FFCP PHASE1:Hg19::chr19:51522099..51522111,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:51522099..51522111,- to FFCP PHASE1:Hg19::chr19:51522099..51522111,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5655 | |EntrezGene=5655 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6358 | |HGNC=6358 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK309456_5end | |||
|cluster_id=chr19:51522099..51522111,- | |||
|description=CAGE_peak_5_at_KLK10_5end | |||
|id=chr19:51522099..51522111,- | |||
|ontology_enrichment_celltype=CL:0000076!4.23e-09!62;CL:0002076!1.81e-08!43;CL:0000066!6.25e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002097;8.69e-10;2!CL:0000317;1.51e-09;2!CL:1000448;1.51e-09;2!CL:0002308;1.51e-09;2!CL:0002140;1.51e-09;2!CL:0000150;2.33e-08;9!CL:0000174;6.14e-07;3!CL:0000746;6.69e-07;3!CL:0000322;8.86e-07;3!CL:0002231;8.86e-07;3!CL:0002178;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,8.69e-10,2;CL:0000317,1.44e-09,2;CL:1000448,1.44e-09,2;CL:0002308,1.44e-09,2;CL:0002140,1.44e-09,2;CL:0000150,2.29e-08,9;CL:0000174,6.14e-07,3;CL:0000746,6.88e-07,3;CL:0000513,6.88e-07,3;CL:0002178,8.15e-07,3;CL:0002231,9.12e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009143;9.48e-18;1!CL:0000513;6.69e-07;3 | |||
|ontology_enrichment_disease=DOID:1749!3.48e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:3151;9.48e-18;1!DOID:3149;9.48e-18;1!DOID:1749;2.86e-11;14!DOID:4929;7.98e-10;2!DOID:3451;1.51e-09;2!DOID:4159;1.51e-09;2!DOID:0060122;1.51e-09;2!DOID:3910;1.51e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,1.70e-17,1;DOID:3149,1.70e-17,1;DOID:1749,2.28e-11,14;DOID:4929,7.98e-10,2;DOID:3910,1.86e-09,2;DOID:3451,2.02e-09,2;DOID:4159,2.02e-09,2;DOID:0060122,2.02e-09,2;DOID:305,2.69e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.57e-09!115;UBERON:0002294!6.34e-09!7;UBERON:0001173!6.34e-09!7;UBERON:0004912!6.34e-09!7;UBERON:0003729!1.54e-08!5;UBERON:0002110!7.25e-08!3;UBERON:0006242!7.25e-08!3;UBERON:0000344!2.87e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.66e-18;1!UBERON:0003703;2.66e-18;1!UBERON:0001174;2.66e-18;1!UBERON:0004914;2.66e-18;1!UBERON:0000997;9.48e-18;1!UBERON:0005056;9.48e-18;1!UBERON:0004176;9.48e-18;1!UBERON:0002419;1.51e-09;2!UBERON:0004903;1.51e-09;2!UBERON:0007771;1.51e-09;2!UBERON:0003297;1.51e-09;2!UBERON:0001821;1.51e-09;2!UBERON:0003487;1.51e-09;2!UBERON:0001820;1.51e-09;2!UBERON:0002173;1.51e-09;2!UBERON:0002186;1.51e-09;2!UBERON:0000058;1.27e-07;10!UBERON:0002114;5.80e-07;2!UBERON:0002369;6.14e-07;3!UBERON:0001235;6.14e-07;3!UBERON:0006858;6.14e-07;3!UBERON:0001043;8.86e-07;3!UBERON:0004821;8.86e-07;3!UBERON:0007499;8.86e-07;3!UBERON:0003215;8.86e-07;3!UBERON:0010368;8.86e-07;3!UBERON:0009911;8.86e-07;3!UBERON:0002299;8.86e-07;3!UBERON:0006524;8.86e-07;3!UBERON:0008874;8.86e-07;3!UBERON:0002169;8.86e-07;3!UBERON:0004894;8.86e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.66e-18,1;UBERON:0003703,2.66e-18,1;UBERON:0001174,2.66e-18,1;UBERON:0004914,2.66e-18,1;UBERON:0000997,5.26e-18,1;UBERON:0005056,5.26e-18,1;UBERON:0002419,1.44e-09,2;UBERON:0007771,1.44e-09,2;UBERON:0003297,1.44e-09,2;UBERON:0001821,1.44e-09,2;UBERON:0003487,1.44e-09,2;UBERON:0001820,1.44e-09,2;UBERON:0005089,1.44e-09,2;UBERON:0005088,1.44e-09,2;UBERON:0004903,1.86e-09,2;UBERON:0002173,1.86e-09,2;UBERON:0002186,1.86e-09,2;UBERON:0002114,5.80e-07,2;UBERON:0002369,6.14e-07,3;UBERON:0001235,6.14e-07,3;UBERON:0006858,6.14e-07,3;UBERON:0001043,9.64e-07,3;UBERON:0009143,9.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0,0,0,0.261958150995425,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.99972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,1.19705285616665,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.358042349351218,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0.568967241427498,1.01701460117107,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0.139423744278603,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7638631534588,0,0,0,0,0,0,1.16386819786103,0,0,0,0,0,0.195551382734803,0.400794101257669,0.213452994739353,1.59847687665704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.443716206147409,0.0620964029413835,0,0,0,0,0.470531639396343,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85994864474866,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