FFCP PHASE1:Hg19::chr22:17092528..17092530,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr22:17092528..17092530,+ | |||
|coexpression_cluster_id=C157 | |||
|description=CAGE_peak_at_chr22:17092528..17092530,+ | |||
|id=chr22:17092528..17092530,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.99e-22!7;CL:0000586!2.99e-22!7;CL:0000066!5.71e-07!254;CL:0002178!6.14e-07!3;CL:0000349!8.62e-07!3;CL:0002577!8.62e-07!3;CL:0000322!9.12e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.64e-38;7!CL:0000586;1.64e-38;7!CL:0002178;3.66e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.80e-38,7;CL:0000586,1.80e-38,7;CL:0002178,3.27e-23,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.22e-27;10!UBERON:0005564;2.22e-27;10 | |||
|ontology_enrichment_disease=DOID:305!5.51e-12!106;DOID:299!6.09e-11!25;DOID:3493!8.69e-10!2;DOID:4468!1.22e-09!2;DOID:3910!1.57e-09!2;DOID:4929!1.71e-09!2;DOID:0050687!1.09e-08!143;DOID:3095!1.70e-07!22;DOID:2994!1.70e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3493;5.96e-34;2!DOID:3095;3.89e-13;22!DOID:2994;3.89e-13;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.04e-34,2;DOID:3095,4.01e-13,22;DOID:2994,4.01e-13,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.46e-19!8;UBERON:0004913!1.22e-17!1;UBERON:0003703!1.22e-17!1;UBERON:0001174!1.22e-17!1;UBERON:0004914!1.22e-17!1;UBERON:0003135!2.05e-14!11;UBERON:0004903!1.57e-09!2;UBERON:0002173!1.57e-09!2;UBERON:0002186!1.57e-09!2;UBERON:0003133!9.57e-09!48;UBERON:0000991!7.89e-08!21;UBERON:0009196!7.89e-08!21;UBERON:0009117!7.89e-08!21;UBERON:0005564!7.89e-08!21;UBERON:0004176!1.70e-07!22;UBERON:0003101!1.70e-07!22;UBERON:0000079!1.70e-07!22;UBERON:0005156!4.14e-07!59;UBERON:0000990!4.14e-07!59;UBERON:0004821!9.12e-07!3;UBERON:0003215!9.12e-07!3;UBERON:0002299!9.12e-07!3;UBERON:0006524!9.12e-07!3;UBERON:0008874!9.12e-07!3;UBERON:0002169!9.12e-07!3;UBERON:0004894!9.12e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.07e-34;8!UBERON:0003135;5.16e-25;11!UBERON:0000945;1.71e-14;5!UBERON:0010039;1.71e-14;5!UBERON:0000991;1.05e-13;21!UBERON:0003101;3.89e-13;22!UBERON:0000079;3.89e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.68e-34,8;UBERON:0003135,5.49e-25,11;UBERON:0000991,1.09e-13,21;UBERON:0009196,1.09e-13,21;UBERON:0009117,1.09e-13,21;UBERON:0005564,1.09e-13,21;UBERON:0004176,4.01e-13,22;UBERON:0003101,4.01e-13,22;UBERON:0000079,4.01e-13,22;UBERON:0000945,1.35e-09,8;UBERON:0010039,1.35e-09,8;UBERON:0002323,7.52e-07,46 | |||
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|short_description=p@chr22:17092528..17092530,+ | |||
}} | }} |
Latest revision as of 18:55, 28 July 2015
Short description: | p@chr22:17092528..17092530, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:17092528..17092530, + |
Coexpression cluster: | C157_testicular_H9_testis_iPS_teratocarcinoma_colon_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.80e-38 | 7 |
germ cell | 1.80e-38 | 7 |
epithelial cell of stomach | 3.27e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 7.68e-34 | 8 |
male reproductive organ | 5.49e-25 | 11 |
gonad | 1.09e-13 | 21 |
indifferent external genitalia | 1.09e-13 | 21 |
indifferent gonad | 1.09e-13 | 21 |
gonad primordium | 1.09e-13 | 21 |
external genitalia | 4.01e-13 | 22 |
male organism | 4.01e-13 | 22 |
male reproductive system | 4.01e-13 | 22 |
stomach | 1.35e-09 | 8 |
food storage organ | 1.35e-09 | 8 |
body cavity | 7.52e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.04e-34 | 2 |
germ cell and embryonal cancer | 4.01e-13 | 22 |
germ cell cancer | 4.01e-13 | 22 |