FFCP PHASE1:Hg19::chr7:150945740..150945750,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:150945740..150945750,- to FFCP PHASE1:Hg19::chr7:150945740..150945750,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6604 | |EntrezGene=6604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11108 | |HGNC=11108 | ||
|TSSclassifier=strong | |||
|UniProt=Q6STE5 | |UniProt=Q6STE5 | ||
|association_with_transcript=0bp_to_NM_001003801,uc003wjs.2,uc010lqa.1,uc011kvh.1_5end | |||
|cluster_id=chr7:150945740..150945750,- | |||
|description=CAGE_peak_7_at_SMARCD3_5end | |||
|id=chr7:150945740..150945750,- | |||
|ontology_enrichment_celltype=CL:0000055!3.15e-15!180;CL:0000057!3.89e-09!75;CL:0000133!2.75e-07!59 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.16e-14!365;UBERON:0002346!6.40e-14!90;UBERON:0000924!3.56e-13!173;UBERON:0006601!3.56e-13!173;UBERON:0005743!2.13e-12!86;UBERON:0003075!3.62e-12!86;UBERON:0007284!3.62e-12!86;UBERON:0000481!4.34e-12!347;UBERON:0000073!4.71e-12!94;UBERON:0001016!4.71e-12!94;UBERON:0004121!9.75e-12!169;UBERON:0001017!2.15e-11!82;UBERON:0000119!2.25e-11!312;UBERON:0000033!6.25e-11!123;UBERON:0000483!7.65e-11!309;UBERON:0000153!1.07e-10!129;UBERON:0007811!1.07e-10!129;UBERON:0001049!1.76e-10!57;UBERON:0005068!1.76e-10!57;UBERON:0006241!1.76e-10!57;UBERON:0007135!1.76e-10!57;UBERON:0002616!1.18e-09!59;UBERON:0003056!1.34e-09!61;UBERON:0000955!1.86e-09!69;UBERON:0006238!1.86e-09!69;UBERON:0000468!8.48e-09!659;UBERON:0002020!2.80e-08!34;UBERON:0003528!2.80e-08!34;UBERON:0000914!3.83e-08!83;UBERON:0002329!3.83e-08!83;UBERON:0003077!3.83e-08!83;UBERON:0003059!3.83e-08!83;UBERON:0007282!3.83e-08!83;UBERON:0009618!3.83e-08!83;UBERON:0007285!3.83e-08!83;UBERON:0002791!7.81e-08!33;UBERON:0000477!2.27e-07!286;UBERON:0002780!2.30e-07!41;UBERON:0001890!2.30e-07!41;UBERON:0006240!2.30e-07!41;UBERON:0001893!2.32e-07!34;UBERON:0003080!5.67e-07!42;UBERON:0001869!7.26e-07!32;UBERON:0000956!7.35e-07!25;UBERON:0000203!7.35e-07!25;UBERON:0000025!9.02e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;1.09e-08;2!UBERON:0001630;1.09e-08;2!UBERON:0000922;1.10e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,9.40e-09,2;UBERON:0001630,9.40e-09,2 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.492484232307152,1.42800483870977,0.626909442956176,0.85870796139317,0.410623275218653,1.00434111675842,0,0,0,0,0,0.464448369948228,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0.579386075843295,0,0,0.189069634328136,0.221729397462564,0.614843499851882,0.327447688744282,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0.529636723252875,1.72101972449288,1.41867352879343,0.560677600142307,0,0.24666754841716,0,0.404132016209064,0.326923806226917,0.605429710579726,0,0.937285727335186,0,0,0.597794722207204,0.469737994575059,0.161872944368132,0.280901613404497,0,0.61417158655884,0.206651562351531,0,0.247266929278557,0,1.43723628363248,0.168336113954066,0.250237039743928,0.277064115484183,1.31693286264251,0.30648779579902,0.150238058906597,0.113432183160021,1.4351170855109,0,0.423863802319124,1.20036438433761,0.515262646192195,2.06112432036503,0,0.506328996723799,0.194874010322397,0.504867548488229,0.184099797284599,0.323292113637624,2.13005755509969,0.403008392910561,0.169560592310488,0,0.272746120590835,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0.643240938192885,1.38134921352481,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,1.40241773803446,0.4115740113314,2.94017422771084,0,0,0,0,0,0.514703430895577,0,0,0,0,0.325808305310325,0,1.44331342025273,1.15930404975077,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0.616964956219941,0,0.857479297891735,0.112131084345361,1.30788020649984,0.07333828582095,0.258543431515556,0,0,0.531876233169741,0,0.257207374262142,0,0.532844358032199,0.285955987316295,0,0.823240336780769,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0,0.537182889719687,0,0,0,0,0.254094624222463,1.30139853857622,1.54657