FFCP PHASE1:Mm9::chr14:30822348..30822360,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=218865 | |EntrezGene=218865 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000125796_5end | |||
|cluster_id=chr14:30822348..30822360,+ | |||
|description=CAGE_peak_4_at_Chdh_5end | |||
|id=chr14:30822348..30822360,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.23e-08!9;CL:0002251!3.23e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.62e-12,9;CL:0002251,6.62e-12,9;CL:0000066,4.82e-10,25;CL:0000239,5.58e-09,6;CL:0000677,5.58e-09,6;CL:0000584,5.58e-09,6;CL:0000223,2.71e-08,20;CL:0000075,1.72e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.21e-13!15;UBERON:0004119!1.45e-11!130;UBERON:0000925!1.45e-11!130;UBERON:0006595!1.45e-11!130;UBERON:0001242!2.11e-11!13;UBERON:0000060!2.11e-11!13;UBERON:0001262!2.11e-11!13;UBERON:0004786!2.11e-11!13;UBERON:0001007!1.60e-10!128;UBERON:0001555!1.60e-10!128;UBERON:0007026!1.60e-10!128;UBERON:0003929!7.11e-10!55;UBERON:0004921!1.47e-09!126;UBERON:0004185!1.47e-09!126;UBERON:0004923!5.33e-09!24;UBERON:0003350!3.23e-08!9;UBERON:0004808!3.23e-08!9;UBERON:0001277!3.23e-08!9;UBERON:0000160!2.66e-07!43;UBERON:0005911!5.47e-07!69;UBERON:0003100!6.83e-07!11;UBERON:0000485!9.24e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.92e-19,15;UBERON:0001242,7.49e-17,13;UBERON:0001262,7.49e-17,13;UBERON:0004786,7.49e-17,13;UBERON:0000160,1.69e-15,31;UBERON:0004923,3.09e-15,24;UBERON:0005409,1.91e-13,47;UBERON:0004119,6.42e-13,118;UBERON:0000925,6.42e-13,118;UBERON:0006595,6.42e-13,118;UBERON:0003350,6.62e-12,9;UBERON:0004808,6.62e-12,9;UBERON:0001277,6.62e-12,9;UBERON:0001007,1.67e-11,116;UBERON:0001555,1.67e-11,116;UBERON:0007026,1.67e-11,116;UBERON:0004921,3.29e-10,114;UBERON:0007023,2.35e-09,51;UBERON:0000485,2.96e-09,11;UBERON:0004175,1.46e-07,9;UBERON:0003929,1.69e-07,55;UBERON:0003975,6.43e-07,5 | |||
|phase1_expression=0,30.0118850569851,27.7549536027617,29.9439569193762,29.0519523368881,8.2260843236826,10.2789561862031,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,8.47959840805055,8.48814339948529,20.6723507081407,23.26114779259,15.0829862880122,29.453630015738,23.1867719379136,11.3082560434205,0,0,0,7.79899373328441,3.15845826181135,6.32925004413344,0,0,0,0,0,0,0,0,0,0,0,0,0.58328969722285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0.579728977403356,1.72084775396277,4.75979933595425,1.61910957491345,1.94932925234301,3.58421509677868,2.24711072210803,0,0,0,0.14084341977668,0,0,0,0,0,0,3.19714863213368,0,0,0,0,0,0,0,0,3.95511948374998,0.86759614151947,0,0,0,0,1.86391761218122,0,0,6.89734049063197,0,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0.305518091550949,1.24406970610093,5.81262344397452,4.41927897361595,0,0,0,0.30140963567143,0.0680364991513279,0,0,2.32833033665114,0,0,0.527853372491847,0.219195732427575,0.278047249225598,4.179025998266,5.55611768301447,0,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0,14.2080076683033,4.49565963328025,0,0,0,0,0,0.190225626112559,5.69434873853414,0.329397909448022,0.502670417600539,0.397912944082302,1.16978452271472,2.69645822596266,4.53889904736858,7.76650965692032,0,0.114248512609729,0,0,0.193952487167626,0.280543279561274,0.885311519739602,2.80459281161244,3.45397201251025,2.46794327843601,2.37162101669719,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0.324270453550071,1.09824565275233,2.87536413054709,0.744281895337007,0.312037673114561,1.01031551178845,1.79397413521912,0.964887042726734,0,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0.491764273019036,1.37968373152366,0,0.117211686592203,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,3.54850213020672,0.534196811001766,0.325773918707152,11.3829384851049,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0,17.6003781047783,9.10877904714427,0.441056796109924,2.14352128823924,4.19807509409354,2.17126529741361,2.14870219205646,1.31312719796049,5.82961673259701,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0.108005340821801,1.04544148007234,0.436725127492355,1.07891477107857,1.57041565878138,3.14107130380836,1.8146096260851,1.24267862617385,2.25477175473676,0.149516546043979,0,0,0,0,0,0.13020438484395,0.104859344425711,0.966336483304024,1.15212002503146,0.316011120628178,0.202725215290164,0.616265742988964,2.20865399062252,1.25318686967237,1.78813219303138,1.80293174279953,1.03382669022204,0.908698049533329,1.600342939755,1.10908803650525,0.974578807397524,0.962118416403295,1.63627663054197,0.906921534460845,1.10992976687032,0.269141569828427,4.86865387455827,0,2.81523713176773,13.5532201957776,7.07415650960917,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0.183843508450014,0.44449345560323,0,0.320919209591815,0.252697211763798,0,0,0.187283014939765,0.256100609619477,0.287177344778066,0,0,0.38581844092741,0,0.441596760403192,0,0.177475806159338,0.953744759789284,0,0,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.197008964751127,0,0,0.385813221962283,0.999242311751784,2.10538447600868,0.214871054048298,0.191288332068843,0.441182838239031,0.695603506861264 | |phase1_expression=0,30.0118850569851,27.7549536027617,29.9439569193762,29.0519523368881,8.2260843236826,10.2789561862031,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,8.47959840805055,8.48814339948529,20.6723507081407,23.26114779259,15.0829862880122,29.453630015738,23.1867719379136,11.3082560434205,0,0,0,7.79899373328441,3.15845826181135,6.32925004413344,0,0,0,0,0,0,0,0,0,0,0,0,0.58328969722285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0.579728977403356,1.72084775396277,4.75979933595425,1.61910957491345,1.94932925234301,3.58421509677868,2.24711072210803,0,0,0,0.14084341977668,0,0,0,0,0,0,3.19714863213368,0,0,0,0,0,0,0,0,3.95511948374998,0.86759614151947,0,0,0,0,1.86391761218122,0,0,6.89734049063197,0,0,0.127070227073065,0.149790639404823,0,0,0,0,0,0,0.305518091550949,1.24406970610093,5.81262344397452,4.41927897361595,0,0,0,0.30140963567143,0.0680364991513279,0,0,2.32833033665114,0,0,0.527853372491847,0.219195732427575,0.278047249225598,4.179025998266,5.55611768301447,0,0,0.257347907114715,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0,14.2080076683033,4.49565963328025,0,0,0,0,0,0.190225626112559,5.69434873853414,0.329397909448022,0.502670417600539,0.397912944082302,1.16978452271472,2.69645822596266,4.53889904736858,7.76650965692032,0,0.114248512609729,0,0,0.193952487167626,0.280543279561274,0.885311519739602,2.80459281161244,3.45397201251025,2.46794327843601,2.37162101669719,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0.324270453550071,1.09824565275233,2.87536413054709,0.744281895337007,0.312037673114561,1.01031551178845,1.79397413521912,0.964887042726734,0,0,0,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0.491764273019036,1.37968373152366,0,0.117211686592203,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,3.54850213020672,0.534196811001766,0.325773918707152,11.3829384851049,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0,17.6003781047783,9.10877904714427,0.441056796109924,2.14352128823924,4.19807509409354,2.17126529741361,2.14870219205646,1.31312719796049,5.82961673259701,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0.108005340821801,1.04544148007234,0.436725127492355,1.07891477107857,1.57041565878138,3.14107130380836,1.8146096260851,1.24267862617385,2.25477175473676,0.149516546043979,0,0,0,0,0,0.13020438484395,0.104859344425711,0.966336483304024,1.15212002503146,0.316011120628178,0.202725215290164,0.616265742988964,2.20865399062252,1.25318686967237,1.78813219303138,1.80293174279953,1.03382669022204,0.908698049533329,1.600342939755,1.10908803650525,0.974578807397524,0.962118416403295,1.63627663054197,0.906921534460845,1.10992976687032,0.269141569828427,4.86865387455827,0,2.81523713176773,13.5532201957776,7.07415650960917,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0.183843508450014,0.44449345560323,0,0.320919209591815,0.252697211763798,0,0,0.187283014939765,0.256100609619477,0.287177344778066,0,0,0.38581844092741,0,0.441596760403192,0,0.177475806159338,0.953744759789284,0,0,0.0846146078916765,0,0,0.135804113845862,0.561142271657738,0,0.197008964751127,0,0,0.385813221962283,0.999242311751784,2.10538447600868,0.214871054048298,0.191288332068843,0.441182838239031,0.695603506861264 | ||
|short_description=p4@Chdh | |||
}} | }} |
Latest revision as of 20:38, 25 September 2015
Short description: | p4@Chdh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Chdh_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 0bp_to_ENSMUST00000125796_5end |
EntrezGene: | Chdh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.62e-12 | 9 |
epithelial cell of alimentary canal | 6.62e-12 | 9 |
epithelial cell | 4.82e-10 | 25 |
brush border epithelial cell | 5.58e-09 | 6 |
gut absorptive cell | 5.58e-09 | 6 |
enterocyte | 5.58e-09 | 6 |
endodermal cell | 2.71e-08 | 20 |
columnar/cuboidal epithelial cell | 1.72e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.92e-19 | 15 |
intestinal mucosa | 7.49e-17 | 13 |
wall of intestine | 7.49e-17 | 13 |
gastrointestinal system mucosa | 7.49e-17 | 13 |
intestine | 1.69e-15 | 31 |
organ component layer | 3.09e-15 | 24 |
gastrointestinal system | 1.91e-13 | 47 |
endoderm-derived structure | 6.42e-13 | 118 |
endoderm | 6.42e-13 | 118 |
presumptive endoderm | 6.42e-13 | 118 |
epithelium of mucosa | 6.62e-12 | 9 |
gastrointestinal system epithelium | 6.62e-12 | 9 |
intestinal epithelium | 6.62e-12 | 9 |
digestive system | 1.67e-11 | 116 |
digestive tract | 1.67e-11 | 116 |
primitive gut | 1.67e-11 | 116 |
subdivision of digestive tract | 3.29e-10 | 114 |
adult organism | 2.35e-09 | 51 |
simple columnar epithelium | 2.96e-09 | 11 |
internal genitalia | 1.46e-07 | 9 |
gut epithelium | 1.69e-07 | 55 |
internal female genitalia | 6.43e-07 | 5 |