.699397538597222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.490738592505128,0,2.93485757634686,0.577628330751691,0,0,0,0.526472298444801,0,0,0,0,4.73139475894545,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0.271878931907327,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9164274741762,0,0,0.335566295393377,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.71421575442263,0,0.320965466756673,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.227336094654718,0.535928260312357,0,0,0.426467963801962,0,0,0.186224142887574,0,0,0,0.870866991587845,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0.733448665097199,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0.12786256184353,0,0,0,0,0,0,0,0,0.261958150995425,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0.99972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,1.19705285616665,0,0,0,0.451199612907412,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,1.30012049207304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0.358042349351218,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0.568967241427498,1.01701460117107,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0.139423744278603,0.461701551022782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7638631534588,0,0,0,0,0,0,1.16386819786103,0,0,0,0,0,0.195551382734803,0.400794101257669,0.213452994739353,1.59847687665704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0063040627978,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.443716206147409,0.0620964029413835,0,0,0,0,0.470531639396343,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85994864474866,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.699397538597222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.490738592505128,0,2.93485757634686,0.577628330751691,0,0,0,0.526472298444801,0,0,0,0,4.73139475894545,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0.271878931907327,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9164274741762,0,0,0.335566295393377,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.71421575442263,0,0.320965466756673,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.227336094654718,0.535928260312357,0,0,0.426467963801962,0,0,0.186224142887574,0,0,0,0.870866991587845,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0.733448665097199,0.813792356631477,0,0,0 | ||
|short_description=p5@KLK10 | |||
}} | }} |
Latest revision as of 13:51, 19 September 2015
Short description: | p5@KLK10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_KLK10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_AK309456_5end |
EntrezGene: | KLK10 |
HGNC: | 6358 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 8.69e-10 | 2 |
sebum secreting cell | 1.44e-09 | 2 |
epithelial cell of sweat gland | 1.44e-09 | 2 |
epithelial cell of skin gland | 1.44e-09 | 2 |
acinar cell of sebaceous gland | 1.44e-09 | 2 |
glandular epithelial cell | 2.29e-08 | 9 |
steroid hormone secreting cell | 6.14e-07 | 3 |
cardiac muscle cell | 6.88e-07 | 3 |
cardiac muscle myoblast | 6.88e-07 | 3 |
epithelial cell of stomach | 8.15e-07 | 3 |
epithelial cell of prostate | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.66e-18 | 1 |
extrahepatic bile duct | 2.66e-18 | 1 |
common bile duct | 2.66e-18 | 1 |
duodenal papilla | 2.66e-18 | 1 |
mammalian vulva | 5.26e-18 | 1 |
external female genitalia | 5.26e-18 | 1 |
skin gland | 1.44e-09 | 2 |
epidermis gland | 1.44e-09 | 2 |
gland of integumental system | 1.44e-09 | 2 |
sebaceous gland | 1.44e-09 | 2 |
skin sebaceous gland | 1.44e-09 | 2 |
sweat gland | 1.44e-09 | 2 |
sweat gland placode | 1.44e-09 | 2 |
sebaceous gland placode | 1.44e-09 | 2 |
bronchoalveolar duct junction | 1.86e-09 | 2 |
alveolar duct | 1.86e-09 | 2 |
bronchiole | 1.86e-09 | 2 |
duodenum | 5.80e-07 | 2 |
adrenal gland | 6.14e-07 | 3 |
adrenal cortex | 6.14e-07 | 3 |
adrenal/interrenal gland | 6.14e-07 | 3 |
esophagus | 9.64e-07 | 3 |
esophageal region | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.70e-17 | 1 |
keratoacanthoma | 1.70e-17 | 1 |
squamous cell carcinoma | 2.28e-11 | 14 |
tubular adenocarcinoma | 7.98e-10 | 2 |
lung adenocarcinoma | 1.86e-09 | 2 |
skin carcinoma | 2.02e-09 | 2 |
skin cancer | 2.02e-09 | 2 |
integumentary system cancer | 2.02e-09 | 2 |
carcinoma | 2.69e-07 | 106 |