762555539,0.502548796003046,1.91381625495949,0,0,0,0.36807447515742,0,0.542530047399471,0.207970861530807,0.356857977594324,0.157702415033935,0.585707074963566,0,2.27407504055985,0,0,0.921845842708516,0.347534457872331,0.979005787313703,0.686286847621712,0,0,0,0,0,0,0,0.306923946576125,0.841980283299221,0.384417447767103,0,0.482561763430822,1.48418066444991,0,0.177561725313127,0.164254312027618,0,0.697262270759755,0,0,0,0.229628896329213,0.364182336013434,0.262248829918848,0,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0,0,0.447749509444357,0,0,0.769350375349168,0.984043937099117,0,0.103041011647722,0.0915694648183434,0.330037999682352,0,0,0,0.676695028044854,0.924291702687866,0.15350367472613,0.413509717453592,0.429680979473094,0.290033387828457,0,0.445160178233687,0,0,0.255225424989168,0.30347334256665,0.464845549297286,1.88887408098384,0.6970372701606,0,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0.762520775695299,0.255897791311334,0,0,0,0.359744915166629,0.823611089208164,0.706874414074119,0.202182481573316,0,0,0.975267478179181,0.243713489631284,1.05650146756755,0,0.424216295861138,0,0,0,0.438450885253763,0,0.655894752046633,0.405820753925408,0.6196469961995,0,0.860468113224309,1.08073945114433,0,0,0.422215270595328,0,0.75894634753143,1.39973888097993,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0.284136146806413,0.23874448473769,0.296964680832639,0.307160702099232,0.994147647766298,0.703347082052564,0.111308705022906,0,2.32237948940793,2.39097585901284,0,0,0.409074730008619,0,0.311039587661807,0.0898683511473268,0,0,0.295930216910801,0,0,0,0.278304294485554,0,0,0.437299999980979,0,0.227586896570999,0,0,0,0,0.347249989866585,0,0.482385754501632,0,0.552896299656123,0.591095237907095,0,0,0.278847488557207,0.230850775511391,0.341826167541004,0.46112780877612,0,0,0,0.366390373607449,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.134802265961354,1.60515529459758,0.234264445725339,0,0,0,0,1.20990716048664,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0.290967049465258,0.176512253383001,0.451961481561065,0,0,0.0633107959558787,0,0,0.213452994739353,0.19980960958213,0.144090417154106,0,0,0,0.124252535565433,0,0.135904206073614,0.104602846312333,0,0.288950589901519,0,1.23214841002794,0,0,0,0.558564802544508,0.229160424011684,0,0.599037001496973,0.429226048136571,0.446342914883745,1.88113722962834,0.360299883542404,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.262272940674991,0,1.43429871466276,0,0.714695326373367,1.98627591109629,0.5085370753095,0,0,0,0,0,0.851940108927109,0.226624183040251,0,0,0.387848869084652,0.26446520348538,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.3755727921195,0,1.10929051536852,0.0620964029413835,0.138348634936231,0.37494122388632,0.758245587708239,0,0.941063278792687,0,0,1.04478362020812,0.701139929541673,0,0.568209015825267,0.50313580350515,0,0.228840068396924,0.453692771289717,0.310874401165561,0.295710299979268,0.477890301491107,0,0.155262956876259,0,0.53168342911599,0,0.450772826991655,0,0.406870733204662,1.09109195521536,0.214821114084977,0,0.398095888698616,0,0,0.673498977531838,0,0,0,0,0,0.463044948647668,0,0,0,0.438568099157414,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0.622077260032973,0,0.323474434190045,0.629063767423586,0,0.848662649770126,0.637724760305049,2.10690799240304,0,0.318004350653419,0,0,1.05802783107205,0.6124909547064,0.128458450192919,0,0.638535436228605,0.41023272848151,1.51243017733031,0.0691572524642179,0.322951291263702,0,0.196295437002051,0.11796972334774,0,0.115525666150338,0,0,0.397832444232549,1.42899623863589,0.40341013740704,0,0,0,0,0,0.781078098613847,0.206686796501184,0.0634158101939068,2.7348740450911,0,0,0.351742488719241,0.127762427639595,0,0,0,0.227662191351298,0.0887023701626388,0,0.514464028312255,0.0679697329768317,0.131545547125698,0,0,0.078493092850514,0.628462359664008,0,0,0,0.47775168788705,0.714765441766563,0,0.116241425368125,0