FFCP PHASE1:Mm9::chr11:120319407..120319461,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:120319407..120319461,+ to FFCP PHASE1:Mm9::chr11:120319407..120319461,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67291 | |EntrezGene=67291 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=155 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R0K4 | |UniProt=Q8R0K4 | ||
|association_with_transcript=0bp_to_ENSMUST00000058370,ENSMUST00000140308,ENSMUST00000150400,NM_152807,uc007msu.1_5end | |||
|cluster_id=chr11:120319407..120319461,+ | |||
|description=CAGE_peak_1_at_Ccdc137_5end | |||
|id=chr11:120319407..120319461,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!7.21e-12!94;UBERON:0007811!1.34e-10!86;UBERON:0004177!5.13e-09!29;UBERON:0002370!1.24e-08!23;UBERON:0000974!1.24e-08!23;UBERON:0004807!1.24e-08!23;UBERON:0005058!1.24e-08!23;UBERON:0003351!1.24e-08!23;UBERON:0009113!1.24e-08!23;UBERON:0003295!1.24e-08!23;UBERON:0009722!1.24e-08!23;UBERON:0005562!1.24e-08!23;UBERON:0007690!1.24e-08!23;UBERON:0003408!6.51e-08!24;UBERON:0006562!1.20e-07!24;UBERON:0001557!1.20e-07!24;UBERON:0001042!1.20e-07!24;UBERON:0008814!1.20e-07!24;UBERON:0009145!1.20e-07!24;UBERON:0000475!2.43e-07!200;UBERON:0000477!5.13e-07!154;UBERON:0000065!5.57e-07!41;UBERON:0000072!7.12e-07!27;UBERON:0002390!8.28e-07!45;UBERON:0003061!8.28e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.13e-09,29;UBERON:0005057,5.13e-09,29;UBERON:0002370,1.24e-08,23;UBERON:0000974,1.24e-08,23;UBERON:0004807,1.24e-08,23;UBERON:0005058,1.24e-08,23;UBERON:0003351,1.24e-08,23;UBERON:0009113,1.24e-08,23;UBERON:0003295,1.24e-08,23;UBERON:0009722,1.24e-08,23;UBERON:0005562,1.24e-08,23;UBERON:0007690,1.24e-08,23;UBERON:0003408,6.51e-08,24;UBERON:0006562,1.20e-07,24;UBERON:0001557,1.20e-07,24;UBERON:0001042,1.20e-07,24;UBERON:0008814,1.20e-07,24;UBERON:0009145,1.20e-07,24;UBERON:0000077,2.10e-07,35;UBERON:0000065,5.57e-07,41;UBERON:0000072,7.12e-07,27;UBERON:0002390,8.28e-07,45;UBERON:0003061,8.28e-07,45 | |||
|phase1_expression=16.4953312517938,9.07336059862339,5.91499011206397,11.4936400296595,11.0197060588196,17.1236857350128,15.4184342793047,18.7228818990286,53.640503139785,55.4732927383125,64.2067380845644,64.6154487862225,23.7969014604376,19.5821701418554,19.3203661853084,27.3341610976265,18.1886088313318,23.1864691538305,23.9950258810043,27.1609377150739,14.5424026158329,14.0993150705257,19.5899841854202,8.31960598525715,8.71755268055246,6.89078356938024,9.47676391549965,9.69620547086501,9.69119439227507,11.089325709437,11.3082560434205,37.4668097341182,30.1381745916439,15.8481681015439,32.640233031894,21.278034605887,31.8504195769296,3.76678467663217,7.813353445238,6.28228492768558,3.52938892818609,1.36609096991689,2.91306211818692,22.9132208715551,24.431840423903,20.74078299427,15.6478268869608,14.3896603211095,17.1355222532888,21.1928589990969,10.6389680435276,17.2503077237966,17.9527388481778,11.6057942721815,13.4437519656986,9.00408026125814,9.74213695791773,10.8291139378263,12.3413041124355,6.87688273053643,7.60597684207415,14.5703148789727,16.8966011261116,10.7987966073768,9.88866362566974,9.2362414942993,14.081205194365,19.2109152660777,14.3091664985699,17.5507719831198,17.6672967535161,13.7112472513826,16.565140571371,12.9840247167851,17.2521847832825,17.4651569