FFCP PHASE1:Hg19::chr7:12971296..12971310,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr7:12971296..12971310,+ to FFCP PHASE1:Hg19::chr7:12971296..12971310,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:12971296..12971310,+ | |||
|coexpression_cluster_id=C1985 | |||
|description=CAGE_peak_at_chr7:12971296..12971310,+ | |||
|id=chr7:12971296..12971310,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002178;4.07e-09;3!CL:0002563;6.41e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,3.99e-09,3;CL:0002563,6.51e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006298;5.14e-07;1!UBERON:0003124;5.14e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;4.58e-15;14!DOID:0060085;2.37e-07;1!DOID:3165;2.37e-07;1!DOID:0060121;2.37e-07;1!DOID:2438;2.37e-07;1!DOID:4418;2.37e-07;1!DOID:4960;2.84e-07;1!DOID:0070004;2.84e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,4.53e-15,14;DOID:0060085,2.37e-07,1;DOID:3165,2.37e-07,1;DOID:0060121,2.37e-07,1;DOID:2438,2.37e-07,1;DOID:4418,2.37e-07,1;DOID:4960,2.84e-07,1;DOID:0070004,2.84e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.18e-11;5!UBERON:0010039;1.18e-11;5!UBERON:0001282;4.30e-07;1!UBERON:0009842;4.30e-07;1!UBERON:0003704;4.30e-07;1!UBERON:0001171;4.30e-07;1!UBERON:0001172;4.30e-07;1!UBERON:0001041;4.92e-07;14!UBERON:0001736;5.14e-07;1!UBERON:0001242;6.41e-07;4!UBERON:0001262;6.41e-07;4!UBERON:0004786;6.41e-07;4!UBERON:0004808;6.41e-07;4!UBERON:0001277;6.41e-07;4!UBERON:0002135;7.95e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.91e-07,8;UBERON:0010039,1.91e-07,8;UBERON:0001282,4.57e-07,1;UBERON:0009842,4.57e-07,1;UBERON:0003704,4.57e-07,1;UBERON:0001171,4.57e-07,1;UBERON:0001172,4.57e-07,1;UBERON:0001736,5.14e-07,1;UBERON:0006298,5.14e-07,1;UBERON:0001242,6.51e-07,4;UBERON:0001262,6.51e-07,4;UBERON:0004786,6.51e-07,4;UBERON:0004808,6.51e-07,4;UBERON:0001277,6.51e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,1.73608696572681,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0.587237189370939,1.52909291250092,0,0,0,4.13090517239049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0.175669571386252,1.37528029272598,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.404132016209064,0,0,0,0,0,0,0,0,0.323745888736263,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646584227275248,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.5229767450449,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.9731434987223,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.9273691048295,0,0,0,0,0,0,0,0,0.413509717453592,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,3.98063385144732,1.75380354101505,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,1.50630081242847,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.252791353528,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0.369254416383208,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,3.41826167541004,5.53353370531344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9623685720729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.442306057399416,0,0,0,0,0,0,0,4.57626420943358,0,0,0,0,0,0,0,0,0,0,0,0,18.480458888378,0.189932387867636,0,0,0,21.7792474444522,39.1925934659168,62.53698150659,12.1832448481995,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0,0.717873024576814,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0.314408610199332,0,0,30.4321913122834,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3271331898126,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,2.92717821536708,0,0,0,0.131545547125698,0,0,0,0,0,0,2.15927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.2123538711879,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,22.1049129289916,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,2.75237570042724,0,0,0,0,0,0,0,0,0,0,17.6110916405897,0,0,0,0.250707539292375,1.36401656792831,3.48353369203032,0,0,0,0.952257725854961,0,0,0,0.25458863311266,0.202117188958219,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0,1.73608696572681,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0.587237189370939,1.52909291250092,0,0,0,4.13090517239049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0.175669571386252,1.37528029272598,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.404132016209064,0,0,0,0,0,0,0,0,0.323745888736263,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646584227275248,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.5229767450449,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.9731434987223,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.9273691048295,0,0,0,0,0,0,0,0,0.413509717453592,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,3.98063385144732,1.75380354101505,0,0,0,0,0,0,0.196498082026242,0,0,0,0,0,0,0,0,0,1.50630081242847,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.252791353528,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0.369254416383208,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,3.41826167541004,5.53353370531344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9623685720729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.442306057399416,0,0,0,0,0,0,0,4.57626420943358,0,0,0,0,0,0,0,0,0,0,0,0,18.480458888378,0.189932387867636,0,0,0,21.7792474444522,39.1925934659168,62.53698150659,12.1832448481995,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,0,0.717873024576814,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0,0,0,0,0,0.314408610199332,0,0,30.4321913122834,0,0,0,0,0,0,0.628216385000937,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3271331898126,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0.19024743058172,0,0,0,0,0,0,0,0,0,2.92717821536708,0,0,0,0.131545547125698,0,0,0,0,0,0,2.15927591218621,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.2123538711879,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,22.1049129289916,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,2.75237570042724,0,0,0,0,0,0,0,0,0,0,17.6110916405897,0,0,0,0.250707539292375,1.36401656792831,3.48353369203032,0,0,0,0.952257725854961,0,0,0,0.25458863311266,0.202117188958219,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:12971296..12971310,+ | |||
}} | }} |
Latest revision as of 05:56, 31 July 2015
Short description: | p@chr7:12971296..12971310, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:12971296..12971310, + |
Coexpression cluster: | C1985_gastric_signet_lymphangiectasia_Prostate_smallcell_Intestinal_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 3.99e-09 | 3 |
intestinal epithelial cell | 6.51e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
stomach | 1.91e-07 | 8 |
food storage organ | 1.91e-07 | 8 |
intralobular bile duct | 4.57e-07 | 1 |
acinus | 4.57e-07 | 1 |
intrahepatic bile duct | 4.57e-07 | 1 |
portal lobule | 4.57e-07 | 1 |
hepatic acinus | 4.57e-07 | 1 |
submandibular gland | 5.14e-07 | 1 |
submandibular gland primordium | 5.14e-07 | 1 |
intestinal mucosa | 6.51e-07 | 4 |
wall of intestine | 6.51e-07 | 4 |
gastrointestinal system mucosa | 6.51e-07 | 4 |
gastrointestinal system epithelium | 6.51e-07 | 4 |
intestinal epithelium | 6.51e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 4.53e-15 | 14 |
organ system benign neoplasm | 2.37e-07 | 1 |
skin benign neoplasm | 2.37e-07 | 1 |
integumentary system benign neoplasm | 2.37e-07 | 1 |
dermis tumor | 2.37e-07 | 1 |
cutaneous fibrous histiocytoma | 2.37e-07 | 1 |
bone marrow cancer | 2.84e-07 | 1 |
myeloma | 2.84e-07 | 1 |