FFCP PHASE1:Mm9::chr11:67268841..67268905,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:67268841..67268905,+ to FFCP PHASE1:Mm9::chr11:67268841..67268905,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14457 | |EntrezGene=14457 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=B1ATI9 | |UniProt=B1ATI9 | ||
|association_with_transcript=-33bp_to_ENSMUST00000108681_5end | |||
|cluster_id=chr11:67268841..67268905,+ | |||
|description=CAGE_peak_3_at_Gas7_5end | |||
|id=chr11:67268841..67268905,+ | |||
|ontology_enrichment_celltype=CL:0000393!7.19e-07!39;CL:0000211!7.19e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,6.39e-07,39;CL:0000211,6.39e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!8.67e-17!102;UBERON:0000924!8.67e-17!102;UBERON:0006601!8.67e-17!102;UBERON:0000073!3.59e-14!75;UBERON:0001016!3.59e-14!75;UBERON:0001017!4.10e-13!73;UBERON:0005743!4.10e-13!73;UBERON:0002346!7.12e-13!71;UBERON:0003075!7.12e-13!71;UBERON:0007284!7.12e-13!71;UBERON:0001049!1.58e-12!52;UBERON:0005068!1.58e-12!52;UBERON:0006241!1.58e-12!52;UBERON:0007135!1.58e-12!52;UBERON:0002020!7.84e-12!34;UBERON:0000033!3.20e-10!63;UBERON:0000955!4.83e-10!50;UBERON:0006238!4.83e-10!50;UBERON:0002616!5.00e-10!49;UBERON:0003056!6.96e-10!49;UBERON:0000468!1.20e-09!333;UBERON:0003080!1.48e-09!40;UBERON:0002780!2.56e-09!39;UBERON:0001890!2.56e-09!39;UBERON:0006240!2.56e-09!39;UBERON:0002791!2.62e-09!29;UBERON:0003528!2.62e-09!29;UBERON:0001893!2.62e-09!29;UBERON:0002021!4.76e-08!10;UBERON:0000411!4.76e-08!10;UBERON:0001950!4.76e-08!10;UBERON:0000025!6.78e-08!114;UBERON:0004111!7.37e-08!122;UBERON:0000922!6.21e-07!328;UBERON:0000956!8.20e-07!21;UBERON:0001869!8.20e-07!21;UBERON:0000203!8.20e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.11e-16,95;UBERON:0000924,1.11e-16,95;UBERON:0006601,1.11e-16,95;UBERON:0001016,3.96e-14,75;UBERON:0010371,1.43e-13,73;UBERON:0001017,4.57e-13,73;UBERON:0002346,6.02e-13,64;UBERON:0003075,6.02e-13,64;UBERON:0007284,6.02e-13,64;UBERON:0001049,1.86e-12,52;UBERON:0005068,1.86e-12,52;UBERON:0006241,1.86e-12,52;UBERON:0007135,1.86e-12,52;UBERON:0000073,2.40e-12,54;UBERON:0002020,7.05e-12,34;UBERON:0010314,1.00e-10,92;UBERON:0003056,6.35e-10,49;UBERON:0000955,1.22e-09,47;UBERON:0006238,1.22e-09,47;UBERON:0002616,1.26e-09,46;UBERON:0003080,1.37e-09,40;UBERON:0002780,2.38e-09,39;UBERON:0001890,2.38e-09,39;UBERON:0006240,2.38e-09,39;UBERON:0003528,2.47e-09,29;UBERON:0002791,2.47e-09,29;UBERON:0001893,2.47e-09,29;UBERON:0002021,4.12e-08,10;UBERON:0000411,4.12e-08,10;UBERON:0001950,4.12e-08,10;UBERON:0000025,9.04e-08,114;UBERON:0004111,1.11e-07,122;UBERON:0000956,8.14e-07,21;UBERON:0001869,8.14e-07,21;UBERON:0000203,8.14e-07,21 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,1.26184866143295,0.822686601634433,0.42438965179803,3.57181818634493,0.496454756004426,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2191658874356,13.584508783415,3.85448179539531,3.12956537739216,0.65407546914134,0.219686182734472,1.36100929351998,11.4788865732797,5.75010257459886,0,0,1.34437519656986,18.7799388306241,11.4613375975503,7.21940929188419,3.43937983461316,2.64495489636016,3.1691570175309,19.6529828600097,20.4537803105562,2.6996991518442