FFCP PHASE1:Hg19::chr7:45953003..45953022,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:45953003..45953022,- to FFCP PHASE1:Hg19::chr7:45953003..45953022,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3486 | |EntrezGene=3486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5472 | |HGNC=5472 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-327bp_to_S56205_5end | |||
|cluster_id=chr7:45953003..45953022,- | |||
|coexpression_cluster_id=C223 | |||
|description=CAGE_peak_17_at_IGFBP3_5end | |||
|id=chr7:45953003..45953022,- | |||
|ontology_enrichment_celltype=CL:0002620!1.61e-09!23;CL:0000055!4.11e-08!180;CL:0000153!1.91e-07!9;CL:0000447!1.91e-07!9;CL:0000499!2.18e-07!27;CL:0000057!3.19e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000153;2.96e-18;9!CL:0000447;2.96e-18;9!CL:0002620;3.91e-18;23!CL:0000138;3.58e-15;6!CL:0000327;1.76e-13;15!CL:0000499;1.47e-12;28!CL:0000135;5.56e-11;3!CL:0000388;5.56e-11;3!CL:0002579;4.93e-10;3!CL:0002589;1.58e-07;2!CL:0002617;3.08e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.98e-18,9;CL:0000447,1.98e-18,9;CL:0002620,4.91e-18,23;CL:0000057,1.57e-16,76;CL:0000058,3.42e-15,6;CL:0000138,3.42e-15,6;CL:0000327,1.30e-13,15;CL:0000499,1.40e-12,28;CL:0000135,8.94e-11,3;CL:0000388,8.94e-11,3;CL:0002579,7.15e-10,3;CL:0000048,1.47e-08,427;CL:0000723,2.78e-08,433;CL:0000134,3.17e-08,354;CL:0000034,6.32e-08,441;CL:0002320,7.15e-08,361;CL:0002589,1.56e-07,2;CL:0002617,4.84e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!3.46e-07!5;DOID:450!3.46e-07!5;DOID:66!3.46e-07!5;DOID:423!3.46e-07!5;DOID:0080000!3.46e-07!5;DOID:11722!3.46e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:17;1.86e-16;5!DOID:450;1.86e-16;5!DOID:66;1.86e-16;5!DOID:423;1.86e-16;5!DOID:0080000;1.86e-16;5!DOID:11722;1.86e-16;5!DOID:3350;3.08e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:17,2.60e-16,5;DOID:450,2.60e-16,5;DOID:66,2.60e-16,5;DOID:423,2.60e-16,5;DOID:0080000,2.60e-16,5;DOID:11722,2.60e-16,5;DOID:3350,4.54e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.49e-08!14;UBERON:0000158!1.49e-08!14;UBERON:0003124!3.21e-08!7;UBERON:0003688!8.67e-08!6;UBERON:0002358!8.67e-08!6;UBERON:0003684!8.67e-08!6;UBERON:0001178!8.67e-08!6;UBERON:0004457!4.19e-07!12;UBERON:0000042!4.19e-07!12;UBERON:0004923!7.49e-07!57;UBERON:0002097!8.14e-07!40;UBERON:0002199!8.60e-07!45;UBERON:0002416!8.60e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;9.90e-17;9!UBERON:0000042;9.90e-17;9!UBERON:0003688;1.68e-13;6!UBERON:0002358;1.68e-13;6!UBERON:0003684;1.68e-13;6!UBERON:0001178;1.68e-13;6!UBERON:0007846;5.56e-11;3!UBERON:0000043;5.56e-11;3!UBERON:0007845;5.56e-11;3!UBERON:0002097;1.85e-10;41!UBERON:0002199;7.57e-08;46!UBERON:0002416;7.57e-08;46!UBERON:0001529;1.58e-07;2!UBERON:0007204;1.58e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.66e-13,6;UBERON:0002358,2.66e-13,6;UBERON:0003684,2.66e-13,6;UBERON:0001178,2.66e-13,6;UBERON:0002097,1.29e-12,41;UBERON:0004457,2.86e-12,12;UBERON:0000042,2.86e-12,12;UBERON:0002199,6.81e-11,46;UBERON:0002416,6.81e-11,46;UBERON:0007846,8.94e-11,3;UBERON:0000043,8.94e-11,3;UBERON:0007845,8.94e-11,3;UBERON:0001529,1.56e-07,2;UBERON:0007204,1.56e-07,2;UBERON:0002384,2.16e-07,371 | |||
|phase1_expression=1.09007027562334,1.2846031433459,2.11431606143957,3.00219895059391,0.446961094427288,1.74467704820074,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,11.5660528763061,19.5521785147997,16.2228101236123,2.3858578411533,6.8128881842369,0,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0,0.286836620748814,0,1.12135520028461,1.06748995729705,1.2333377420858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4351170855109,3.41691822109708,4.4505699243508,1.20036438433761,1.13357782162283,1.03056216018252,6.70020682793723,0.843881661206331,1.07180705677318,1.7670364197088,4.23429533754577,0.161646056818812,3.55009592516614,1.71278566986988,0.67824236924195,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0.871533458600294,0,0,0,0,0,1.14861935834114,0,2.75084482668401,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0.788512075169673,0.702848489956279,0.300946099727719,2.27407504055985,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0.907170879989041,0.992431231275107,0.460385919864187,1.68396056659844,1.53766979106841,1.02341449813341,1.28683136914886,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0.229628896329213,0,0.524497659837696,0.451199612907412,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