.869291361512897,0,0,0,0,0,0.118332000730565,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0,0,0,1.29485767437579,0.718639647993729,9.27851545070559,0.971421986118279,0,0,0.356760272332706,0,0,0,0.154348316215889,0,0,1.47088993052343,0,0.196308467114945,1.18818560130834,0.8453114551668,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0.573358332605805,0,0.0679914901909147,2.18175345170189,0,0.743990036333503,0,0.432626562123789,0,0,0.506794004045748,0,0,0,0,0.378893491091197,0,1.65833887891756,0.517164979309476,0.852935927603924,1.42838658878244,0,0,0.224263725161227,0.509177266225319,1.61693751166575,0.217716747896961,2.05339980651169,0,0.143444410785353,1.66330178273007,0,0,0,0.628776414746108,0,0.366724332548599,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0.872338524100369,0,0,0.261185628199839,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.492484232307152,1.42800483870977,0.626909442956176,0.85870796139317,0.410623275218653,1.00434111675842,0,0,0,0,0,0.464448369948228,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0.579386075843295,0,0,0.189069634328136,0.221729397462564,0.614843499851882,0.327447688744282,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0.529636723252875,1.72101972449288,1.41867352879343,0.560677600142307,0,0.24666754841716,0,0.404132016209064,0.326923806226917,0.605429710579726,0,0.937285727335186,0,0,0.597794722207204,0.469737994575059,0.161872944368132,0.280901613404497,0,0.61417158655884,0.206651562351531,0,0.247266929278557,0,1.43723628363248,0.168336113954066,0.250237039743928,0.277064115484183,1.31693286264251,0.30648779579902,0.150238058906597,0.113432183160021,1.4351170855109,0,0.423863802319124,1.20036438433761,0.515262646192195,2.06112432036503,0,0.506328996723799,0.194874010322397,0.504867548488229,0.184099797284599,0.323292113637624,2.13005755509969,0.403008392910561,0.169560592310488,0,0.272746120590835,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0.643240938192885,1.38134921352481,0,0,0.118306800039844,0,0.241011029883482,0,0,0,0.134831308160164,0,0,0,1.40241773803446,0.4115740113314,2.94017422771084,0,0,0,0,0,0.514703430895577,0,0,0,0,0.325808305310325,0,1.44331342025273,1.15930404975077,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0.616964956219941,0,0.857479297891735,0.112131084345361,1.30788020649984,0.07333828582095,0.258543431515556,0,0,0.531876233169741,0,0.257207374262142,0,0.532844358032199,0.285955987316295,0,0.823240336780769,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0.289562613335158,0,0.537182889719687,0,0,0,0,0.254094624222463,1.30139853857622,1.54657762555539,0.502548796003046,1.91381625495949,0,0,0,0.36807447515742,0,0.542530047399471,0.207970861530807,0.356857977594324,0.157702415033935,0.585707074963566,0,2.27407504055985,0,0,0.921845842708516,0.347534457872331,0.979005787313703,0.686286847621712,0,0,0,0,0,0,0,0.306923946576125,0.841980283299221,0.384417447767103,0,0.482561763430822,1.48418066444991,0,0.177561725313127,0.164254312027618,0,0.697262270759755,0,0,0,0.229628896329213,0.364182336013434,0.262248829918848,0,0.15403067420883,0.784349769176855,0,0.105551628892876,0,0,0,1.54227252690289,0,0,0,0,0.447749509444357,0,0,0.769350375349168,0.984043937099117,0,0.103041011647722,0.0915694648183434,0.330037999682352,0,0,0,0.676695028044854,0.924291702687866,0.15350367472613,0.413509717453592,0.429680979473094,0.290033387828457,0,0.445160178233687,0,0,0.255225424989168,0.30347334256665,0.464845549297286,1.88887408098384,0.6970372701606,0,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0.316379424718726,0.762520775695299,0.255897791311334,0,0,0,0.359744915166629,0.823611089208164,0.706874414074119,0.202182481573316,0,0,0.975267478179181,0.243713489631284,1.05650146756755,0,0.424216295861138,0,0,0,0.438450885253763,0,0.655894752046633,0.405820753925408,0.6196469961995,0,0.860468113224309,1.08073945114433,0,0,0.422215270595328,0,0.75894634753143,1.39973