,2.96659908770092,1.4209602298922,4.19440154725767,3.45796474789399,6.73982480005105,8.6403800532282,5.25812403378455,15.996455126613,15.6816664075646,2.69479758272899,2.58782771749238,3.67687514644008,5.50579404996943,6.38436690425939,3.99376986466233,10.5509030184155,11.8933936683133,5.73004707612436,4.18774498502071,7.87867654044352,8.40390362772456,13.8475435172624,13.0981946335175,8.01517617048792,14.0093457666391,18.5906037862692,17.6817338108023,2.58127163094416,0,0.539703191637817,0,0,1.82577746171277,0,0,0,2.67602497575693,0,0,0,0.865964164044856,0.506719730950197,2.02209778005913,1.82694207550496,5.95557132388495,3.71105347662062,3.29622120855658,5.78484408793068,4.38169444786511,2.71300752994721,5.29149182110672,3.89566433121994,12.1125534189843,3.61498392299779,3.5384422077995,6.79420769779119,1.76673214768315,2.90925151881133,0,4.9772735491963,5.65506108396329,2.55457055208591,0.479260498023681,0.599902730993408,1.14363204365758,6.44099749440738,13.2675174817402,8.16753288733619,15.2965401769203,19.6900902144355,4.57133698031032,13.7905073607594,11.2023300235348,1.49288364732112,1.26361379216837,3.57751155007006,1.82168620147785,2.75882525320168,4.14142898552303,6.48030716693575,7.00775941258677,5.12454881139399,5.80950692270319,7.76110112217047,0.215567992932842,0.567318240503458,1.58356011747554,3.72632745126877,5.83899223373756,9.75106066262066,10.0833246839892,6.56813080501028,0.702213187313235,0.257347907114715,0.568326998791185,1.65700618028402,1.87620847984877,1.2604344302271,1.18372367792605,3.34499193970586,1.85120535464854,1.16266972375204,1.87791380979733,1.98501082024188,2.46839774870221,4.26835406605648,3.64809642956351,3.36259971078264,4.61055242111206,2.54992195644706,9.88362758251398,12.1427442607556,0,0.264450566663544,0.853153002140936,0,2.57734922644187,1.21010114774006,2.00140239460383,1.90225626112559,1.42358718463353,3.12928013975621,2.26201687920243,1.98956472041151,2.14460495831032,0.898819408654221,1.72910439899755,1.7922714592893,3.22435431620239,6.28366819353509,3.38123207019241,4.68398054044223,5.62462212786115,6.17195215034803,5.50157872981038,3.98547399544926,3.45397201251025,2.83813477020141,1.1858105083486,1.83529616287703,1.76903095601883,1.12431056192427,1.01430060694251,2.41177159752417,1.2731292589071,3.16465751195892,0.972811360650212,1.09824565275233,2.87536413054709,2.60498663367952,1.24815069245824,2.02063102357689,1.61457672169721,0.482443521363367,6.09685527549795,1.89491411770485,3.25929952884052,3.22515662972857,4.92849521405854,4.52266895092903,7.61739650835244,15.0252908850505,8.51229778173431,10.85176979279,12.2780171866265,10.651115456523,12.4333186943445,12.43981903801,6.03165135757089,3.26343410291226,2.95058563811422,1.65562047782839,7.54587772942622,11.6039569726281,31.803379403075,5.04941854408746,5.04813151066011,5.0757036758563,3.66219776145758,4.06246956519338,6.90675889655422,7.35998980050964,3.23848561339915,3.50707029493574,5.53402889125133,4.4984984299053,5.39372323791421,7.65682095769198,7.4928001302645,8.90838664051691,2.65490276679926,1.21390318077491,1.51161778482376,0.754420319023592,3.54362271456927,2.45948118355142,5.94385074286909,3.99887102425256,5.70395805415554,3.16