FFCP PHASE1:Hg19::chr2:74211227..74211238,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr2:74211227..74211238,+ to FFCP PHASE1:Hg19::chr2:74211227..74211238,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:74211227..74211238,+ | |||
|description=CAGE_peak_at_chr2:74211227..74211238,+ | |||
|id=chr2:74211227..74211238,+ | |||
|ontology_enrichment_celltype=CL:0002076!5.44e-20!43;CL:0000066!1.77e-17!254;CL:0000223!4.05e-15!59;CL:0002368!1.42e-11!13;CL:0002202!1.26e-10!9;CL:0002632!1.26e-10!9;CL:0002159!3.42e-10!13;CL:0000622!4.45e-10!5;CL:0002251!1.09e-08!21;CL:0000082!1.76e-08!19;CL:0000154!2.64e-08!6;CL:0002328!1.66e-07!3;CL:0000150!1.87e-07!9;CL:0000076!8.06e-07!62 | |||
|ontology_enrichment_celltype_v019=CL:0002328;1.38e-37;3!CL:0002368;1.00e-23;13!CL:0002202;2.99e-22;9!CL:0002632;2.99e-22;9!CL:0002076;1.35e-10;42!CL:0001014;9.24e-08;2!CL:0001016;9.24e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,5.76e-38,3;CL:0002368,1.22e-23,13;CL:0002202,2.69e-22,9;CL:0002632,2.69e-22,9;CL:0002076,6.87e-14,42;CL:0000223,6.70e-10,58;CL:0001014,9.25e-08,2;CL:0001016,9.25e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0008425;9.72e-14;1 | |||
|ontology_enrichment_disease=DOID:1749!5.11e-14!14;DOID:305!5.73e-14!106;DOID:0050687!1.63e-08!143;DOID:299!3.37e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:3493;1.02e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.05e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!8.21e-13!169;UBERON:0000925!8.21e-13!169;UBERON:0006595!8.21e-13!169;UBERON:0005153!3.07e-12!37;UBERON:0005178!3.57e-12!34;UBERON:0002224!3.57e-12!34;UBERON:0005181!1.08e-11!35;UBERON:0005157!6.36e-11!51;UBERON:0001004!6.81e-11!72;UBERON:0001007!6.93e-11!155;UBERON:0001555!6.93e-11!155;UBERON:0007026!6.93e-11!155;UBERON:0000915!8.98e-10!52;UBERON:0000077!1.68e-09!130;UBERON:0003729!4.52e-09!5;UBERON:0004921!1.03e-08!129;UBERON:0004185!1.03e-08!129;UBERON:0004802!1.76e-08!19;UBERON:0000115!1.76e-08!19;UBERON:0002048!2.09e-08!22;UBERON:0000117!2.09e-08!22;UBERON:0000171!2.09e-08!22;UBERON:0000170!2.09e-08!22;UBERON:0005597!2.09e-08!22;UBERON:0000118!2.09e-08!22;UBERON:0003343!6.60e-08!4;UBERON:0004785!6.60e-08!4;UBERON:0004815!1.66e-07!3;UBERON:0002031!1.66e-07!3;UBERON:0001041!2.05e-07!98;UBERON:0005911!2.45e-07!82;UBERON:0000161!2.59e-07!35;UBERON:0000062!2.84e-07!511;UBERON:0000065!3.64e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.38e-37;3!UBERON:0002031;1.38e-37;3!UBERON:0002185;7.35e-23;5!UBERON:0000485;1.59e-16;7!UBERON:0007196;1.75e-13;15!UBERON:0001558;1.75e-13;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,5.76e-38,3;UBERON:0002031,5.76e-38,3;UBERON:0002185,4.36e-23,5;UBERON:0007196,1.64e-13,15;UBERON:0001558,1.64e-13,15;UBERON:0000485,4.06e-13,9;UBERON:0005631,1.45e-08,14;UBERON:0000158,1.45e-08,14;UBERON:0003124,4.75e-08,7;UBERON:0001004,1.26e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,1.8072355126695,1.10926203050036,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,1.1240175325762,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0.335964256397719,0.141775097242386,0,0.581267877027924,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.460404944679482,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,1.02090169995667,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,1.08890984861323,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,1.19372242368845,0.593929361665277,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,2.68531762013414,0,0,0,0,0,0,0,0.7812832832557,1.22443999994674,0,0.1137934482855,0.508507300585533,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0,0,0.269272933229316,0,1.27600463892768,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0.489698424477443,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0.881931576729399,0.34823682632161,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0.14405479798815,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0.0787831823072236,0,0,0,0.0846733320657845,0,0,0,0,0,0.674921674654501,6.1904156364636,0,0.335434687599266,0.157611414598396,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37406805901436,0.825788063434183,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0.333694205676207,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0.207216164163037,0.51215543128185,1.38251932362818,0,0,0,0,0.4582137370881,0,0,0.559277158988962,0.392600934460972,2.07260472469858,0,0,0,0.485710993059139,0,0,0,0.90356865631168,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0.71421575442263,0,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0.336760265072938,0,0,0.814032686109745,0.106727345877715,0,0,0,0,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,1.8072355126695,1.10926203050036,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439001141634502,1.1240175325762,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0.335964256397719,0.141775097242386,0,0.581267877027924,0.383382679165211,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601519410909855,0.460404944679482,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,1.02090169995667,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0.670302275535787,1.08890984861323,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,1.19372242368845,0.593929361665277,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,2.68531762013414,0,0,0,0,0,0,0,0.7812832832557,1.22443999994674,0,0.1137934482855,0.508507300585533,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0,0,0.269272933229316,0,1.27600463892768,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0.489698424477443,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0.881931576729399,0.34823682632161,0,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0.14405479798815,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0.0787831823072236,0,0,0,0.0846733320657845,0,0,0,0,0,0.674921674654501,6.1904156364636,0,0.335434687599266,0.157611414598396,0.0524545881349981,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37406805901436,0.825788063434183,0.183428598521679,0.115525666150338,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0.333694205676207,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0.207216164163037,0.51215543128185,1.38251932362818,0,0,0,0,0.4582137370881,0,0,0.559277158988962,0.392600934460972,2.07260472469858,0,0,0,0.485710993059139,0,0,0,0.90356865631168,0,0.150962843566674,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0.71421575442263,0,0.320965466756673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0.336760265072938,0,0,0.814032686109745,0.106727345877715,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p@chr2:74211227..74211238,+ | |||
}} | }} |
Latest revision as of 12:13, 29 July 2015
Short description: | p@chr2:74211227..74211238, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:74211227..74211238, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 5.76e-38 | 3 |
respiratory epithelial cell | 1.22e-23 | 13 |
epithelial cell of tracheobronchial tree | 2.69e-22 | 9 |
epithelial cell of lower respiratory tract | 2.69e-22 | 9 |
endo-epithelial cell | 6.87e-14 | 42 |
endodermal cell | 6.70e-10 | 58 |
CD1a-positive Langerhans cell | 9.25e-08 | 2 |
immature CD1a-positive Langerhans cell | 9.25e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 5.76e-38 | 3 |
epithelium of bronchus | 5.76e-38 | 3 |
bronchus | 4.36e-23 | 5 |
tracheobronchial tree | 1.64e-13 | 15 |
lower respiratory tract | 1.64e-13 | 15 |
simple columnar epithelium | 4.06e-13 | 9 |
extraembryonic membrane | 1.45e-08 | 14 |
membranous layer | 1.45e-08 | 14 |
chorion | 4.75e-08 | 7 |
respiratory system | 1.26e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.05e-07 | 2 |