455904,14.3150645299205,11.6195477657521,14.8998337258556,12.3973110466382,14.3635600455783,17.7110545989298,20.6595419261022,15.1945904708554,10.8486755921535,10.0173719061047,13.0981946335175,12.3023634244698,33.5467036466005,11.3357340160178,18.5513272769074,11.185510400758,16.319312008986,11.3337670243942,12.9955283489534,15.6809410484067,11.5164424508037,10.2258193546835,9.35229616570328,8.83348936275851,16.4786801138716,16.6824420638613,25.4805239706646,14.2213340630666,11.6905162146056,17.4818307177818,14.1546844604139,12.5602267690966,23.0454716445983,14.5473296283528,15.6136794089522,14.9188084372949,14.2981608298756,12.2085338847624,10.4653949350777,15.9596570988688,6.42706916109372,15.4721311904305,14.153768831198,13.9119490954772,13.2504911076236,16.0008833534623,3.72783522436244,18.4451902117275,15.0801628905688,9.19645398750929,12.1013275750979,11.9980546198682,14.3589356592563,18.574039286198,23.33253074375,15.2041766056566,17.0347833788431,12.7857728665165,21.6099566341943,15.2506787283692,11.915205570487,11.3210343255185,18.1960386072246,14.3100462002802,15.354212269599,17.012755728077,14.5850325142333,15.3718914192429,11.7022778540284,15.1174189936123,13.0245397138023,11.6416516832557,17.2454394346274,16.8304411349359,17.4191612922309,17.0972671293508,18.9072129473407,14.626590993931,14.404749548556,18.9082553477569,12.6398373716382,15.1835265197682,9.94572247884574,12.2204205795946,15.2441938987713,17.1058958387964,13.7311946639422,16.3314312350345,18.5120535464854,13.7195027402741,14.2184902741798,8.29033930806903,13.1647879930784,11.6558899496158,9.56611952641098,10.3801991071986,11.8557062257167,6.44190810049784,18.0849355765149,13.377599609307,7.59963200862735,14.5447811664949,17.9162130449597,17.4177503895329,16.2373001265838,14.5212137728807,13.1203045868473,14.2669219584419,12.3377556001573,8.72904460037258,10.304743560811,6.36660710531683,10.5280607044325,11.6846523125049,13.6166971421057,9.95706366271836,18.9667900953082,19.5364956562636,13.5249282807697,16.6994088833158,17.8436288194216,11.1515953625607,16.3150265780584,17.2703873136135,15.2288766006134,10.8589504251184,16.8977997439675,18.0192714173382,21.0318124771127,17.7641068784034,18.4602710463538,13.7470981058878,13.4951701444152,13.8094145976389,6.80967952455149,10.7078951143352,7.18841032636773,7.44281895337007,17.4741096944154,14.3969960429854,11.4814344654024,8.20153986317724,16.4430339248278,20.6545638829828,18.578007314391,19.5206848641466,15.2548661387526,13.7355131102289,12.8543566078447,12.8788207586147,17.0245955634686,14.6166695168191,17.8589340896386,17.0417847304368,16.0597033135283,15.3328002096402,6.03165135757089,6.52686820582452,7.86822836830458,13.5209005689319,18.1422166686205,15.589154316763,12.7869257393807,7.32165688892682,14.1978698737316,15.2271110275689,11.2020166821055,12.9043150894378,14.4819138153556,16.1353622549635,17.4068601720205,9.9366991689846,8.69633111482352,16.3873871375122,14.3359486060351,22.0801348547396,12.3794089108718,24.5805483229078,11.9470624505967,14.5668381692989,16.9301191900261,15.4656165399836,17.4228116799656,13.5271465095328,12.4045580720746,9.81541069589265,10.6949213515416,16.7499481705982,16.8669773719998,18.5643977846736,25.1925308257803,19.6266592494128,19.1450851998477,17.361299837559,14.0098784