036757935816,2.10837217149998,1.03135543248187,2.7235168460303,1.44048875225048,2.06973894052407,3.85806663056866,5.32020700926821,6.77801506887868,6.2528627828806,7.91608867697958,16.8963629805871,3.1774810629573,2.42581237860458,7.25499512942512,9.52640117505843,8.62474826472629,7.28171298419132,7.2221995887827,1.1659233465194,10.0129663085675,1.70870880797853,3.50857675537478,3.1483069652851,0.376736914009382,0.683471138605126,0.915112692826091,0.169978429993855,0,0.138199973804424,0,1.58167996790568,3.25311147402958,3.88819226958485,4.80903080833278,3.9305261474312,5.25970950900801,4.71124697634415,4.71160695571253,2.85152941241944,3.10669656543463,1.12738587736838,4.48549638131936,2.81279433777066,2.91676782516071,5.55387240954244,7.09615727061268,4.45957506853865,5.4685841634459,2.09718688851422,0,1.15212002503146,1.89606672376907,4.66267995167378,4.10843828659309,2.98817892848929,1.43221356533985,2.58285761215644,1.9231271923195,1.62458479892035,0.908698049533329,0.990688486514998,0.302478555410522,0.584747284438515,0.481059208201647,0.233753804363138,9.74940649545409,2.21985953374065,2.42227412845584,5.37230772365051,9.85266929564171,23.8356743823001,11.9048555773722,4.93047271881851,0.501572104035363,32.7556068717899,26.6988637174163,25.2074025913335,31.1054260042075,24.6629707117431,21.9064230243013,20.925697507186,21.1650965515384,24.469690085147,15.0150490408028,0.415149390336707,0.399024873401031,2.73173769206615,6.80698807791223,3.14419743941973,3.8607136774503,4.66718128383392,4.73880631649457,6.73930340142812,5.81203587056734,8.87177549615839,4.33840585187975,4.68207537349412,5.50616310681876,6.43277252302869,4.28664322154766,7.53248118641561,8.10218725947561,6.59337441285291,5.15196220470391,5.82877729055206,7.63145966485151,5.00715998889374,6.83128158171944,6.58765662907314,6.00763716030903,5.12198324043763,4.20911538300549,5.43216455383447,1.68342681497322,6.4062909787054,6.40279135441163,9.00308294973317,4.33823155320705,5.5942917184531,6.49507502638659,6.08222181958062,6.23126056740065,5.35607329792761,3.75005412503176,5.33296021926969 | |phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,1.26184866143295,0.822686601634433,0.42438965179803,3.57181818634493,0.496454756004426,0,0.159992422793407,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2191658874356,13.584508783415,3.85448179539531,3.12956537739216,0.65407546914134,0.219686182734472,1.36100929351998,11.4788865732797,5.75010257459886,0,0,1.34437519656986,18.7799388306241,11.4613375975503,7.21940929188419,3.43937983461316,2.64495489636016,3.1691570175309,19.6529828600097,20.4537803105562,2.6996991518442,2.96659908770092,1.4209602298922,4.19440154725767,3.45796474789399,6.73982480005105,8.6403800532282,5.25812403378455,15.996455126613,15.6816664075646,2.69479758272899,2.58782771749238,3.67687514644008,5.50579404996943,6.38436690425939,3.99376986466233,10.5509030184155,11.8933936683133,5.73004707612436,4.18774498502071,7.87867654044352,8.40390362772456,13.8475435172624,13.0981946335175,8.01517617048792,14.0093457666391,18.5906037862692,17.6817338108023,2.58127163094416,0,0.539703191637817,0,0,1.82577746171277,0,0,0,2.67602497575693,0,0,0,0.865964164044856,0.506719730