FFCP PHASE1:Hg19::chr2:47748819..47748840,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:47748819..47748840,- to FFCP PHASE1:Hg19::chr2:47748819..47748840,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:47748819..47748840,- | |||
|description=CAGE_peak_at_chr2:47748819..47748840,- | |||
|id=chr2:47748819..47748840,- | |||
|ontology_enrichment_celltype=CL:0000542!2.04e-11!53;CL:0000051!2.04e-11!53;CL:0000838!9.97e-11!52;CL:0000624!1.01e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000167;9.42e-10;1!CL:0000164;9.42e-10;1!CL:0000502;9.42e-10;1!CL:0000172;9.42e-10;1!CL:0000173;9.42e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,9.44e-10,1;CL:0000164,9.44e-10,1;CL:0000502,9.44e-10,1;CL:0000172,9.44e-10,1;CL:0000173,9.44e-10,1;CL:0002351,9.44e-10,1 | |||
|ontology_enrichment_development_v019=CL:0002351;9.42e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.35e-18;4!DOID:1612;1.35e-18;4!DOID:4430;9.42e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.53e-18,4;DOID:1612,1.53e-18,4;DOID:4430,9.44e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.14e-12!57;UBERON:0005068!1.14e-12!57;UBERON:0006241!1.14e-12!57;UBERON:0007135!1.14e-12!57;UBERON:0007023!5.01e-11!115;UBERON:0002780!1.10e-09!41;UBERON:0001890!1.10e-09!41;UBERON:0006240!1.10e-09!41;UBERON:0002020!2.60e-09!34;UBERON:0003528!2.60e-09!34;UBERON:0003080!2.67e-09!42;UBERON:0001893!3.57e-09!34;UBERON:0002616!3.97e-09!59;UBERON:0001017!4.68e-09!82;UBERON:0005743!6.22e-09!86;UBERON:0000073!6.68e-09!94;UBERON:0001016!6.68e-09!94;UBERON:0002791!1.29e-08!33;UBERON:0001869!5.10e-08!32;UBERON:0002346!8.72e-08!90;UBERON:0002308!1.24e-07!9;UBERON:0000125!1.24e-07!9;UBERON:0003075!2.64e-07!86;UBERON:0007284!2.64e-07!86;UBERON:0000955!4.06e-07!69;UBERON:0006238!4.06e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002581;3.12e-09;1!UBERON:0001874;3.12e-09;1!UBERON:0000178;6.79e-09;15!UBERON:0000179;6.79e-09;15!UBERON:0000463;6.79e-09;15!UBERON:0002331;7.33e-08;10!UBERON:0000310;9.37e-08;10!UBERON:0001443;4.32e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,3.53e-09,1;UBERON:0002581,4.87e-09,1;UBERON:0000178,6.33e-09,15;UBERON:0000179,6.33e-09,15;UBERON:0000463,6.33e-09,15;UBERON:0002331,6.75e-08,10;UBERON:0000358,6.75e-08,10;UBERON:0000307,6.75e-08,10;UBERON:0000091,6.75e-08,10;UBERON:0000087,6.75e-08,10;UBERON:0007010,6.75e-08,10;UBERON:0007806,6.75e-08,10;UBERON:0008780,6.75e-08,10;UBERON:0005728,6.75e-08,10;UBERON:0000310,9.82e-08,10;UBERON:0001443,4.51e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3876784853043,0.568676929949686,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0.954053754535364,0.569212969109448,0.587237189370939,0.764546456250458,0,0,0,0.590129310341499,0.786021525498329,1.64481199199607,0.334372990781356,0.32592226663359,0.473447805734733,0,0.445641827540694,0.294605907474837,0.443067789167242,0,0.384273959177026,0.260118695119756,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0.766440987203842,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.534880391567015,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,1.18800285728205,0.741800787835671,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0.616339038092582,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.431255149719035,0.77005821767849,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.426910231213777,0,3.32870879020994,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0.650756789328606,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0.62962469366128,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0.78494864019923,0.179872457583315,0,0.235624804691373,0,0,0,0,0,1.05650146756755,0,0.282810863907425,0,0,0,0.876901770507525,0.578775534266688,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0.557409525377156,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0.447352215784832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.828851746593443,0,0,0,0,0,0,1.53471711068062,0,2.3948309234694,0,0,0.278304294485554,0,1.04171104434093,0.437299999980979,0,0,0,0,0.689486746482929,0,0.173624994933292,0,0.60298219312704,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,2.37216902944498,2.47127877893006,1.56632924258183,0.202203398942031,0,0.937057782901357,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,1.80126086612937,0.410716136675979,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,1.08599920350743,0.864221491201268,0.653174720218818,0,0,0.170388021785422,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0,0.395223263795889,1.58330377895165,0,0,0,0,0,0,0,0.488105059607853,0.3755727921195,1.14681839138014,0.110929051536852,0.310482014706917,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0.465788870628778,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0.127894371303652,0,0.157265941855896,0.54604819096007,0,0.212574920101683,0,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0.319267718114302,1.02558182120378,0,0.345786262321089,0.968853873791107,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.570742291745161,0,0,0,0.527613733078862,0,1.07140367175657,0,0,0,0.0887023701626388,0,0,0.475788