FFCP PHASE1:Hg19::chr1:218614542..218614564,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:218614542..218614564,+ to FFCP PHASE1:Hg19::chr1:218614542..218614564,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:218614542..218614564,+ | |||
|coexpression_cluster_id=C3939 | |||
|description=CAGE_peak_at_chr1:218614542..218614564,+ | |||
|id=chr1:218614542..218614564,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.15e-10;3!CL:0000067;1.15e-10;3!CL:0005012;1.15e-10;3!CL:0002304;1.15e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.00e-10,3;CL:0000067,1.00e-10,3;CL:0005012,1.00e-10,3;CL:0002304,1.00e-10,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!2.88e-16!312;UBERON:0000483!7.57e-16!309;UBERON:0000477!6.09e-12!286;UBERON:0000025!8.39e-11!194;UBERON:0000481!8.78e-11!347;UBERON:0004111!2.14e-10!241;UBERON:0000955!1.62e-09!69;UBERON:0006238!1.62e-09!69;UBERON:0005743!4.17e-09!86;UBERON:0000033!4.86e-09!123;UBERON:0002616!1.14e-08!59;UBERON:0000475!1.19e-08!365;UBERON:0001017!1.34e-08!82;UBERON:0003075!3.27e-08!86;UBERON:0007284!3.27e-08!86;UBERON:0000153!3.38e-08!129;UBERON:0007811!3.38e-08!129;UBERON:0002791!3.90e-08!33;UBERON:0000073!5.16e-08!94;UBERON:0001016!5.16e-08!94;UBERON:0002020!7.72e-08!34;UBERON:0003528!7.72e-08!34;UBERON:0000956!9.23e-08!25;UBERON:0000203!9.23e-08!25;UBERON:0001893!1.12e-07!34;UBERON:0002346!1.12e-07!90;UBERON:0003056!1.70e-07!61;UBERON:0001869!2.23e-07!32;UBERON:0000060!3.13e-07!12;UBERON:0001049!6.71e-07!57;UBERON:0005068!6.71e-07!57;UBERON:0006241!6.71e-07!57;UBERON:0007135!6.71e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;2.32e-13;4!UBERON:0001778;1.15e-10;3!UBERON:0001775;1.15e-10;3!UBERON:0007625;2.01e-10;11!UBERON:0006876;6.45e-10;11!UBERON:0002203;6.48e-09;6!UBERON:0001768;6.48e-09;6!UBERON:0002200;6.48e-09;6!UBERON:0001801;4.98e-08;14!UBERON:0010371;9.21e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,3.28e-13,4;UBERON:0001778,1.00e-10,3;UBERON:0001775,1.00e-10,3;UBERON:0007625,2.38e-10,11;UBERON:0006876,1.04e-09,11;UBERON:0002203,8.11e-09,6;UBERON:0001768,8.11e-09,6;UBERON:0002200,8.11e-09,6;UBERON:0001801,5.66e-08,14 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0.872338524100369,0,0,0,0.491467873003018,0,0.436882744260345,0,0,0.662794751455832,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.136874425072884,1.00434111675842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,1.00267582127178,0.289693037921647,0.795285947051099,0,1.32348744029695,3.32594096193846,2.98638271356629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0.760272105718513,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.397227542439656,1.14734648299525,1.06400514659507,1.12135520028461,1.06748995729705,3.7000132262574,0,0.134710672069688,0.326923806226917,0.454072282934794,1.15235184896,0,0,0,0.149448680551801,0,0,0,0,0,0.516628905878827,0,1.7308685049499,0,0,0,0,0,0,0,0.45071417671979,0.680593098960126,0,0,0,0,0,0.257640540045629,0,0,0,0.252433774244115,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,1.28648187638577,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,1.02940686179115,0.329250856225877,0,0.301586917234893,0,0,0,7.21656710126366,0.579652024875384,2.58299127318808,0.144366447761074,0,1.33177906564219,0,1.71697232418975,0,0,0,0,1.00789276919316,0.283550194484773,0.716468181622786,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0.336393253036082,0,0.4400297149257,0.258543431515556,0,0,0,0,0.257207374262142,0,0,0.428933980974443,0,0,0,0.710783897485092,0,0.301439377059586,0,0.799783929456456,0,0,0,1.91699884393266,0,0,0.289562613335158,0,0,0,0,0,0,1.27047312111232,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,1.45579603071565,3.21172179834891,2.05013139544115,0.234282829985426,0,0,0,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