950197,2.02209778005913,1.82694207550496,5.95557132388495,3.71105347662062,3.29622120855658,5.78484408793068,4.38169444786511,2.71300752994721,5.29149182110672,3.89566433121994,12.1125534189843,3.61498392299779,3.5384422077995,6.79420769779119,1.76673214768315,2.90925151881133,0,4.9772735491963,5.65506108396329,2.55457055208591,0.479260498023681,0.599902730993408,1.14363204365758,6.44099749440738,13.2675174817402,8.16753288733619,15.2965401769203,19.6900902144355,4.57133698031032,13.7905073607594,11.2023300235348,1.49288364732112,1.26361379216837,3.57751155007006,1.82168620147785,2.75882525320168,4.14142898552303,6.48030716693575,7.00775941258677,5.12454881139399,5.80950692270319,7.76110112217047,0.215567992932842,0.567318240503458,1.58356011747554,3.72632745126877,5.83899223373756,9.75106066262066,10.0833246839892,6.56813080501028,0.702213187313235,0.257347907114715,0.568326998791185,1.65700618028402,1.87620847984877,1.2604344302271,1.18372367792605,3.34499193970586,1.85120535464854,1.16266972375204,1.87791380979733,1.98501082024188,2.46839774870221,4.26835406605648,3.64809642956351,3.36259971078264,4.61055242111206,2.54992195644706,9.88362758251398,12.1427442607556,0,0.264450566663544,0.853153002140936,0,2.57734922644187,1.21010114774006,2.00140239460383,1.90225626112559,1.42358718463353,3.12928013975621,2.26201687920243,1.98956472041151,2.14460495831032,0.898819408654221,1.72910439899755,1.7922714592893,3.22435431620239,6.28366819353509,3.38123207019241,4.68398054044223,5.62462212786115,6.17195215034803,5.50157872981038,3.98547399544926,3.45397201251025,2.83813477020141,1.1858105083486,1.83529616287703,1.76903095601883,1.12431056192427,1.01430060694251,2.41177159752417,1.2731292589071,3.16465751195892,0.972811360650212,1.09824565275233,2.87536413054709,2.60498663367952,1.24815069245824,2.02063102357689,1.61457672169721,0.482443521363367,6.09685527549795,1.89491411770485,3.25929952884052,3.22515662972857,4.92849521405854,4.52266895092903,7.61739650835244,15.0252908850505,8.51229778173431,10.85176979279,12.2780171866265,10.651115456523,12.4333186943445,12.43981903801,6.03165135757089,3.26343410291226,2.95058563811422,1.65562047782839,7.54587772942622,11.6039569726281,31.803379403075,5.04941854408746,5.04813151066011,5.0757036758563,3.66219776145758,4.06246956519338,6.90675889655422,7.35998980050964,3.23848561339915,3.50707029493574,5.53402889125133,4.4984984299053,5.39372323791421,7.65682095769198,7.4928001302645,8.90838664051691,2.65490276679926,1.21390318077491,1.51161778482376,0.754420319023592,3.54362271456927,2.45948118355142,5.94385074286909,3.99887102425256,5.70395805415554,3.16036757935816,2.10837217149998,1.03135543248187,2.7235168460303,1.44048875225048,2.06973894052407,3.85806663056866,5.32020700926821,6.77801506887868,6.2528627828806,7.91608867697958,16.8963629805871,3.1774810629573,2.42581237860458,7.25499512942512,9.52640117505843,8.62474826472629,7.28171298419132,7.2221995887827,1.1659233465194,10.0129663085675,1.70870880797853,3.50857675537478,3.1483069652851,0.376736914009382,0.683471138605126,0.915112692826091,0.169978429993855,0,0.138199973804424,0,1.58167996790568,3.25311147402958,3.88819226958485,4.80903080833278,3.9305261474312