FFCP PHASE1:Mm9::chr17:32795911..32795922,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=631304 | |EntrezGene=631304 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=G3UW81 | |UniProt=G3UW81 | ||
|association_with_transcript=-432bp_to_ENSMUST00000165061_5end | |||
|cluster_id=chr17:32795911..32795922,+ | |||
|description=CAGE_peak_8_at_Cyp4f40_5end | |||
|id=chr17:32795911..32795922,+ | |||
|ontology_enrichment_celltype=CL:0000239!5.67e-14!6;CL:0000677!5.67e-14!6;CL:0000212!5.67e-14!6;CL:0000584!5.67e-14!6;CL:0002563!5.34e-12!9;CL:0002251!5.34e-12!9;CL:0000075!7.20e-12!7;CL:0000473!5.06e-08!3;CL:0000627!5.06e-08!3;CL:0000682!5.06e-08!3;CL:0000066!1.23e-07!25;CL:0002076!9.03e-07!15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.23e-17,6;CL:0000677,2.23e-17,6;CL:0000584,2.23e-17,6;CL:0000075,7.02e-15,7;CL:0000682,3.83e-13,3;CL:0002563,1.52e-11,9;CL:0002251,1.52e-11,9;CL:0000066,1.04e-09,25;CL:0002076,7.51e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.32e-29!43;UBERON:0000344!3.65e-25!15;UBERON:0005409!2.95e-23!59;UBERON:0001242!8.17e-21!13;UBERON:0000060!8.17e-21!13;UBERON:0001262!8.17e-21!13;UBERON:0004786!8.17e-21!13;UBERON:0004923!1.48e-14!24;UBERON:0003350!5.34e-12!9;UBERON:0004808!5.34e-12!9;UBERON:0001277!5.34e-12!9;UBERON:0001007!6.87e-11!128;UBERON:0001555!6.87e-11!128;UBERON:0007026!6.87e-11!128;UBERON:0004119!1.30e-10!130;UBERON:0000925!1.30e-10!130;UBERON:0006595!1.30e-10!130;UBERON:0000485!1.28e-09!11;UBERON:0004921!3.87e-09!126;UBERON:0004185!3.87e-09!126;UBERON:0000331!1.14e-08!3;UBERON:0002116!1.14e-08!3;UBERON:0001204!1.14e-08!3;UBERON:0001168!1.14e-08!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.68e-33,15;UBERON:0000160,1.23e-28,31;UBERON:0001242,1.23e-25,13;UBERON:0001262,1.23e-25,13;UBERON:0004786,1.23e-25,13;UBERON:0005409,8.69e-21,47;UBERON:0004923,5.76e-20,24;UBERON:0002108,7.20e-18,4;UBERON:0000331,2.69e-14,3;UBERON:0002116,2.69e-14,3;UBERON:0001204,2.69e-14,3;UBERON:0001168,2.69e-14,3;UBERON:0003350,1.52e-11,9;UBERON:0004808,1.52e-11,9;UBERON:0001277,1.52e-11,9;UBERON:0001155,1.49e-09,2;UBERON:0000059,1.49e-09,2;UBERON:0001962,1.81e-09,2;UBERON:0001961,1.81e-09,2;UBERON:0001744,1.81e-09,2;UBERON:0000485,2.05e-09,11;UBERON:0001007,4.14e-09,116;UBERON:0001555,4.14e-09,116;UBERON:0007026,4.14e-09,116;UBERON:0004119,6.66e-09,118;UBERON:0000925,6.66e-09,118;UBERON:0006595,6.66e-09,118;UBERON:0004921,5.77e-07,114 | |||
|phase1_expression=0,2.09385244583617,2.27499619694768,2.11724947914781,4.00716583957078,0.16787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,2.52350209173887,4.59385571292016,1.29228598847722,1.939241094173,4.94060890586572,4.28451220591882,2.88249663851896,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0,0.190225626112559,3.32170343081158,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,1.72910439899755,3.58454291857861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.09385244583617,2.27499619694768,2.11724947914781,4.00716583957078,0.16787927191189,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,2.52350209173887,4.59385571292016,1.29228598847722,1.939241094173,4.94060890586572,4.28451220591882,2.88249663851896,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0,0.190225626112559,3.32170343081158,0.329397909448022,0.251335208800269,0.198956472041151,0.38992817423824,0,1.72910439899755,3.58454291857861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45740418314925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,3.24037433229482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@Cyp4f40 | |||
}} | }} |
Latest revision as of 06:27, 26 September 2015
Short description: | p8@Cyp4f40 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Cyp4f40_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | -432bp_to_ENSMUST00000165061_5end |
EntrezGene: | Cyp4f40 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.23e-17 | 6 |
gut absorptive cell | 2.23e-17 | 6 |
enterocyte | 2.23e-17 | 6 |
columnar/cuboidal epithelial cell | 7.02e-15 | 7 |
M cell of gut | 3.83e-13 | 3 |
intestinal epithelial cell | 1.52e-11 | 9 |
epithelial cell of alimentary canal | 1.52e-11 | 9 |
epithelial cell | 1.04e-09 | 25 |
endo-epithelial cell | 7.51e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.68e-33 | 15 |
intestine | 1.23e-28 | 31 |
intestinal mucosa | 1.23e-25 | 13 |
wall of intestine | 1.23e-25 | 13 |
gastrointestinal system mucosa | 1.23e-25 | 13 |
gastrointestinal system | 8.69e-21 | 47 |
organ component layer | 5.76e-20 | 24 |
small intestine | 7.20e-18 | 4 |
ileal mucosa | 2.69e-14 | 3 |
ileum | 2.69e-14 | 3 |
mucosa of small intestine | 2.69e-14 | 3 |
wall of small intestine | 2.69e-14 | 3 |
epithelium of mucosa | 1.52e-11 | 9 |
gastrointestinal system epithelium | 1.52e-11 | 9 |
intestinal epithelium | 1.52e-11 | 9 |
colon | 1.49e-09 | 2 |
large intestine | 1.49e-09 | 2 |
gut-associated lymphoid tissue | 1.81e-09 | 2 |
mucosa-associated lymphoid tissue | 1.81e-09 | 2 |
lymphoid tissue | 1.81e-09 | 2 |
simple columnar epithelium | 2.05e-09 | 11 |
digestive system | 4.14e-09 | 116 |
digestive tract | 4.14e-09 | 116 |
primitive gut | 4.14e-09 | 116 |
endoderm-derived structure | 6.66e-09 | 118 |
endoderm | 6.66e-09 | 118 |
presumptive endoderm | 6.66e-09 | 118 |
subdivision of digestive tract | 5.77e-07 | 114 |