FFCP PHASE1:Hg19::chr1:64013603..64013614,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84455 | |EntrezGene=84455 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29379 | |HGNC=29379 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-65bp_to_ENST00000460678_5end | |||
|cluster_id=chr1:64013603..64013614,+ | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_6_at_EFCAB7_5end | |||
|id=chr1:64013603..64013614,+ | |||
|ontology_enrichment_celltype=CL:0002582!5.97e-12!3;CL:0000569!8.43e-10!4;CL:0000011!8.43e-10!4;CL:1000306!1.35e-09!4;CL:0002547!1.35e-09!4;CL:0002334!1.05e-07!12;CL:0002540!8.05e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002540;1.85e-17;6!CL:0002092;6.94e-11;10!CL:0000569;1.54e-07;4!CL:1000306;1.86e-07;4!CL:0002547;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,2.01e-17,6;CL:0002092,7.30e-11,10;CL:0000569,1.59e-07,4;CL:0000011,1.59e-07,4;CL:1000306,1.92e-07,4;CL:0002547,1.92e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000011;1.54e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000415!1.35e-09!4;UBERON:0007240!1.35e-09!4;UBERON:0005742!1.35e-09!4;UBERON:0005734!1.35e-09!4;UBERON:0004664!1.35e-09!4;UBERON:0004663!1.35e-09!4;UBERON:0000161!4.89e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;2.78e-26;1!UBERON:0000026;2.78e-26;1!UBERON:0008784;2.78e-26;1!UBERON:0006058;2.78e-26;1!UBERON:0003663;2.78e-26;1!UBERON:0004256;2.78e-26;1!UBERON:0004708;2.78e-26;1!UBERON:0002101;2.78e-26;1!UBERON:0004709;2.78e-26;1!UBERON:0002529;2.78e-26;1!UBERON:0010538;2.78e-26;1!UBERON:0003661;2.78e-26;1!UBERON:0010890;2.78e-26;1!UBERON:0002471;2.78e-26;1!UBERON:0001383;2.78e-26;1!UBERON:0010758;2.78e-26;1!UBERON:0010707;2.78e-26;1!UBERON:0000978;2.78e-26;1!UBERON:0002103;2.78e-26;1!UBERON:0001665;2.78e-26;1!UBERON:0003823;2.78e-26;1!UBERON:0000154;2.78e-26;1!UBERON:0010709;2.78e-26;1!UBERON:0005090;7.30e-14;2!UBERON:0001630;7.30e-14;2!UBERON:0002371;3.14e-09;12!UBERON:0004797;1.86e-07;4!UBERON:0000415;1.86e-07;4!UBERON:0007240;1.86e-07;4!UBERON:0005742;1.86e-07;4!UBERON:0005734;1.86e-07;4!UBERON:0004664;1.86e-07;4!UBERON:0004663;1.86e-07;4!UBERON:0001134;3.04e-07;16!UBERON:0002036;3.04e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,2.78e-26,1;UBERON:0001389,2.78e-26,1;UBERON:0000026,2.78e-26,1;UBERON:0008784,2.78e-26,1;UBERON:0006058,2.78e-26,1;UBERON:0003663,2.78e-26,1;UBERON:0004256,2.78e-26,1;UBERON:0004708,2.78e-26,1;UBERON:0002101,2.78e-26,1;UBERON:0004709,2.78e-26,1;UBERON:0002529,2.78e-26,1;UBERON:0010538,2.78e-26,1;UBERON:0003661,2.78e-26,1;UBERON:0010890,2.78e-26,1;UBERON:0002471,2.78e-26,1;UBERON:0001383,2.78e-26,1;UBERON:0004357,2.78e-26,1;UBERON:0004347,2.78e-26,1;UBERON:0005420,2.78e-26,1;UBERON:0005732,2.78e-26,1;UBERON:0010758,2.78e-26,1;UBERON:0010707,2.78e-26,1;UBERON:0000978,2.78e-26,1;UBERON:0002103,2.78e-26,1;UBERON:0001665,2.78e-26,1;UBERON:0003823,2.78e-26,1;UBERON:0000154,2.78e-26,1;UBERON:0010709,2.78e-26,1;UBERON:0005733,2.78e-26,1;UBERON:0005730,2.78e-26,1;UBERON:0005090,7.30e-14,2;UBERON:0001630,7.30e-14,2;UBERON:0000415,1.92e-07,4;UBERON:0007240,1.92e-07,4;UBERON:0005742,1.92e-07,4;UBERON:0005734,1.92e-07,4;UBERON:0004664,1.92e-07,4;UBERON:0004663,1.92e-07,4 | |||
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| ||
|short_description=p6@EFCAB7 | |||
}} | }} |
Latest revision as of 20:54, 18 September 2015
Short description: | p6@EFCAB7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EFCAB7_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | -65bp_to_ENST00000460678_5end |
EntrezGene: | EFCAB7 |
HGNC: | 29379 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 2.01e-17 | 6 |
bone marrow cell | 7.30e-11 | 10 |
cardiac mesenchymal cell | 1.59e-07 | 4 |
migratory trunk neural crest cell | 1.59e-07 | 4 |
fibroblast of tunica adventitia of artery | 1.92e-07 | 4 |
fibroblast of the aortic adventitia | 1.92e-07 | 4 |