-10;2!CL:0002077;3.50e-09;34!CL:0000312;2.46e-08;5!CL:0000362;6.74e-08;9!CL:0002251;5.42e-07;20!CL:0002577;6.06e-07;3!CL:0002231;6.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,3.02e-31,13;CL:0002076,1.14e-28,42;CL:0000066,9.21e-24,253;CL:0000223,1.46e-19,58;CL:0002159,2.38e-18,14;CL:0002202,6.32e-17,9;CL:0002632,6.32e-17,9;CL:0002328,5.32e-14,3;CL:0000068,1.85e-13,3;CL:0000069,1.85e-13,3;CL:0000307,1.85e-13,3;CL:0000377,1.85e-13,3;CL:0000240,1.88e-11,6;CL:0000311,1.88e-11,6;CL:0000079,1.88e-11,6;CL:0000237,1.88e-11,6;CL:0000036,1.88e-11,6;CL:0000357,1.88e-11,6;CL:0000114,1.88e-11,6;CL:0002077,1.13e-10,34;CL:0000244,1.30e-10,4;CL:0000731,1.30e-10,4;CL:0002327,2.31e-10,4;CL:0000575,5.09e-10,2;CL:0000312,2.62e-08,5;CL:0000362,6.87e-08,9;CL:0002251,5.77e-07,20;CL:0002231,5.98e-07,3;CL:0002577,6.91e-07,3;CL:0002321,9.03e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000377;1.89e-13;3!CL:0000223;7.29e-12;58!CL:0000357;1.76e-11;6!CL:0000114;1.76e-11;6 | |||
|ontology_enrichment_disease=DOID:1749!2.71e-09!14;DOID:305!4.11e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!8.05e-27!72;UBERON:0000065!2.96e-25!53;UBERON:0004119!9.62e-22!169;UBERON:0000925!9.62e-22!169;UBERON:0006595!9.62e-22!169;UBERON:0000072!9.52e-21!46;UBERON:0001557!5.46e-20!19;UBERON:0001737!1.87e-19!9;UBERON:0008947!7.67e-16!38;UBERON:0003258!7.67e-16!38;UBERON:0000077!1.43e-14!130;UBERON:0001041!2.81e-14!98;UBERON:0001007!5.22e-14!155;UBERON:0001555!5.22e-14!155;UBERON:0007026!5.22e-14!155;UBERON:0004921!1.82e-12!129;UBERON:0004185!1.82e-12!129;UBERON:0000064!4.51e-11!219;UBERON:0007196!3.46e-10!14;UBERON:0001558!3.46e-10!14;UBERON:0005631!1.40e-09!14;UBERON:0000158!1.40e-09!14;UBERON:0000166!5.07e-09!21;UBERON:0004815!9.68e-09!3;UBERON:0002031!9.68e-09!3;UBERON:0000063!1.49e-08!97;UBERON:0000365!2.36e-08!5;UBERON:0000161!2.46e-08!35;UBERON:0000165!1.10e-07!28;UBERON:0000930!1.10e-07!28;UBERON:0003729!1.60e-07!5;UBERON:0001723!2.23e-07!3;UBERON:0001033!2.23e-07!3;UBERON:0010056!2.23e-07!3;UBERON:0003102!2.28e-07!95;UBERON:0005910!6.07e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0000065;3.76e-17;44!UBERON:0004815;5.67e-14;3!UBERON:0002031;5.67e-14;3!UBERON:0000072;2.51e-12;37!UBERON:0001737;8.21e-11;9!UBERON:0001557;8.21e-11;9!UBERON:0001911;2.17e-10;4!UBERON:0007196;7.01e-10;15!UBERON:0001558;7.01e-10;15!UBERON:0001004;1.24e-08;65!UBERON:0002185;1.48e-08;5!UBERON:0000365;1.56e-08;5!UBERON:0005910;3.58e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000065,4.97e-16,54;UBERON:0001004,8.11e-16,74;UBERON:0004119,2.86e-15,160;UBERON:0000925,2.86e-15,160;UBERON:0006595,2.86e-15,160;UBERON:0004815,5.32e-14,3;UBERON:0002031,5.32e-14,3;UBERON:0008947,3.34e-13,38;UBERON:0003258,3.34e-13,38;UBERON:0001737,9.17e-11,9;UBERON:0001911,2.31e-10,4;UBERON:0005333,2.31e-10,4;UBERON:0008425,2.31e-10,4;UBERON:0005311,2.31e-10,4;UBERON:0000072,3.33e-10,47;UBERON:0007196,6.79e-10,15;UBERON:0001558,6.79e-10,15;UBERON:0005157,4.53e-09,47;UBERON:0000365,1.43e-08,5;UBERON:0002185,1.43e-08,5;UBERON:0005153,5.45e-08,37;UBERON:0001041,1.94e-07,87;UBERON:0005910,3.32e-07,6;UBERON:0005178,6.26e-07,34;UBERON:0002224,6.26e-07,34;UBERON:0001007,8.14e-07,145;UBERON:0001555,8.14e-07,145;UBERON:0007026,8.14e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,4.2168828628955,5.17655614233503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37154345951051,5.93255108455087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41359888642308,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44499962275583,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,0.674338760312407,0.723033089650446,1.8749975364507,1.30727666455444,1.66089433377768,1.34831308160164,1.17732879075208,0.38474715694639,0,0,0,0,0,0,0,0,0,0,9.21902397432455,2.24803506515239,2.21163739305588,1.48141512253647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6798212819886,1.41775097242386,6.35865511190223,3.19697332365358,2.30029607499127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9438682865279,0,3.0239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60911646545913,9.9447468050768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.55042172225565,0,0,0,0,0,0,0,0,0,2.14870389969272,2.88285101047659,3.70076866234294,3.13589120652205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50177493086331,3.35151137767894,3.26672954583968,0,0,5.05414427002877,7.53831261012349,2.75668080248351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0.296964680832639,2.15012491469462,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