577396,17.8368817602071,20.8977256164694,14.6143175575008,8.91752490642099,11.0152676849186,16.7601582521771,17.9726015706213,12.4327608555847,14.71635368247,12.2953514323231,16.5782308742512,12.5336759750836,14.4631735568198,16.7453463181896,15.6854019652049,19.0750363190803,17.3298980444316,18.4537207423384,14.4130249120109,10.538662659619,15.534611207926,10.0885980877229,17.184071124272,17.8729836373341,13.0124458961183,16.6328224865574,14.0089158329694,12.2283035697859,13.3515702920973,9.25718704123762,9.6849698534091,7.12882353104861,11.8054469486516,5.6369293868419,16.1477869727497,19.3586433834804,17.5006069509643,15.8866582877609,15.5439635451516,13.6134396829075,17.4473875690893,13.5268554309167,13.2871266454303,11.2331702440568,18.6446561170625,16.8261928690836,19.4123709041524,21.1770941453806,19.5139098277555,15.2984643181574,15.505212988076,21.7103604946629,21.6068202889036,17.146531497375,19.0561489908629,20.7585285975673,17.3181314952593,19.9859502730483,9.06921534460846,24.8624267778952,38.846099911903,27.7009617000729,14.2960299583821,13.5131382324851,19.7803754208646,15.0057865355346,9.5298699766719,23.1548255472997,17.9526842237799,21.7700295106971,23.3720327987415,16.4419804744954,14.3524840504043,19.5756525067224,17.1122057225204,17.2194115413998,21.2281727818246,18.1627858272309,14.3648954424371,16.3904261523969,14.5864030240976,15.0921477092147,13.420576116851,14.2237905793034,13.1862436632892,17.0087181083662,15.4145299175916,15.7157165931949,11.3175804831646,16.1999807922897,14.7898102055248,13.8993834872584,22.8620971815875,15.5284996766106,16.0114652984875,16.8955219329356,15.8974833745149,14.7433778525729,15.795346748181,19.313331385733,15.9881058295561,14.4928445839609,16.4998485388769,17.3781574229134,19.2040889349625,16.5681018891951,9.53941861818155,14.9480122836459,16.3517440743435,19.2338590289754,18.127610418758,10.6098636039628,11.4912865851455,11.2287172053796,9.23945532407683,4.78220830172108,7.72069966918304,12.2889952878823 | |phase1_expression=16.4953312517938,9.07336059862339,5.91499011206397,11.4936400296595,11.0197060588196,17.1236857350128,15.4184342793047,18.7228818990286,53.640503139785,55.4732927383125,64.2067380845644,64.6154487862225,23.7969014604376,19.5821701418554,19.3203661853084,27.3341610976265,18.1886088313318,23.1864691538305,23.9950258810043,27.1609377150739,14.5424026158329,14.0993150705257,19.5899841854202,8.31960598525715,8.71755268055246,6.89078356938024,9.47676391549965,9.69620547086501,9.69119439227507,11.089325709437,11.3082560434205,37.4668097341182,30.1381745916439,15.8481681015439,32.640233031894,21.278034605887,31.8504195769296,3.76678467663217,7.813353445238,6.28228492768558,3.52938892818609,1.36609096991689,2.91306211818692,22.9132208715551,24.431840423903,20.74078299427,15.6478268869608,14.3896603211095,17.1355222532888,21.1928589990969,10.6389680435276,17.2503077237966,17.9527388481778,11.6057942721815,13.4437519656986,9.00408026125814,9.74213695791773,10.8291139378263,12.3413041124355,6.87688273053643,7.60597684207415,14.5703148789727,16.8966011261116,10.7987966073768,9.88866362566974,9.2362414942993,14.081205194365,19.2109152660777,14.3091664985699,17.5507719831198,17.6672967535161,13.7112472513826,16.565140571371,12.9840247167851,17.2521847832825,17.4651569455904,