FFCP PHASE1:Hg19::chr9:133822857..133822869,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:133822857..133822869,- | |||
|coexpression_cluster_id=C164 | |||
|description=CAGE_peak_at_chr9:133822857..133822869,- | |||
|id=chr9:133822857..133822869,- | |||
|ontology_enrichment_celltype=CL:0000066!5.56e-17!254;CL:0002076!5.26e-14!43;CL:0002178!1.50e-13!3;CL:0000223!7.71e-13!59;CL:0002251!6.10e-12!21;CL:0000076!8.51e-09!62 | |||
|ontology_enrichment_celltype_v019=CL:0002251;7.40e-12;20!CL:0002178;1.01e-09;3!CL:0000307;1.53e-09;3!CL:0002076;6.95e-08;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002251,6.87e-12,20;CL:0002076,6.90e-10,42;CL:0002178,1.01e-09,3;CL:0000068,1.67e-09,3;CL:0000069,1.67e-09,3;CL:0000307,1.67e-09,3;CL:0000377,1.67e-09,3;CL:0000223,2.90e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000377;1.53e-09;3 | |||
|ontology_enrichment_disease=DOID:1749!9.45e-35!14;DOID:305!1.39e-33!106;DOID:0050687!1.07e-24!143;DOID:162!3.46e-14!235;DOID:14566!9.93e-14!239;DOID:3119!1.68e-07!14;DOID:1324!8.38e-07!15 | |||
|ontology_enrichment_disease_v019=DOID:3111;7.62e-26;1!DOID:3603;7.62e-26;1!DOID:3493;6.43e-14;2!DOID:4556;1.53e-09;3!DOID:3119;3.76e-08;14!DOID:1749;5.18e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,1.26e-25,1;DOID:3603,1.26e-25,1;DOID:3493,6.43e-14,2;DOID:4556,1.41e-09,3;DOID:305,1.62e-08,106;DOID:3119,3.76e-08,14;DOID:1749,4.66e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0003343!1.82e-17!4;UBERON:0004785!1.82e-17!4;UBERON:0002394!1.31e-16!4;UBERON:0003928!1.31e-16!4;UBERON:0003729!5.36e-14!5;UBERON:0000344!2.94e-12!12;UBERON:0004119!1.51e-10!169;UBERON:0000925!1.51e-10!169;UBERON:0006595!1.51e-10!169;UBERON:0000369!2.17e-10!4;UBERON:0002435!2.17e-10!4;UBERON:0000204!2.17e-10!4;UBERON:0010082!2.17e-10!4;UBERON:0001873!4.46e-10!2;UBERON:0010122!4.46e-10!2;UBERON:0001007!8.52e-10!155;UBERON:0001555!8.52e-10!155;UBERON:0007026!8.52e-10!155;UBERON:0002294!1.52e-09!7;UBERON:0001173!1.52e-09!7;UBERON:0004912!1.52e-09!7;UBERON:0001041!1.93e-08!98;UBERON:0001004!2.03e-08!72;UBERON:0004921!3.64e-08!129;UBERON:0004185!3.64e-08!129;UBERON:0002420!9.51e-08!9;UBERON:0007245!9.51e-08!9;UBERON:0010009!9.51e-08!9;UBERON:0010011!9.51e-08!9;UBERON:0000454!9.51e-08!9;UBERON:0000065!1.95e-07!53;UBERON:0000077!3.76e-07!130;UBERON:0000974!5.03e-07!10;UBERON:0005383!5.64e-07!3;UBERON:0005382!5.64e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0006562;1.21e-13;2!UBERON:0003343;1.80e-07;4!UBERON:0004785;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,1.59e-07,4;UBERON:0004785,1.59e-07,4 | |||
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| ||
|short_description=p@chr9:133822857..133822869,- | |||
}} | }} |
Latest revision as of 23:37, 31 July 2015
Short description: | p@chr9:133822857..133822869, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:133822857..133822869, - |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of alimentary canal | 6.87e-12 | 20 |
endo-epithelial cell | 6.90e-10 | 42 |
epithelial cell of stomach | 1.01e-09 | 3 |
duct epithelial cell | 1.67e-09 | 3 |
branched duct epithelial cell | 1.67e-09 | 3 |
tracheal epithelial cell | 1.67e-09 | 3 |
tracheoblast | 1.67e-09 | 3 |
endodermal cell | 2.90e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 1.59e-07 | 4 |
respiratory system mucosa | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.26e-25 | 1 |
mucinous cystadenocarcinoma | 1.26e-25 | 1 |
signet ring cell adenocarcinoma | 6.43e-14 | 2 |
lung large cell carcinoma | 1.41e-09 | 3 |
carcinoma | 1.62e-08 | 106 |
gastrointestinal system cancer | 3.76e-08 | 14 |
squamous cell carcinoma | 4.66e-08 | 14 |