FFCP PHASE1:Mm9::chr11:70465538..70465630,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:70465538..70465630,+ to FFCP PHASE1:Mm9::chr11:70465538..70465630,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=462 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr11:70465538..70465630,+ | |||
|description=CAGE_peak_at_chr11:70465538..70465630,+ | |||
|id=chr11:70465538..70465630,+ | |||
|ontology_enrichment_celltype=CL:0000219!4.57e-15!54;CL:0002320!7.38e-15!46;CL:0000134!7.38e-15!46;CL:0000063!1.46e-14!66;CL:0000988!1.71e-11!32;CL:0002032!1.71e-11!32;CL:0000037!1.71e-11!32;CL:0000566!1.71e-11!32;CL:0000837!1.71e-11!32;CL:0002031!3.90e-11!25;CL:0000738!3.25e-10!17;CL:0002087!3.25e-10!17;CL:0002371!6.73e-09!118;CL:0000144!1.07e-08!121;CL:0000012!1.07e-08!121;CL:0000542!8.69e-08!13;CL:0000051!8.69e-08!13;CL:0000548!1.01e-07!115;CL:0000004!1.01e-07!115;CL:0000255!1.01e-07!115;CL:0000838!2.11e-07!12;CL:0000034!9.68e-07!97;CL:0000084!9.83e-07!11;CL:0000827!9.83e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,1.13e-15,54;CL:0002320,2.65e-15,46;CL:0000134,2.65e-15,46;CL:0000988,7.73e-12,32;CL:0002032,7.73e-12,32;CL:0000037,7.73e-12,32;CL:0000837,7.73e-12,32;CL:0002031,1.71e-11,25;CL:0000738,2.37e-10,17;CL:0002087,2.37e-10,17;CL:0000542,6.93e-08,13;CL:0000051,6.93e-08,13;CL:0000838,1.71e-07,12;CL:0000084,8.14e-07,11;CL:0000827,8.14e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.38e-15!46;UBERON:0002405!5.07e-11!70;UBERON:0002193!9.33e-11!48;UBERON:0002390!1.44e-10!45;UBERON:0003061!1.44e-10!45;UBERON:0004119!8.19e-08!130;UBERON:0000925!8.19e-08!130;UBERON:0006595!8.19e-08!130;UBERON:0001007!1.57e-07!128;UBERON:0001555!1.57e-07!128;UBERON:0007026!1.57e-07!128;UBERON:0000490!3.86e-07!66;UBERON:0004921!8.36e-07!126;UBERON:0004185!8.36e-07!126;UBERON:0002371!8.61e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.65e-15,46;UBERON:0002193,3.57e-11,48;UBERON:0002405,3.57e-11,48;UBERON:0002390,7.85e-11,45;UBERON:0003061,7.85e-11,45;UBERON:0004119,3.27e-09,118;UBERON:0000925,3.27e-09,118;UBERON:0006595,3.27e-09,118;UBERON:0001007,6.60e-09,116;UBERON:0001555,6.60e-09,116;UBERON:0007026,6.60e-09,116;UBERON:0004921,4.31e-08,114;UBERON:0000490,2.28e-07,66;UBERON:0001041,5.83e-07,80;UBERON:0002371,7.12e-07,16 | |||
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| ||
|short_description=p@chr11:70465538..70465630,+ | |||
}} | }} |
Latest revision as of 21:31, 3 August 2015
Short description: | p@chr11:70465538..70465630, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:70465538..70465630, + |
Coexpression cluster: | MCL_coexpression_mm9:462 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 1.13e-15 | 54 |
connective tissue cell | 2.65e-15 | 46 |
mesenchymal cell | 2.65e-15 | 46 |
hematopoietic cell | 7.73e-12 | 32 |
hematopoietic oligopotent progenitor cell | 7.73e-12 | 32 |
hematopoietic stem cell | 7.73e-12 | 32 |
hematopoietic multipotent progenitor cell | 7.73e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 1.71e-11 | 25 |
leukocyte | 2.37e-10 | 17 |
nongranular leukocyte | 2.37e-10 | 17 |
lymphocyte | 6.93e-08 | 13 |
common lymphoid progenitor | 6.93e-08 | 13 |
lymphoid lineage restricted progenitor cell | 1.71e-07 | 12 |
T cell | 8.14e-07 | 11 |
pro-T cell | 8.14e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.65e-15 | 46 |
hemolymphoid system | 3.57e-11 | 48 |
immune system | 3.57e-11 | 48 |
hematopoietic system | 7.85e-11 | 45 |
blood island | 7.85e-11 | 45 |
endoderm-derived structure | 3.27e-09 | 118 |
endoderm | 3.27e-09 | 118 |
presumptive endoderm | 3.27e-09 | 118 |
digestive system | 6.60e-09 | 116 |
digestive tract | 6.60e-09 | 116 |
primitive gut | 6.60e-09 | 116 |
subdivision of digestive tract | 4.31e-08 | 114 |
unilaminar epithelium | 2.28e-07 | 66 |
foregut | 5.83e-07 | 80 |
bone marrow | 7.12e-07 | 16 |