14.3150645299205,11.6195477657521,14.8998337258556,12.3973110466382,14.3635600455783,17.7110545989298,20.6595419261022,15.1945904708554,10.8486755921535,10.0173719061047,13.0981946335175,12.3023634244698,33.5467036466005,11.3357340160178,18.5513272769074,11.185510400758,16.319312008986,11.3337670243942,12.9955283489534,15.6809410484067,11.5164424508037,10.2258193546835,9.35229616570328,8.83348936275851,16.4786801138716,16.6824420638613,25.4805239706646,14.2213340630666,11.6905162146056,17.4818307177818,14.1546844604139,12.5602267690966,23.0454716445983,14.5473296283528,15.6136794089522,14.9188084372949,14.2981608298756,12.2085338847624,10.4653949350777,15.9596570988688,6.42706916109372,15.4721311904305,14.153768831198,13.9119490954772,13.2504911076236,16.0008833534623,3.72783522436244,18.4451902117275,15.0801628905688,9.19645398750929,12.1013275750979,11.9980546198682,14.3589356592563,18.574039286198,23.33253074375,15.2041766056566,17.0347833788431,12.7857728665165,21.6099566341943,15.2506787283692,11.915205570487,11.3210343255185,18.1960386072246,14.3100462002802,15.354212269599,17.012755728077,14.5850325142333,15.3718914192429,11.7022778540284,15.1174189936123,13.0245397138023,11.6416516832557,17.2454394346274,16.8304411349359,17.4191612922309,17.0972671293508,18.9072129473407,14.626590993931,14.404749548556,18.9082553477569,12.6398373716382,15.1835265197682,9.94572247884574,12.2204205795946,15.2441938987713,17.1058958387964,13.7311946639422,16.3314312350345,18.5120535464854,13.7195027402741,14.2184902741798,8.29033930806903,13.1647879930784,11.6558899496158,9.56611952641098,10.3801991071986,11.8557062257167,6.44190810049784,18.0849355765149,13.377599609307,7.59963200862735,14.5447811664949,17.9162130449597,17.4177503895329,16.2373001265838,14.5212137728807,13.1203045868473,14.2669219584419,12.3377556001573,8.72904460037258,10.304743560811,6.36660710531683,10.5280607044325,11.6846523125049,13.6166971421057,9.95706366271836,18.9667900953082,19.5364956562636,13.5249282807697,16.6994088833158,17.8436288194216,11.1515953625607,16.3150265780584,17.2703873136135,15.2288766006134,10.8589504251184,16.8977997439675,18.0192714173382,21.0318124771127,17.7641068784034,18.4602710463538,13.7470981058878,13.4951701444152,13.8094145976389,6.80967952455149,10.7078951143352,7.18841032636773,7.44281895337007,17.4741096944154,14.3969960429854,11.4814344654024,8.20153986317724,16.4430339248278,20.6545638829828,18.578007314391,19.5206848641466,15.2548661387526,13.7355131102289,12.8543566078447,12.8788207586147,17.0245955634686,14.6166695168191,17.8589340896386,17.0417847304368,16.0597033135283,15.3328002096402,6.03165135757089,6.52686820582452,7.86822836830458,13.5209005689319,18.1422166686205,15.589154316763,12.7869257393807,7.32165688892682,14.1978698737316,15.2271110275689,11.2020166821055,12.9043150894378,14.4819138153556,16.1353622549635,17.4068601720205,9.9366991689846,8.69633111482352,16.3873871375122,14.3359486060351,22.0801348547396,12.3794089108718,24.5805483229078,11.9470624505967,14.5668381692989,16.9301191900261,15.4656165399836,17.4228116799656,13.5271465095328,12.4045580720746,9.81541069589265,10.6949213515416,16.7499481705982,16.8669773719998,18.5643977846736,25.1925308257803,19.6266592494128,19.1450851998477,17.361299837559,14.0098784577396,17