.804269605718038,0,0,0,0.0821271560138091,0,0.116210378459959,0,1.60405176242628,0.644566922551274,0,0,0.655622074797121,0,0.0770153371044148,0,2.92278449306521,0.633309773357254,0,0,2.15915916102139,0,0.270946437543853,0.501689773854853,0.254876273045038,0.831076008928724,0.223874754722178,0,0,0,0.656029291399411,0.325378394664303,0,0.366277859273374,0,0,1.30012049207304,1.6068392984416,0,0.308097234229289,0,0,0,0,0,0.356128142586949,0.330569830721956,0,0.127612712494584,0,0,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0.18532421910392,0.286249773483982,1.116475108079,0.632758849437452,0.571890581771475,0,0.855877976067841,0,0.78494864019923,0.179872457583315,0.54907405947211,0.235624804691373,0,1.58510321173008,0,0,0.974853958525138,0,0.136499911407986,0.282810863907425,2.26016233240486,0,1.32687795048244,0.438450885253763,0,0,0.405820753925408,0,0,0.430234056612155,0.589494246078727,0.7133421029625,0,0.633322905892992,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98895302764489,0,0,0,0,0.422008249231538,0.222617410045812,0,4.22250816255987,0.19924798825107,0,0,0.102268682502155,0,1.86623752597084,0.179736702294654,0.179021174675609,0,0.0986434056369336,0,0,0,0.649376687132959,0,0,0,0,0.227586896570999,0.508507300585533,0,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0.295547618953547,0,0,0,0.153900517007594,1.02547850262301,0,0,0,0,0.183195186803725,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0.432777279484182,0,0.0884575645033392,0,0,0,0,0.067401132980677,0.802577647298789,0.234264445725339,0,0,0,0.394584402849391,0,1.22429104652196,0.189559738885464,0,0,0,0.992975867626496,0,0,0,0,0,0.0979923974143777,0.34823682632161,0.17472666824203,0.687944129886466,0,0,0,0,0,0.677942222341597,0.137041924646751,0,0.126621591911757,0,2.00397050628834,0,1.39866726707491,0,0.458146384663663,0.514784993585894,0,0,0,1.49494626680975,0.941425616810999,1.12198039399954,0,0.600420288709789,0.273810757783986,0,0.429765441419957,0,0,0.458320848023367,0,0,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0.393709926058995,0,0.795229689809303,0.817220436669454,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0.896436696664224,0.191915197319445,0,0,0,0.542999601753713,0,0.653174720218818,0,0,1.36310417428337,0.339936274560377,0,0,0.258565912723101,0,0.171086837884329,0,0,0.157204305099666,0.414239055347196,0,0,0,1.27668251554036,0,0,0,0,0.157054096250234,1.77213635993397,1.46431517882356,0.876336514945499,0.573409195690071,0.221858103073705,0.0620964029413835,0,0.874862855734746,0,0,0.705797459094515,0,0,0,0,0,0,0.251567901752575,0,0.915360273587694,0,0,0.147855149989634,0.796483835818512,0,0.310525913752519,1.65882483136342,0.265841714557995,2.60872530905867,0.450772826991655,0.761610424337591,0.406870733204662,0.545545977607678,0.537052785212442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| ||
|short_description=p@chr1:218614542..218614564,+ | |||
}} | }} |
Latest revision as of 03:58, 28 July 2015
Short description: | p@chr1:218614542..218614564, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:218614542..218614564, + |
Coexpression cluster: | C3939_Lens_Ciliary_anaplastic_mesothelioma_osteoclastoma_pharyngeal_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.00e-10 | 3 |
ciliated epithelial cell | 1.00e-10 | 3 |
multi-ciliated epithelial cell | 1.00e-10 | 3 |
non-pigmented ciliary epithelial cell | 1.00e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 3.28e-13 | 4 |
ciliary epithelium | 1.00e-10 | 3 |
ciliary body | 1.00e-10 | 3 |
pigment epithelium of eye | 2.38e-10 | 11 |
vasculature of organ | 1.04e-09 | 11 |
vasculature of eye | 8.11e-09 | 6 |
uvea | 8.11e-09 | 6 |
vasculature of head | 8.11e-09 | 6 |
anterior segment of eyeball | 5.66e-08 | 14 |