FFCP PHASE1:Hg19::chr4:48683194..48683232,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:48683194..48683232,- to FFCP PHASE1:Hg19::chr4:48683194..48683232,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285527 | |EntrezGene=285527 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29127 | |HGNC=29127 | ||
|TSSclassifier=strong | |||
|UniProt=D6R9B9 | |UniProt=D6R9B9 | ||
|association_with_transcript=-6bp_to_ENST00000505759_5end | |||
|cluster_id=chr4:48683194..48683232,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_3_at_FRYL_5end | |||
|id=chr4:48683194..48683232,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;2.03e-13;2!CL:0000558;2.03e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.03e-13,2;CL:0000765,2.03e-13,2;CL:0000050,2.03e-13,2;CL:0000038,2.03e-13,2;CL:0000558,2.03e-13,2;CL:0000547,2.03e-13,2;CL:0000549,2.03e-13,2;CL:0000550,2.03e-13,2;CL:0000552,2.03e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.10e-07;1!UBERON:0006242;5.45e-07;1 | |||
|ontology_enrichment_disease=DOID:1036!5.91e-10!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.92e-17;8!DOID:8692;1.10e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.89e-17,8;DOID:8692,5.38e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.76e-21!115;UBERON:0005409!1.97e-10!35;UBERON:0000160!5.87e-09!27;UBERON:0000178!1.70e-08!15;UBERON:0000179!1.70e-08!15;UBERON:0000463!1.70e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;3.26e-20;17!UBERON:0005409;1.34e-19;22!UBERON:0000178;2.08e-17;15!UBERON:0000179;2.08e-17;15!UBERON:0000463;2.08e-17;15!UBERON:0000059;1.60e-13;11!UBERON:0004921;5.70e-12;33!UBERON:0002108;1.86e-11;4!UBERON:0001155;4.62e-11;9!UBERON:0002390;7.99e-10;32!UBERON:0001154;2.10e-07;1!UBERON:0001153;2.10e-07;1!UBERON:0009854;2.10e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.64e-21,25;UBERON:0000160,3.06e-20,17;UBERON:0000178,1.61e-17,15;UBERON:0000179,1.61e-17,15;UBERON:0000463,1.61e-17,15;UBERON:0000059,1.52e-13,11;UBERON:0002108,1.83e-11,4;UBERON:0001155,4.62e-11,9;UBERON:0007023,2.54e-08,114;UBERON:0001154,2.10e-07,1;UBERON:0001153,2.10e-07,1;UBERON:0001045,2.10e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0.790152254325231,0,0.393010762749165,0,0,0,0,0,0.334231370655521,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0.352193736052904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,163.129348224575,136.207869983973,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,2.02979043692868,3.0585488285695,2.84823593587081,0.476463550915578,1.64544909234478,2.59389324477087,1.62009431171434,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50565556505718,0,1.08182271390393,0,0,4.49137296979728,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.597743964753209,20.7212936648361,0.251932747854276,0,0,0,0,1.43216939740487,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,1.57916962432026,1.56850027454192,1.34257269580674,5.88236571444974,4.92703394839174,0,0,0,0,60.7109777957888,36.1791438818657,53.1596226092254,0,0,0,0.134802265961354,0,0,0,0,0,0,4.83962864194656,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,2.56143593687223,0,0.432271251462318,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.739018197353989,0,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.315222829196793,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.985110248992068,0,0,0.293104467356165,5.30027555648885,0,0,0,0,0.533937062838473,7.54580664478397,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,2.73947616152849,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,6.33973209907801,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0.109940516745429,0,24.1555114877867,7.6495846176385,0.470317296361523,0,0.235676547101626,0,0,0,0,0,4.70542582207113,0,0,0,0,4.3820183294791,0,0,0,0.0679914901909147,0,10.0515099697926,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,2.13233981900981,0.23806443146374,0.129177819672012,0.186224142887574,0,0,0.202117188958219,0,0,0.0673520530145875,0.932388670104793,0.332660356546013,0,0,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,0.790152254325231,0,0.393010762749165,0,0,0,0,0,0.334231370655521,0,0,0,0,0.260118695119756,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0.492663237895943,0.352193736052904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,163.129348224575,136.207869983973,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41215701165169,0,0,0,0,2.02979043692868,3.0585488285695,2.84823593587081,0.476463550915578,1.64544909234478,2.59389324477087,1.62009431171434,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50565556505718,0,1.08182271390393,0,0,4.49137296979728,0,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0.597743964753209,20.7212936648361,0.251932747854276,0,0,0,0,1.43216939740487,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0.498635045700469,1.57916962432026,1.56850027454192,1.34257269580674,5.88236571444974,4.92703394839174,0,0,0,0,60.7109777957888,36.1791438818657,53.1596226092254,0,0,0,0.134802265961354,0,0,0,0,0,0,4.83962864194656,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,2.56143593687223,0,0.432271251462318,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0.739018197353989,0,0,0.0787831823072236,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.315222829196793,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.985110248992068,0,0,0.293104467356165,5.30027555648885,0,0,0,0,0.533937062838473,7.54580664478397,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,2.73947616152849,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,6.33973209907801,0.647428837187895,0,0,0.485710993059139,0,0,0,0,0.109940516745429,0,24.1555114877867,7.6495846176385,0.470317296361523,0,0.235676547101626,0,0,0,0,0,4.70542582207113,0,0,0,0,4.3820183294791,0,0,0,0.0679914901909147,0,10.0515099697926,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,2.13233981900981,0.23806443146374,0.129177819672012,0.186224142887574,0,0,0.202117188958219,0,0,0.0673520530145875,0.932388670104793,0.332660356546013,0,0,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p3@FRYL | |||
}} | }} |
Latest revision as of 22:59, 17 September 2015
Short description: | p3@FRYL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FRYL_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -6bp_to_ENST00000505759_5end |
EntrezGene: | FRYL |
HGNC: | 29127 |
UniProt: | D6R9B9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.03e-13 | 2 |
erythroblast | 2.03e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 2.03e-13 | 2 |
erythroid progenitor cell | 2.03e-13 | 2 |
reticulocyte | 2.03e-13 | 2 |
proerythroblast | 2.03e-13 | 2 |
basophilic erythroblast | 2.03e-13 | 2 |
polychromatophilic erythroblast | 2.03e-13 | 2 |
orthochromatic erythroblast | 2.03e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.64e-21 | 25 |
intestine | 3.06e-20 | 17 |
blood | 1.61e-17 | 15 |
haemolymphatic fluid | 1.61e-17 | 15 |
organism substance | 1.61e-17 | 15 |
large intestine | 1.52e-13 | 11 |
small intestine | 1.83e-11 | 4 |
colon | 4.62e-11 | 9 |
adult organism | 2.54e-08 | 114 |
vermiform appendix | 2.10e-07 | 1 |
caecum | 2.10e-07 | 1 |
midgut | 2.10e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.89e-17 | 8 |
myeloid leukemia | 5.38e-08 | 31 |