130837822,1.05236437700559,0,0,0,1.09980912941201,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935757853848423,0,0,0,0.109940516745429,2.56636834063345,0.0771741581079447,0,1.41095188908457,0,3.29947165942276,0.588925401344836,0.297046400327086,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0.286679166302903,0,0.679914901909147,0,0,0,0,0,0,0,0.126698501011437,0.203977659483963,0,0,0,0.151557396436479,0,0,0.20686599172379,0,0,0.258355639344024,0.124149428591716,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3876784853043,0.568676929949686,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0.661044872784862,0.954053754535364,0.569212969109448,0.587237189370939,0.764546456250458,0,0,0,0.590129310341499,0.786021525498329,1.64481199199607,0.334372990781356,0.32592226663359,0.473447805734733,0,0.445641827540694,0.294605907474837,0.443067789167242,0,0.384273959177026,0.260118695119756,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0.766440987203842,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0.534880391567015,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,1.18800285728205,0.741800787835671,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37061319387782,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0.616339038092582,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0.431255149719035,0.77005821767849,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.426910231213777,0,3.32870879020994,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0.650756789328606,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0.2023155617111,0,0.62962469366128,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0.318203247925937,0.78494864019923,0.179872457583315,0,0.235624804691373,0,0,0,0,0,1.05650146756755,0,0.282810863907425,0,0,0,0.876901770507525,0.578775534266688,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0.557409525377156,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0.447352215784832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.828851746593443,0,0,0,0,0,0,1.53471711068062,0,2.3948309234694,0,0,0.278304294485554,0,1.04171104434093,0.437299999980979,0,0,0,0,0.689486746482929,0,0.173624994933292,0,0.60298219312704,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,2.37216902944498,2.47127877893006,1.56632924258183,0.202203398942031,0,0.937057782901357,0.547364367646998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,1.80126086612937,0.410716136675979,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,1.08599920350743,0.864221491201268,0.653174720218818,0,0,0.170388021785422,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0,0.395223263795889,1.58330377895165,0,0,0,0,0,0,0,0.488105059607853,0.3755727921195,1.14681839138014,0.110929051536852,0.310482014706917,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0.465788870628778,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0.19998739585493,0,0.172214979660816,0,0,0,0,0.127894371303652,0,0.157265941855896,0.54604819096007,0,0.212574920101683,0,0,0,0,0.80057074828547,0,0,0.128458450192919,0,0.319267718114302,1.02558182120378,0,0.345786262321089,0.968853873791107,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.202612753855184,0,0,0.570742291745161,0,0,0,0.527613733078862,0,1.07140367175657,0,0,0,0.0887023701626388,0,0,0.475788130837822,1.05236437700559,0,0,0,1.09980912941201,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935757853848423,0,0,0,0.109940516745429,2.56636834063345,0.0771741581079447,0,1.41095188908457,0,3.29947165942276,0.588925401344836,0.297046400327086,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,0.286679166302903,0,0.679914901909147,0,0,0,0,0,0,0,0.126698501011437,0.203977659483963,0,0,0,0.151557396436479,0,0,0.20686599172379,0,0,0.258355639344024,0.124149428591716,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0.122241444182866,0.406896178315738,0,0.402547587182052,0 | ||
|short_description=p@chr2:47748819..47748840,- | |||
}} | }} |
Latest revision as of 10:36, 29 July 2015
Short description: | p@chr2:47748819..47748840, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:47748819..47748840, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 9.44e-10 | 1 |
enteroendocrine cell | 9.44e-10 | 1 |
type D enteroendocrine cell | 9.44e-10 | 1 |
somatostatin secreting cell | 9.44e-10 | 1 |
pancreatic D cell | 9.44e-10 | 1 |
progenitor cell of endocrine pancreas | 9.44e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
putamen | 3.53e-09 | 1 |
postcentral gyrus | 4.87e-09 | 1 |
blood | 6.33e-09 | 15 |
haemolymphatic fluid | 6.33e-09 | 15 |
organism substance | 6.33e-09 | 15 |
umbilical cord | 6.75e-08 | 10 |
blastocyst | 6.75e-08 | 10 |
blastula | 6.75e-08 | 10 |
bilaminar disc | 6.75e-08 | 10 |
inner cell mass | 6.75e-08 | 10 |
cleaving embryo | 6.75e-08 | 10 |
connecting stalk | 6.75e-08 | 10 |
inner cell mass derived epiblast | 6.75e-08 | 10 |
extraembryonic mesoderm | 6.75e-08 | 10 |
breast | 9.82e-08 | 10 |
chest | 4.51e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.53e-18 | 4 |
breast cancer | 1.53e-18 | 4 |
somatostatinoma | 9.44e-10 | 1 |