,5.25970950900801,4.71124697634415,4.71160695571253,2.85152941241944,3.10669656543463,1.12738587736838,4.48549638131936,2.81279433777066,2.91676782516071,5.55387240954244,7.09615727061268,4.45957506853865,5.4685841634459,2.09718688851422,0,1.15212002503146,1.89606672376907,4.66267995167378,4.10843828659309,2.98817892848929,1.43221356533985,2.58285761215644,1.9231271923195,1.62458479892035,0.908698049533329,0.990688486514998,0.302478555410522,0.584747284438515,0.481059208201647,0.233753804363138,9.74940649545409,2.21985953374065,2.42227412845584,5.37230772365051,9.85266929564171,23.8356743823001,11.9048555773722,4.93047271881851,0.501572104035363,32.7556068717899,26.6988637174163,25.2074025913335,31.1054260042075,24.6629707117431,21.9064230243013,20.925697507186,21.1650965515384,24.469690085147,15.0150490408028,0.415149390336707,0.399024873401031,2.73173769206615,6.80698807791223,3.14419743941973,3.8607136774503,4.66718128383392,4.73880631649457,6.73930340142812,5.81203587056734,8.87177549615839,4.33840585187975,4.68207537349412,5.50616310681876,6.43277252302869,4.28664322154766,7.53248118641561,8.10218725947561,6.59337441285291,5.15196220470391,5.82877729055206,7.63145966485151,5.00715998889374,6.83128158171944,6.58765662907314,6.00763716030903,5.12198324043763,4.20911538300549,5.43216455383447,1.68342681497322,6.4062909787054,6.40279135441163,9.00308294973317,4.33823155320705,5.5942917184531,6.49507502638659,6.08222181958062,6.23126056740065,5.35607329792761,3.75005412503176,5.33296021926969 | ||
|short_description=p3@Gas7 | |||
}} | }} |
Latest revision as of 22:54, 1 October 2015
Short description: | p3@Gas7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gas7_5end |
Coexpression cluster: | NA |
Association with transcript: | -33bp_to_ENSMUST00000108681_5end |
EntrezGene: | Gas7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 6.39e-07 | 39 |
electrically active cell | 6.39e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.11e-16 | 95 |
ectoderm | 1.11e-16 | 95 |
presumptive ectoderm | 1.11e-16 | 95 |
nervous system | 3.96e-14 | 75 |
ecto-epithelium | 1.43e-13 | 73 |
central nervous system | 4.57e-13 | 73 |
neurectoderm | 6.02e-13 | 64 |
neural plate | 6.02e-13 | 64 |
presumptive neural plate | 6.02e-13 | 64 |
neural tube | 1.86e-12 | 52 |
neural rod | 1.86e-12 | 52 |
future spinal cord | 1.86e-12 | 52 |
neural keel | 1.86e-12 | 52 |
regional part of nervous system | 2.40e-12 | 54 |
gray matter | 7.05e-12 | 34 |
structure with developmental contribution from neural crest | 1.00e-10 | 92 |
pre-chordal neural plate | 6.35e-10 | 49 |
brain | 1.22e-09 | 47 |
future brain | 1.22e-09 | 47 |
regional part of brain | 1.26e-09 | 46 |
anterior neural tube | 1.37e-09 | 40 |
regional part of forebrain | 2.38e-09 | 39 |
forebrain | 2.38e-09 | 39 |
future forebrain | 2.38e-09 | 39 |
brain grey matter | 2.47e-09 | 29 |
regional part of telencephalon | 2.47e-09 | 29 |
telencephalon | 2.47e-09 | 29 |
occipital lobe | 4.12e-08 | 10 |
visual cortex | 4.12e-08 | 10 |
neocortex | 4.12e-08 | 10 |
tube | 9.04e-08 | 114 |
anatomical conduit | 1.11e-07 | 122 |
cerebral cortex | 8.14e-07 | 21 |
cerebral hemisphere | 8.14e-07 | 21 |
pallium | 8.14e-07 | 21 |