FFCP PHASE1:Hg19::chr6:30029089..30029122,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:30029089..30029122,+ to FFCP PHASE1:Hg19::chr6:30029089..30029122,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=30834 | |EntrezGene=30834 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13182 | |HGNC=13182 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000463141_5end | |||
|cluster_id=chr6:30029089..30029122,+ | |||
|description=CAGE_peak_3_at_ZNRD1_5end | |||
|id=chr6:30029089..30029122,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.95e-25!254;CL:0002321!4.65e-19!248;CL:0000220!1.02e-18!246;CL:0000548!3.95e-15!679;CL:0000004!3.95e-15!679;CL:0000255!3.95e-15!679;CL:0000012!4.61e-15!682;CL:0000055!1.74e-12!180;CL:0000222!4.86e-08!119;CL:0000223!1.39e-07!59;CL:0000144!3.64e-07!625 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.01e-25,253;CL:0002321,9.44e-20,250;CL:0000222,1.31e-08,121;CL:0000223,2.16e-07,58;CL:0000393,9.72e-07,61;CL:0000211,9.72e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!4.37e-11!143;DOID:305!1.41e-09!106;DOID:162!4.44e-08!235;DOID:14566!1.11e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,4.26e-11,143;DOID:305,1.38e-09,106;DOID:162,5.95e-08,235;DOID:14566,1.47e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.34e-14!238;UBERON:0009142!1.34e-14!238;UBERON:0002100!3.10e-10!216;UBERON:0004119!6.05e-10!169;UBERON:0000925!6.05e-10!169;UBERON:0006595!6.05e-10!169;UBERON:0000481!6.60e-10!347;UBERON:0005256!1.02e-08!143;UBERON:0000490!1.14e-08!138;UBERON:0003914!1.94e-08!118;UBERON:0001007!2.85e-08!155;UBERON:0001555!2.85e-08!155;UBERON:0007026!2.85e-08!155;UBERON:0001048!7.16e-08!168;UBERON:0000486!2.09e-07!82;UBERON:0004921!2.20e-07!129;UBERON:0004185!2.20e-07!129;UBERON:0000077!6.75e-07!130;UBERON:0001041!9.33e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0000072;5.65e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,3.70e-11,160;UBERON:0009142,3.70e-11,160;UBERON:0000490,1.31e-10,148;UBERON:0002100,2.85e-10,199;UBERON:0004119,9.17e-10,160;UBERON:0000925,9.17e-10,160;UBERON:0006595,9.17e-10,160;UBERON:0007503,1.48e-08,78;UBERON:0003914,2.98e-08,117;UBERON:0005256,5.01e-08,122;UBERON:0001007,6.97e-08,145;UBERON:0001555,6.97e-08,145;UBERON:0007026,6.97e-08,145;UBERON:0000486,1.10e-07,83;UBERON:0001048,2.30e-07,160;UBERON:0004921,9.58e-07,118;UBERON:0002329,9.79e-07,71;UBERON:0003059,9.79e-07,71;UBERON:0007282,9.79e-07,71;UBERON:0004290,9.79e-07,71;UBERON:0009618,9.79e-07,71 | |||
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| ||
|short_description=p3@ZNRD1 | |||
}} | }} |
Latest revision as of 15:23, 17 September 2015
Short description: | p3@ZNRD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZNRD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000463141_5end |
EntrezGene: | ZNRD1 |
HGNC: | 13182 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.01e-25 | 253 |
embryonic cell | 9.44e-20 | 250 |
mesodermal cell | 1.31e-08 | 121 |
endodermal cell | 2.16e-07 | 58 |
electrically responsive cell | 9.72e-07 | 61 |
electrically active cell | 9.72e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 3.70e-11 | 160 |
entire embryonic mesenchyme | 3.70e-11 | 160 |
unilaminar epithelium | 1.31e-10 | 148 |
trunk | 2.85e-10 | 199 |
endoderm-derived structure | 9.17e-10 | 160 |
endoderm | 9.17e-10 | 160 |
presumptive endoderm | 9.17e-10 | 160 |
epithelial vesicle | 1.48e-08 | 78 |
epithelial tube | 2.98e-08 | 117 |
trunk mesenchyme | 5.01e-08 | 122 |
digestive system | 6.97e-08 | 145 |
digestive tract | 6.97e-08 | 145 |
primitive gut | 6.97e-08 | 145 |
multilaminar epithelium | 1.10e-07 | 83 |
primordium | 2.30e-07 | 160 |
subdivision of digestive tract | 9.58e-07 | 118 |
somite | 9.79e-07 | 71 |
presomitic mesoderm | 9.79e-07 | 71 |
presumptive segmental plate | 9.79e-07 | 71 |
dermomyotome | 9.79e-07 | 71 |
trunk paraxial mesoderm | 9.79e-07 | 71 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 4.26e-11 | 143 |
carcinoma | 1.38e-09 | 106 |
cancer | 5.95e-08 | 235 |
disease of cellular proliferation | 1.47e-07 | 239 |