FFCP PHASE1:Mm9::chr12:101758988..101759063,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr12:101758988..101759063,- to FFCP PHASE1:Mm9::chr12:101758988..101759063,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=104718 | |EntrezGene=104718 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=663 | |||
|TSSclassifier=NA | |||
|UniProt=E9Q6P5 | |UniProt=E9Q6P5 | ||
|association_with_transcript=0bp_to_ENSMUST00000062957,NM_001033213,uc007oss.2_5end | |||
|cluster_id=chr12:101758988..101759063,- | |||
|description=CAGE_peak_1_at_Ttc7b_5end | |||
|id=chr12:101758988..101759063,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.35e-10!102;UBERON:0000924!1.35e-10!102;UBERON:0006601!1.35e-10!102;UBERON:0000025!3.56e-09!114;UBERON:0000955!3.90e-09!50;UBERON:0006238!3.90e-09!50;UBERON:0001017!7.04e-09!73;UBERON:0005743!7.04e-09!73;UBERON:0001049!7.86e-09!52;UBERON:0005068!7.86e-09!52;UBERON:0006241!7.86e-09!52;UBERON:0007135!7.86e-09!52;UBERON:0000073!8.89e-09!75;UBERON:0001016!8.89e-09!75;UBERON:0002616!1.12e-08!49;UBERON:0004111!1.31e-08!122;UBERON:0000033!1.60e-08!63;UBERON:0002346!1.92e-08!71;UBERON:0003075!1.92e-08!71;UBERON:0007284!1.92e-08!71;UBERON:0002021!4.77e-08!10;UBERON:0000411!4.77e-08!10;UBERON:0001950!4.77e-08!10;UBERON:0002020!1.16e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,9.36e-12,92;UBERON:0004121,5.24e-10,95;UBERON:0000924,5.24e-10,95;UBERON:0006601,5.24e-10,95;UBERON:0000073,7.88e-10,54;UBERON:0000025,3.56e-09,114;UBERON:0001017,7.04e-09,73;UBERON:0001049,7.86e-09,52;UBERON:0005068,7.86e-09,52;UBERON:0006241,7.86e-09,52;UBERON:0007135,7.86e-09,52;UBERON:0001016,8.89e-09,75;UBERON:0004111,1.31e-08,122;UBERON:0010371,3.07e-08,73;UBERON:0002021,4.77e-08,10;UBERON:0000411,4.77e-08,10;UBERON:0001950,4.77e-08,10;UBERON:0002346,5.57e-08,64;UBERON:0003075,5.57e-08,64;UBERON:0007284,5.57e-08,64;UBERON:0000955,9.59e-08,47;UBERON:0006238,9.59e-08,47;UBERON:0002020,1.16e-07,34;UBERON:0002616,2.59e-07,46 | |||
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| |phase1_expression=7.8472935081349,1.74487703819681,1.36499771816861,2.11724947914781,2.50447864973174,2.01455126294268,1.63528848416868,5.03580961422147,5.20918271961167,5.61754863172784,5.99262888789267,6.06268408364557,13.8672591244277,13.2879011676876,4.99664642723494,3.64455481301687,0.699561878128147,7.09789872056035,9.87223921961319,6.79023442876848,22.0262121491271,10.7234227296956,10.4479915655574,1.75991665072747,3.44113921600755,2.29692785646008,0.430761996159075,1.07735616342945,1.33016393619462,2.77233142735924,0.443461021310609,0,0,0,1.44425809875637,0.997407872150954,1.22501613757421,53.9905803650611,28.9094077473806,34.5525671022707,59.4113802911324,67.6215030108861,45.6379731849284,12.211991343631,12.5707394712198,9.54443111240744,16.4302182313088,9.81113203712009,9.00713349211335,11.8602238435313,12.0388322597812,8.62515386189829,5.87239121202077,14.5072428402269,18.1490651536931,10.0331180054019,16.0458726365704,11.8604581223812,14.7691016427506,19.0436752537932,12.6766280701236,6.77689064138264,7.11435836888911,11.6986963246582,8.89979726310277,9.2362414942993,13.4820049733282,9.98967593836042,16.1755795201225,14.3106294631592,14.5124223332454,23.7090317055157,20.0990372265968,12.7390431183552,12.8432931164437,7.35375029288017,41.8440347797677,62.9498576759975,52.379827840379,17.4089899803856,21.0421580285542,14.0646610050325,41.3190838522044,33.7657566019008,43.2419041208373,21.2132581541041,17.3693450574906,19.7583412574819,14.9180600866373,14.5097395405028,46.9580471696718,33.5565312022741,6.79971333707751,11.873470216032,11.695975514058,10.3046184032387,19.802663238577,3.06774580640504,3.11743205523443,5.3000936176551,10.140726223921,14.115912515575,35.6727335589304,21.3320010945999,3.24736561516821,2.02687892380079,4.54972000513305,17.9268691158924,17.6077760880077,29.0946592567057,13.1848848342263,15.2232739156071,12.4532368518272,16.4287678202359,19.2845479702556,22.9969862133306,13.3485282576562,30.9442623808611,21.230653246797,19.2502551437417,20.0965781798958,17.455509112868,1.86391761218122,53.5788858531131,48.5916359807216,5.62005521458901,14.4976