FFCP PHASE1:Hg19::chr1:182642017..182642048,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85397 | |EntrezGene=85397 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16810 | |HGNC=16810 | ||
|TSSclassifier=strong | |||
|UniProt=P57771 | |UniProt=P57771 | ||
|association_with_transcript=0bp_to_ENST00000258302,ENST00000367557_5end | |||
|cluster_id=chr1:182642017..182642048,- | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_4_at_RGS8_5end | |||
|id=chr1:182642017..182642048,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.03e-17;24!CL:0000542;1.54e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.03e-17,24;CL:0000826,1.03e-17,24;CL:0000838,6.99e-09,52;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000051;1.54e-08;53 | |||
|ontology_enrichment_disease=DOID:3151!8.49e-07!1;DOID:3149!8.49e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.00e-40;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.00e-40,10;DOID:2531,4.95e-09,51;DOID:0060083,4.95e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.02e-39!57;UBERON:0005068!1.02e-39!57;UBERON:0006241!1.02e-39!57;UBERON:0007135!1.02e-39!57;UBERON:0002616!1.50e-34!59;UBERON:0001017!1.48e-28!82;UBERON:0000955!1.79e-28!69;UBERON:0006238!1.79e-28!69;UBERON:0005743!5.01e-27!86;UBERON:0002346!6.04e-26!90;UBERON:0003075!7.52e-25!86;UBERON:0007284!7.52e-25!86;UBERON:0000073!4.77e-24!94;UBERON:0001016!4.77e-24!94;UBERON:0003076!6.28e-22!15;UBERON:0003057!6.28e-22!15;UBERON:0002780!8.37e-22!41;UBERON:0001890!8.37e-22!41;UBERON:0006240!8.37e-22!41;UBERON:0004733!3.09e-21!12;UBERON:0002028!3.09e-21!12;UBERON:0007277!3.09e-21!12;UBERON:0003080!3.16e-21!42;UBERON:0002308!5.41e-21!9;UBERON:0000125!5.41e-21!9;UBERON:0004732!1.55e-19!13;UBERON:0007023!1.60e-17!115;UBERON:0000988!9.44e-17!3;UBERON:0002298!1.10e-16!8;UBERON:0002020!3.38e-16!34;UBERON:0003528!3.38e-16!34;UBERON:0001893!4.15e-16!34;UBERON:0000033!9.89e-16!123;UBERON:0002680!6.76e-15!9;UBERON:0001895!6.76e-15!9;UBERON:0010092!6.76e-15!9;UBERON:0000924!7.89e-15!173;UBERON:0006601!7.89e-15!173;UBERON:0000153!8.63e-15!129;UBERON:0007811!8.63e-15!129;UBERON:0001869!3.72e-14!32;UBERON:0004121!6.44e-14!169;UBERON:0003056!8.12e-14!61;UBERON:0002791!8.94e-14!33;UBERON:0000369!6.63e-13!4;UBERON:0002435!6.63e-13!4;UBERON:0000204!6.63e-13!4;UBERON:0010082!6.63e-13!4;UBERON:0009663!1.43e-12!7;UBERON:0001897!8.98e-12!2;UBERON:0002148!1.24e-11!2;UBERON:0009662!1.24e-11!2;UBERON:0001872!2.70e-10!5;UBERON:0002420!8.43e-10!9;UBERON:0007245!8.43e-10!9;UBERON:0010009!8.43e-10!9;UBERON:0010011!8.43e-10!9;UBERON:0000454!8.43e-10!9;UBERON:0000025!2.00e-09!194;UBERON:0005383!2.76e-08!3;UBERON:0005382!2.76e-08!3;UBERON:0001896!3.68e-08!3;UBERON:0005290!3.68e-08!3;UBERON:0010096!3.68e-08!3;UBERON:0006331!4.89e-08!3;UBERON:0001894!1.33e-07!7;UBERON:0006222!1.33e-07!7;UBERON:0004111!1.87e-07!241;UBERON:0001874!5.43e-07!1;UBERON:0001154!6.08e-07!1;UBERON:0001153!6.08e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p4@RGS8 | |||
}} | }} |
Latest revision as of 01:29, 19 September 2015
Short description: | p4@RGS8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RGS8_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | 0bp_to_ENST00000258302, ENST00000367557_5end |
EntrezGene: | RGS8 |
HGNC: | 16810 |
UniProt: | P57771 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.03e-17 | 24 |
pro-B cell | 1.03e-17 | 24 |
lymphoid lineage restricted progenitor cell | 6.99e-09 | 52 |
lymphocyte | 9.74e-09 | 53 |
common lymphoid progenitor | 9.74e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.00e-40 | 10 |
hematologic cancer | 4.95e-09 | 51 |
immune system cancer | 4.95e-09 | 51 |