,1.95193241990045,0,0.227884111694002,0,0,0.108647371922008,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489961987071888,0.957651272384428,0,0,0.19351266257817,0.0730893170861856,0.328461828212837,0,0,0.451961481561065,0,0,0,0,0.0801588202515337,0,1.19885765749278,0,0,0,0,0,2.12124631155116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03152031398899,0,0,0,0,2.49489756515279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.53264997088611,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,1.10057159113007,0.462102664601353,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72989095493466,0.85359238546975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39252483350749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0.870866991587845,0.684466602170562,0.0673520530145875,0.143444410785353,0,0.244209805832924,0,0,0,0,0,0.406896178315738,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.67768489791571,4.2168828628955,5.17655614233503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.37154345951051,5.93255108455087,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41359888642308,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.44499962275583,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0.709840800239063,0.674338760312407,0.723033089650446,1.8749975364507,1.30727666455444,1.66089433377768,1.34831308160164,1.17732879075208,0.38474715694639,0,0,0,0,0,0,0,0,0,0,9.21902397432455,2.24803506515239,2.21163739305588,1.48141512253647,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6798212819886,1.41775097242386,6.35865511190223,3.19697332365358,2.30029607499127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9438682865279,0,3.0239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60911646545913,9.9447468050768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.55042172225565,0,0,0,0,0,0,0,0,0,2.14870389969272,2.88285101047659,3.70076866234294,3.13589120652205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50177493086331,3.35151137767894,3.26672954583968,0,0,5.05414427002877,7.53831261012349,2.75668080248351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0.296964680832639,2.15012491469462,0,0,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0.21787692703798,1.95193241990045,0,0.227884111694002,0,0,0.108647371922008,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489961987071888,0.957651272384428,0,0,0.19351266257817,0.0730893170861856,0.328461828212837,0,0,0.451961481561065,0,0,0,0,0.0801588202515337,0,1.19885765749278,0,0,0,0,0,2.12124631155116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03152031398899,0,0,0,0,2.49489756515279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.53264997088611,1.86623178009892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471878893390961,1.10057159113007,0.462102664601353,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72989095493466,0.85359238546975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39252483350749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0.870866991587845,0.684466602170562,0.0673520530145875,0.143444410785353,0,0.244209805832924,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p@chr17:39777878..39777913,+ | |||
}} | }} |
Latest revision as of 16:46, 25 July 2015
Short description: | p@chr17:39777878..39777913, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39777878..39777913, + |
Coexpression cluster: | C544_nasal_Keratinocyte_Esophageal_Urothelial_Placental_Corneal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory tract | 4.97e-16 | 54 |
respiratory system | 8.11e-16 | 74 |
endoderm-derived structure | 2.86e-15 | 160 |
endoderm | 2.86e-15 | 160 |
presumptive endoderm | 2.86e-15 | 160 |
lower respiratory tract epithelium | 5.32e-14 | 3 |
epithelium of bronchus | 5.32e-14 | 3 |
respiratory primordium | 3.34e-13 | 38 |
endoderm of foregut | 3.34e-13 | 38 |
larynx | 9.17e-11 | 9 |
mammary gland | 2.31e-10 | 4 |
mammary bud | 2.31e-10 | 4 |
mammary ridge | 2.31e-10 | 4 |
mammary placode | 2.31e-10 | 4 |
segment of respiratory tract | 3.33e-10 | 47 |
tracheobronchial tree | 6.79e-10 | 15 |
lower respiratory tract | 6.79e-10 | 15 |
epithelial fold | 4.53e-09 | 47 |
urothelium | 1.43e-08 | 5 |
bronchus | 1.43e-08 | 5 |
epithelial bud | 5.45e-08 | 37 |
foregut | 1.94e-07 | 87 |
transitional epithelium | 3.32e-07 | 6 |
thoracic cavity element | 6.26e-07 | 34 |
thoracic cavity | 6.26e-07 | 34 |
digestive system | 8.14e-07 | 145 |
digestive tract | 8.14e-07 | 145 |
primitive gut | 8.14e-07 | 145 |