300652164,10.7982491578813,11.4363204365758,45.9857262972806,59.0175777636028,14.4502504929794,66.7485389538342,81.8289463457058,54.6482557191643,60.3537498612058,12.7299204812895,21.8956268273764,29.3158399783063,14.7309299120532,13.9228873970093,11.0353010128067,10.6236656585156,14.4676625122286,18.1657452734045,15.7579875950365,19.1151518101847,30.0095910057258,15.5208954911646,11.9136830505726,16.3634545472472,12.9325482132269,13.6243152120543,13.9300866608867,14.610531684964,12.3401245427466,8.42655824775882,13.6394390770799,12.7873574728017,17.6056906655177,15.7132460187334,20.5270750065557,23.4377288229358,20.46348010173,20.3632589011339,23.0208605302904,23.6080593231665,24.6374872394728,23.6966183875412,27.0876315730507,36.8863083433644,37.4271967808851,37.9821699453518,39.5908935343097,58.0400258036991,14.4066457330998,3.30418782983798,4.7601101999438,15.5700422890721,12.7730169523241,11.8558064416326,12.1010114774006,10.8965241483986,6.84812254005213,6.64340686162316,10.5407331023367,13.069430857614,12.5342577385925,13.6474860983384,8.08937467788799,5.40345124686736,5.97423819763102,6.2590407314517,12.5673363870702,16.9061603509621,12.0154283428735,12.6069116658957,16.9027325935668,16.3150265780584,13.8753539100826,11.7749045881031,18.3861774243483,24.0126627940591,9.00963570866908,8.25547779475453,5.62155280962134,6.8972441272091,8.68237775108701,8.65727896056827,7.48009957372108,8.75530224585191,7.13859674289012,20.1275489138296,10.4199465347181,8.7370548472077,9.34541848404313,10.9432422248366,8.68398338454061,24.5721742921584,12.6959245886225,12.385338209594,13.9190970335654,11.0304416695596,17.0856382590652,19.9956658344252,27.5138443479496,23.3300013277163,21.0391455166336,29.0207678956627,24.2517705779292,23.4851575337618,25.0242871346015,7.53956419696361,9.24639662491806,27.538799289066,12.6930903300177,40.4587486769236,41.6101487402321,7.70494243270374,38.6280518622691,12.9358369960665,12.1036010731958,14.4333676480975,16.010909462821,16.932699230262,20.0984336860071,17.0020494703456,16.0740721851222,22.1361155650053,46.2702695647402,19.7296718439493,9.97167380536629,15.3113741792362,17.9817434040064,30.5313818181915,9.22566417388929,8.46505959501303,11.127699705598,19.1946230372502,19.3684143204674,16.5394107627662,15.2684166380552,19.9638531895444,28.4433082142234,25.3004660579997,47.442349894166,12.9367050186439,10.0834212657534,10.9954881215341,10.0738406464848,15.0739198595933,12.1290795969408,12.176627524557,20.0946866415636,22.9978273902436,38.1297727554876,6.83638033970382,16.6535115470895,15.5005849628069,19.6620135265788,23.3969794246147,32.0074754502869,7.57850175237612,38.197612214165,7.86006051670122,11.9704383418669,8.51894825900674,7.53473828018764,6.01454601972511,8.23601423543482,19.8874763092811,17.0740771834863,19.4861963064238,4.77335309007557,7.75023184273782,14.4356821660063,10.1525020372493,6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| ||
|short_description=p1@Ttc7b | |||
}} | }} |
Latest revision as of 04:46, 26 September 2015
Short description: | p1@Ttc7b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ttc7b_5end |
Coexpression cluster: | MCL_coexpression_mm9:663 |
Association with transcript: | 0bp_to_ENSMUST00000062957, NM_001033213, uc007oss.2_5end |
EntrezGene: | Ttc7b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 9.36e-12 | 92 |
ectoderm-derived structure | 5.24e-10 | 95 |
ectoderm | 5.24e-10 | 95 |
presumptive ectoderm | 5.24e-10 | 95 |
regional part of nervous system | 7.88e-10 | 54 |
tube | 3.56e-09 | 114 |
central nervous system | 7.04e-09 | 73 |
neural tube | 7.86e-09 | 52 |
neural rod | 7.86e-09 | 52 |
future spinal cord | 7.86e-09 | 52 |
neural keel | 7.86e-09 | 52 |
nervous system | 8.89e-09 | 75 |
anatomical conduit | 1.31e-08 | 122 |
ecto-epithelium | 3.07e-08 | 73 |
occipital lobe | 4.77e-08 | 10 |
visual cortex | 4.77e-08 | 10 |
neocortex | 4.77e-08 | 10 |
neurectoderm | 5.57e-08 | 64 |
neural plate | 5.57e-08 | 64 |
presumptive neural plate | 5.57e-08 | 64 |
brain | 9.59e-08 | 47 |
future brain | 9.59e-08 | 47 |
gray matter | 1.16e-07 | 34 |
regional part of brain | 2.59e-07 | 46 |