0.103041011647722,0,0,0,0,3.21367859688319,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.62962469366128,0,0.308033580176089,0.532306030317022,0.869932992075073,1.48259375283136,2.00374841438788,0,0,0.190630193923825,0,0,0.636406495851874,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0.731140468893853,0,0,0.141405431953713,1.13008116620243,0,3.3171948762061,3.06915619677634,0,0,0.405820753925408,0,0,0,0,0,0,1.89996871767898,1.31717957183961,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,4.05865624054073,1.48482340416319,0.307160702099232,0,0,0,0,0,0,0,0,0,0,14.9299002077668,0.0898683511473268,0.358042349351218,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0.254253650292766,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0.139423744278603,0.0769502585037971,0,0,0,0,4.78501739597879,0.457987967009312,3.73124343213044,0,0,0,0,0,0,0,0,0,0.652931232636591,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0.693373365065693,0.520679215005393,0.0979923974143777,0.0870592065804026,0,1.0319161948297,0,0,0,0,0,0.677942222341597,0,0,0,0,0.0801588202515337,0,4.79543062997113,0.144090417154106,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44119953416961,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0.717149357331379,0,0,0,0.76280561296425,0,0.864221491201268,0,0,0,0.170388021785422,0,0,0,0,0,0,0.704815022316672,0.213574825135389,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570930667089935,0.235265819698172,0,0,0,0.467426619694449,0.554805861502613,0.568209015825267,0.50313580350515,1.77962244319307,0,0.604923695052956,0.466311601748341,0.147855149989634,0,0,0,0,0,0.521745061811734,0.150257608997218,1.52322084867518,0.406870733204662,0,0,0,1.99047944349308,0,0.343395705182793,0.336749488765919,1.26184898228651,0,0,0,0.680117776536817,0,0,0.895444205407437,0.308801447160972,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0.346576998451015,0,0,0,0,0.40341013740704,0,0,0.49131575253029,0.295712172434091,0,0,0,0,0,0,0,0,1.40538670403555,0,0,0,0,0.443511850813194,0,0,0,0,0,0,0,0,0,0,2.80705868584208,15.2880540123856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223710863595585,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,2.20905249094162,0,0.0644578879735772,0,1.60698544745092,0,0.320965466756673,0,0,0,0,0,0,0,1.11598505450025,6.00828317220844,3.02838593486652,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0.0636471582781649,0.202117188958219,0,0,0,0.0717222053926763,0.99798106963804,0.162806537221949,0.213454691755431,0,0.449126010532934,0,0,0,0,0.201273793591026,0 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| ||
|short_description=p17@IGFBP3 | |||
}} | }} |
Latest revision as of 19:32, 18 September 2015
Short description: | p17@IGFBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_IGFBP3_5end |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | -327bp_to_S56205_5end |
EntrezGene: | IGFBP3 |
HGNC: | 5472 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.98e-18 | 9 |
carbohydrate secreting cell | 1.98e-18 | 9 |
skin fibroblast | 4.91e-18 | 23 |
fibroblast | 1.57e-16 | 76 |
chondroblast | 3.42e-15 | 6 |
chondrocyte | 3.42e-15 | 6 |
extracellular matrix secreting cell | 1.30e-13 | 15 |
stromal cell | 1.40e-12 | 28 |
fibrocyte | 8.94e-11 | 3 |
tendon cell | 8.94e-11 | 3 |
omentum preadipocyte | 7.15e-10 | 3 |
multi fate stem cell | 1.47e-08 | 427 |
somatic stem cell | 2.78e-08 | 433 |
mesenchymal cell | 3.17e-08 | 354 |
stem cell | 6.32e-08 | 441 |
connective tissue cell | 7.15e-08 | 361 |
smooth muscle cell of the brachiocephalic vasculature | 1.56e-07 | 2 |
adipocyte of breast | 4.84e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.66e-13 | 6 |
peritoneum | 2.66e-13 | 6 |
abdominal cavity | 2.66e-13 | 6 |
visceral peritoneum | 2.66e-13 | 6 |
skin of body | 1.29e-12 | 41 |
cavity lining | 2.86e-12 | 12 |
serous membrane | 2.86e-12 | 12 |
integument | 6.81e-11 | 46 |
integumental system | 6.81e-11 | 46 |
dense regular connective tissue | 8.94e-11 | 3 |
tendon | 8.94e-11 | 3 |
regular connective tissue | 8.94e-11 | 3 |
brachiocephalic artery | 1.56e-07 | 2 |
brachiocephalic vasculature | 1.56e-07 | 2 |
connective tissue | 2.16e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.60e-16 | 5 |
myotonic disease | 2.60e-16 | 5 |
muscle tissue disease | 2.60e-16 | 5 |
myopathy | 2.60e-16 | 5 |
muscular disease | 2.60e-16 | 5 |
myotonic dystrophy | 2.60e-16 | 5 |
mesenchymal cell neoplasm | 4.54e-07 | 2 |