FFCP PHASE1:Hg19::chr2:219283836..219283853,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr2:219283836..219283853,+ to FFCP PHASE1:Hg19::chr2:219283836..219283853,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7429 | |EntrezGene=7429 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12690 | |HGNC=12690 | ||
|TSSclassifier=strong | |||
|UniProt=B4DV78,C9J2B5,P09327,Q53F91 | |UniProt=B4DV78,C9J2B5,P09327,Q53F91 | ||
|association_with_transcript=0bp_to_ENST00000392114,ENST00000454069,NM_007127,uc002via.2,uc010zke.1_5end | |||
|cluster_id=chr2:219283836..219283853,+ | |||
|coexpression_cluster_id=C579 | |||
|description=CAGE_peak_1_at_VIL1_5end | |||
|id=chr2:219283836..219283853,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.42e-13!12;CL:0000417!4.42e-13!12;CL:0000668!4.42e-13!12;CL:0000414!4.42e-13!12;CL:0000412!4.42e-13!12;CL:0000182!4.42e-13!12;CL:0002322!2.89e-12!5;CL:0000223!2.48e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.98e-18;12!CL:0002322;9.27e-17;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.87e-18,12;CL:0002322,9.44e-17,5;CL:0000223,5.70e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.47e-21;13!UBERON:0004161;1.77e-20;11!UBERON:0003104;1.88e-14;31!UBERON:0001041;3.07e-08;30 | |||
|ontology_enrichment_disease=DOID:3119!3.35e-08!14;DOID:305!4.92e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:3119;6.91e-09;14!DOID:3493;1.61e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,7.59e-09,14;DOID:3493,1.67e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0005409!3.39e-19!35;UBERON:0009854!7.70e-19!23;UBERON:0009856!1.20e-18!26;UBERON:0004921!3.92e-18!129;UBERON:0004185!3.92e-18!129;UBERON:0009497!4.48e-17!25;UBERON:0000015!4.48e-17!25;UBERON:0002423!4.48e-17!25;UBERON:0006235!4.48e-17!25;UBERON:0004161!4.48e-17!25;UBERON:0008835!6.00e-17!22;UBERON:0003894!6.00e-17!22;UBERON:0007499!7.87e-17!25;UBERON:0000160!1.65e-15!27;UBERON:0001007!2.10e-15!155;UBERON:0001555!2.10e-15!155;UBERON:0007026!2.10e-15!155;UBERON:0002107!1.77e-14!19;UBERON:0006925!1.77e-14!19;UBERON:0008836!1.77e-14!19;UBERON:0005057!1.55e-13!26;UBERON:0004119!2.86e-13!169;UBERON:0000925!2.86e-13!169;UBERON:0006595!2.86e-13!169;UBERON:0003929!2.93e-12!54;UBERON:0000059!2.23e-11!11;UBERON:0000077!3.73e-11!130;UBERON:0001041!4.59e-10!98;UBERON:0002365!2.34e-09!31;UBERON:0002330!2.34e-09!31;UBERON:0002368!2.83e-09!35;UBERON:0004907!4.66e-09!5;UBERON:0000949!5.88e-09!45;UBERON:0005911!2.92e-08!82;UBERON:0005172!5.38e-08!55;UBERON:0005173!5.38e-08!55;UBERON:0000466!7.38e-08!126;UBERON:0001155!1.87e-07!9;UBERON:0002417!7.66e-07!61;UBERON:0000916!7.66e-07!61;UBERON:0001052!7.88e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.48e-33;22!UBERON:0000160;7.88e-28;17!UBERON:0002423;1.63e-21;25!UBERON:0004921;2.35e-19;33!UBERON:0002107;2.15e-17;19!UBERON:0006925;2.15e-17;19!UBERON:0000059;5.17e-16;11!UBERON:0002108;2.24e-12;4!UBERON:0004907;2.31e-12;5!UBERON:0001007;3.65e-11;81!UBERON:0001155;2.21e-10;9!UBERON:0002365;1.17e-09;31!UBERON:0002330;1.17e-09;31!UBERON:0001052;3.30e-09;4!UBERON:0002368;2.10e-08;33!UBERON:0000945;3.94e-07;5!UBERON:0010039;3.94e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,5.42e-29,25;UBERON:0000160,8.89e-28,17;UBERON:0009854,1.45e-23,23;UBERON:0009497,1.73e-21,25;UBERON:0000015,1.73e-21,25;UBERON:0002423,1.73e-21,25;UBERON:0006235,1.73e-21,25;UBERON:0004161,1.73e-21,25;UBERON:0008835,5.73e-21,22;UBERON:0003894,5.73e-21,22;UBERON:0009856,1.71e-20,26;UBERON:0004921,1.01e-18,118;UBERON:0007499,3.97e-18,25;UBERON:0002107,2.12e-17,19;UBERON:0006925,2.12e-17,19;UBERON:0008836,2.12e-17,19;UBERON:0000059,5.11e-16,11;UBERON:0001007,3.43e-15,145;UBERON:0001555,3.43e-15,145;UBERON:0007026,3.43e-15,145;UBERON:0003929,1.61e-13,54;UBERON:0004119,4.34e-13,160;UBERON:0000925,4.34e-13,160;UBERON:0006595,4.34e-13,160;UBERON:0004907,2.28e-12,5;UBERON:0002108,2.63e-12,4;UBERON:0001155,2.19e-10,9;UBERON:0005172,5.93e-10,54;UBERON:0005173,5.93e-10,54;UBERON:0002365,7.09e-10,31;UBERON:0002330,7.09e-10,31;UBERON:0001052,3.30e-09,4;UBERON:0005911,8.51e-09,82;UBERON:0011216,1.14e-08,223;UBERON:0002417,1.19e-08,60;UBERON:0000916,1.19e-08,60;UBERON:0002368,1.60e-08,35;UBERON:0001041,7.88e-08,87;UBERON:0000949,1.40e-07,45 | |||
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| ||
|short_description=p1@VIL1 | |||
}} | }} |
Latest revision as of 17:40, 24 September 2015
Short description: | p1@VIL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VIL1_5end |
Coexpression cluster: | C579_small_argyrophil_colon_duodenum_signet_temporal_Intestinal |
Association with transcript: | 0bp_to_ENST00000392114, ENST00000454069, NM_007127, uc002via.2, uc010zke.1_5end |
EntrezGene: | VIL1 |
HGNC: | 12690 |
UniProt: | B4DV78C9J2B5P09327Q53F91 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.87e-18 | 12 |
embryonic stem cell | 9.44e-17 | 5 |
endodermal cell | 5.70e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 7.59e-09 | 14 |
signet ring cell adenocarcinoma | 1.67e-08 | 2 |