.8368817602071,20.8977256164694,14.6143175575008,8.91752490642099,11.0152676849186,16.7601582521771,17.9726015706213,12.4327608555847,14.71635368247,12.2953514323231,16.5782308742512,12.5336759750836,14.4631735568198,16.7453463181896,15.6854019652049,19.0750363190803,17.3298980444316,18.4537207423384,14.4130249120109,10.538662659619,15.534611207926,10.0885980877229,17.184071124272,17.8729836373341,13.0124458961183,16.6328224865574,14.0089158329694,12.2283035697859,13.3515702920973,9.25718704123762,9.6849698534091,7.12882353104861,11.8054469486516,5.6369293868419,16.1477869727497,19.3586433834804,17.5006069509643,15.8866582877609,15.5439635451516,13.6134396829075,17.4473875690893,13.5268554309167,13.2871266454303,11.2331702440568,18.6446561170625,16.8261928690836,19.4123709041524,21.1770941453806,19.5139098277555,15.2984643181574,15.505212988076,21.7103604946629,21.6068202889036,17.146531497375,19.0561489908629,20.7585285975673,17.3181314952593,19.9859502730483,9.06921534460846,24.8624267778952,38.846099911903,27.7009617000729,14.2960299583821,13.5131382324851,19.7803754208646,15.0057865355346,9.5298699766719,23.1548255472997,17.9526842237799,21.7700295106971,23.3720327987415,16.4419804744954,14.3524840504043,19.5756525067224,17.1122057225204,17.2194115413998,21.2281727818246,18.1627858272309,14.3648954424371,16.3904261523969,14.5864030240976,15.0921477092147,13.420576116851,14.2237905793034,13.1862436632892,17.0087181083662,15.4145299175916,15.7157165931949,11.3175804831646,16.1999807922897,14.7898102055248,13.8993834872584,22.8620971815875,15.5284996766106,16.0114652984875,16.8955219329356,15.8974833745149,14.7433778525729,15.795346748181,19.313331385733,15.9881058295561,14.4928445839609,16.4998485388769,17.3781574229134,19.2040889349625,16.5681018891951,9.53941861818155,14.9480122836459,16.3517440743435,19.2338590289754,18.127610418758,10.6098636039628,11.4912865851455,11.2287172053796,9.23945532407683,4.78220830172108,7.72069966918304,12.2889952878823 | ||
|short_description=p1@Ccdc137 | |||
}} | }} |
Latest revision as of 02:52, 27 September 2015
Short description: | p1@Ccdc137 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ccdc137_5end |
Coexpression cluster: | MCL_coexpression_mm9:155 |
Association with transcript: | 0bp_to_ENSMUST00000058370, ENSMUST00000140308, ENSMUST00000150400, NM_152807, uc007msu.1_5end |
EntrezGene: | Ccdc137 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 5.13e-09 | 29 |
immune organ | 5.13e-09 | 29 |
thymus | 1.24e-08 | 23 |
neck | 1.24e-08 | 23 |
respiratory system epithelium | 1.24e-08 | 23 |
hemolymphoid system gland | 1.24e-08 | 23 |
pharyngeal epithelium | 1.24e-08 | 23 |
thymic region | 1.24e-08 | 23 |
pharyngeal gland | 1.24e-08 | 23 |
entire pharyngeal arch endoderm | 1.24e-08 | 23 |
thymus primordium | 1.24e-08 | 23 |
early pharyngeal endoderm | 1.24e-08 | 23 |
gland of gut | 6.51e-08 | 24 |
pharynx | 1.20e-07 | 24 |
upper respiratory tract | 1.20e-07 | 24 |
chordate pharynx | 1.20e-07 | 24 |
pharyngeal arch system | 1.20e-07 | 24 |
pharyngeal region of foregut | 1.20e-07 | 24 |
mixed endoderm/mesoderm-derived structure | 2.10e-07 | 35 |
respiratory tract | 5.57e-07 | 41 |
segment of respiratory tract | 7.12e-07 | 27 |
hematopoietic system | 8.28e-07 | 45 |
blood island | 8.28e-07 | 45 |