FFCP PHASE1:Hg19::chr2:160143059..160143080,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:160143059..160143080,- to FFCP PHASE1:Hg19::chr2:160143059..160143080,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=151525 | |EntrezGene=151525 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26697 | |HGNC=26697 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N9V3,D3DPA6 | |UniProt=Q8N9V3,D3DPA6 | ||
|association_with_transcript=0bp_to_ENST00000392796,NM_152528,uc002uaj.3_5end | |||
|cluster_id=chr2:160143059..160143080,- | |||
|description=CAGE_peak_5_at_WDSUB1_5end | |||
|id=chr2:160143059..160143080,- | |||
|ontology_enrichment_celltype=CL:0002076!3.43e-13!43;CL:0000066!1.69e-12!254;CL:0000223!2.99e-10!59;CL:0002251!6.94e-10!21 | |||
|ontology_enrichment_celltype_v019=CL:0000039;5.66e-07;7!CL:0000586;5.66e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.81e-07,253;CL:0000039,7.92e-07,7;CL:0000586,7.92e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.18e-16!106;DOID:1749!8.39e-13!14;DOID:0050687!7.38e-12!143;DOID:299!1.91e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.08e-07;14!DOID:3493;4.76e-07;2!DOID:5093;5.05e-07;4!DOID:1612;5.05e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.78e-12,106;DOID:0050687,4.39e-10,143;DOID:1749,2.36e-07,14;DOID:3493,2.77e-07,2;DOID:5093,3.77e-07,4;DOID:1612,3.77e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.35e-20!169;UBERON:0000925!9.35e-20!169;UBERON:0006595!9.35e-20!169;UBERON:0001007!1.45e-15!155;UBERON:0001555!1.45e-15!155;UBERON:0007026!1.45e-15!155;UBERON:0004921!4.70e-14!129;UBERON:0004185!4.70e-14!129;UBERON:0000077!5.50e-14!130;UBERON:0001004!8.39e-12!72;UBERON:0007023!4.90e-09!115;UBERON:0000065!7.28e-09!53;UBERON:0005153!1.10e-08!37;UBERON:0001041!1.43e-08!98;UBERON:0000161!2.08e-08!35;UBERON:0000344!1.06e-07!12;UBERON:0005631!2.73e-07!14;UBERON:0000158!2.73e-07!14;UBERON:0000464!3.00e-07!104;UBERON:0000062!3.36e-07!511;UBERON:0005156!3.80e-07!59;UBERON:0000990!3.80e-07!59;UBERON:0000064!8.62e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000974;4.55e-08;6!UBERON:0001987;2.34e-07;4!UBERON:0003343;2.82e-07;4!UBERON:0004785;2.82e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.57e-07,4;UBERON:0004785,1.57e-07,4;UBERON:0001987,2.14e-07,4;UBERON:0004340,2.14e-07,4;UBERON:0004119,3.64e-07,160;UBERON:0000925,3.64e-07,160;UBERON:0006595,3.64e-07,160 | |||
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| ||
|short_description=p5@WDSUB1 | |||
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Latest revision as of 18:40, 17 September 2015
Short description: | p5@WDSUB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_WDSUB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000392796, NM_152528, uc002uaj.3_5end |
EntrezGene: | WDSUB1 |
HGNC: | 26697 |
UniProt: | Q8N9V3D3DPA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.81e-07 | 253 |
germ line cell | 7.92e-07 | 7 |
germ cell | 7.92e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.57e-07 | 4 |
respiratory system mucosa | 1.57e-07 | 4 |
placenta | 2.14e-07 | 4 |
allantois | 2.14e-07 | 4 |
endoderm-derived structure | 3.64e-07 | 160 |
endoderm | 3.64e-07 | 160 |
presumptive endoderm | 3.64e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.78e-12 | 106 |
cell type cancer | 4.39e-10 | 143 |
squamous cell carcinoma | 2.36e-07 | 14 |
signet ring cell adenocarcinoma | 2.77e-07 | 2 |
thoracic cancer | 3.77e-07 | 4 |
breast cancer | 3.77e-07 | 4 |