FFCP PHASE1:Hg19::chr21:39704505..39704513,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr21:39704505..39704513,- | |||
|coexpression_cluster_id=C2632 | |||
|description=CAGE_peak_at_chr21:39704505..39704513,- | |||
|id=chr21:39704505..39704513,- | |||
|ontology_enrichment_celltype=CL:0000515!2.30e-17!4;CL:0002540!3.00e-12!6;CL:0000214!3.81e-11!3;CL:0002242!4.19e-09!1;CL:0000228!4.19e-09!1;CL:0002372!4.19e-09!1;CL:0000946!1.53e-08!1;CL:0000786!1.53e-08!1;CL:0000980!1.53e-08!1;CL:0000153!3.57e-08!9;CL:0000447!3.57e-08!9;CL:0000188!4.13e-08!9;CL:0002092!1.56e-07!10;CL:0000499!6.82e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000228;7.06e-34;1!CL:0002372;7.06e-34;1!CL:0002540;4.86e-23;6!CL:0002092;2.84e-14;10!CL:0000214;1.85e-12;3!CL:0000135;2.89e-12;3!CL:0000388;2.89e-12;3!CL:0000056;1.57e-09;4!CL:0000737;1.57e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,7.06e-34,1;CL:0002372,7.06e-34,1;CL:0002540,4.86e-23,6;CL:0002092,2.84e-14,10;CL:0000214,1.85e-12,3;CL:0000135,2.59e-12,3;CL:0000388,2.59e-12,3;CL:0000737,1.57e-09,4;CL:0000515,1.57e-09,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.57e-09;4!UBERON:0007123;7.01e-08;5 | |||
|ontology_enrichment_disease=DOID:5662!1.13e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006915!3.81e-11!3;UBERON:0002018!3.81e-11!3;UBERON:0002217!3.81e-11!3;UBERON:0007616!3.81e-11!3;UBERON:0004905!5.09e-07!5;UBERON:0000982!5.09e-07!5;UBERON:0004770!5.09e-07!5;UBERON:0002046!7.93e-07!5;UBERON:0004117!7.93e-07!5;UBERON:0007689!7.93e-07!5;UBERON:0007123!7.93e-07!5;UBERON:0003091!7.93e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.85e-12;3!UBERON:0007616;1.85e-12;3!UBERON:0002217;1.85e-12;3!UBERON:0002018;1.85e-12;3!UBERON:0007846;2.89e-12;3!UBERON:0000043;2.89e-12;3!UBERON:0007845;2.89e-12;3!UBERON:0002371;4.54e-12;12!UBERON:0001434;1.36e-08;36!UBERON:0001474;2.25e-08;18!UBERON:0002046;7.01e-08;5!UBERON:0002204;8.28e-08;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,1.85e-12,3;UBERON:0007616,1.85e-12,3;UBERON:0002217,1.85e-12,3;UBERON:0002018,1.85e-12,3;UBERON:0007846,2.59e-12,3;UBERON:0000043,2.59e-12,3;UBERON:0007845,2.59e-12,3;UBERON:0002046,7.49e-08,5;UBERON:0004117,7.49e-08,5;UBERON:0007689,7.49e-08,5;UBERON:0007123,7.49e-08,5;UBERON:0003091,7.49e-08,5 | |||
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|short_description=p@chr21:39704505..39704513,- | |||
}} | }} |
Latest revision as of 17:52, 28 July 2015
Short description: | p@chr21:39704505..39704513, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:39704505..39704513, - |
Coexpression cluster: | C2632_Synoviocyte_mesenchymal_tenocyte_thyroid_Nucleus_Skeletal_Myoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 7.06e-34 | 1 |
myotube | 7.06e-34 | 1 |
mesenchymal stem cell of the bone marrow | 4.86e-23 | 6 |
bone marrow cell | 2.84e-14 | 10 |
synovial cell | 1.85e-12 | 3 |
fibrocyte | 2.59e-12 | 3 |
tendon cell | 2.59e-12 | 3 |
striated muscle cell | 1.57e-09 | 4 |
skeletal muscle myoblast | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 1.85e-12 | 3 |
layer of synovial tissue | 1.85e-12 | 3 |
synovial joint | 1.85e-12 | 3 |
synovial membrane of synovial joint | 1.85e-12 | 3 |
dense regular connective tissue | 2.59e-12 | 3 |
tendon | 2.59e-12 | 3 |
regular connective tissue | 2.59e-12 | 3 |
thyroid gland | 7.49e-08 | 5 |
pharyngeal pouch | 7.49e-08 | 5 |
thyroid diverticulum | 7.49e-08 | 5 |
pharyngeal pouch 2 | 7.49e-08 | 5 |
thyroid primordium | 7.49e-08 | 5 |