888097993,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0.284136146806413,0.23874448473769,0.296964680832639,0.307160702099232,0.994147647766298,0.703347082052564,0.111308705022906,0,2.32237948940793,2.39097585901284,0,0,0.409074730008619,0,0.311039587661807,0.0898683511473268,0,0,0.295930216910801,0,0,0,0.278304294485554,0,0,0.437299999980979,0,0.227586896570999,0,0,0,0,0.347249989866585,0,0.482385754501632,0,0.552896299656123,0.591095237907095,0,0,0.278847488557207,0.230850775511391,0.341826167541004,0.46112780877612,0,0,0,0.366390373607449,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0.134802265961354,1.60515529459758,0.234264445725339,0,0,0,0,1.20990716048664,0.30607276163049,0.252746318513952,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0,0.290967049465258,0.176512253383001,0.451961481561065,0,0,0.0633107959558787,0,0,0.213452994739353,0.19980960958213,0.144090417154106,0,0,0,0.124252535565433,0,0.135904206073614,0.104602846312333,0,0.288950589901519,0,1.23214841002794,0,0,0,0.558564802544508,0.229160424011684,0,0.599037001496973,0.429226048136571,0.446342914883745,1.88113722962834,0.360299883542404,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.262272940674991,0,1.43429871466276,0,0.714695326373367,1.98627591109629,0.5085370753095,0,0,0,0,0,0.851940108927109,0.226624183040251,0,0,0.387848869084652,0.26446520348538,0,0,0.106787412567695,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.3755727921195,0,1.10929051536852,0.0620964029413835,0.138348634936231,0.37494122388632,0.758245587708239,0,0.941063278792687,0,0,1.04478362020812,0.701139929541673,0,0.568209015825267,0.50313580350515,0,0.228840068396924,0.453692771289717,0.310874401165561,0.295710299979268,0.477890301491107,0,0.155262956876259,0,0.53168342911599,0,0.450772826991655,0,0.406870733204662,1.09109195521536,0.214821114084977,0,0.398095888698616,0,0,0.673498977531838,0,0,0,0,0,0.463044948647668,0,0,0,0.438568099157414,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0.622077260032973,0,0.323474434190045,0.629063767423586,0,0.848662649770126,0.637724760305049,2.10690799240304,0,0.318004350653419,0,0,1.05802783107205,0.6124909547064,0.128458450192919,0,0.638535436228605,0.41023272848151,1.51243017733031,0.0691572524642179,0.322951291263702,0,0.196295437002051,0.11796972334774,0,0.115525666150338,0,0,0.397832444232549,1.42899623863589,0.40341013740704,0,0,0,0,0,0.781078098613847,0.206686796501184,0.0634158101939068,2.7348740450911,0,0,0.351742488719241,0.127762427639595,0,0,0,0.227662191351298,0.0887023701626388,0,0.514464028312255,0.0679697329768317,0.131545547125698,0,0,0.078493092850514,0.628462359664008,0,0,0,0.47775168788705,0.714765441766563,0,0.116241425368125,0.869291361512897,0,0,0,0,0,0.118332000730565,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,0,0,0,1.29485767437579,0.718639647993729,9.27851545070559,0.971421986118279,0,0,0.356760272332706,0,0,0,0.154348316215889,0,0,1.47088993052343,0,0.196308467114945,1.18818560130834,0.8453114551668,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0.573358332605805,0,0.0679914901909147,2.18175345170189,0,0.743990036333503,0,0.432626562123789,0,0,0.506794004045748,0,0,0,0,0.378893491091197,0,1.65833887891756,0.517164979309476,0.852935927603924,1.42838658878244,0,0,0.224263725161227,0.509177266225319,1.61693751166575,0.217716747896961,2.05339980651169,0,0.143444410785353,1.66330178273007,0,0,0,0.628776414746108,0,0.366724332548599,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p7@SMARCD3 | |||
}} | }} |
Latest revision as of 06:10, 17 September 2015
Short description: | p7@SMARCD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SMARCD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001003801, uc003wjs.2, uc010lqa.1, uc011kvh.1_5end |
EntrezGene: | SMARCD3 |
HGNC: | 11108 |
UniProt: | Q6STE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle structure | 9.40e-09 | 2 |
muscle organ | 9.40e-09 | 2 |