FFCP PHASE1:Mm9::chr17:47748398..47748493,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr17:47748398..47748493,- to FFCP PHASE1:Mm9::chr17:47748398..47748493,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=53414 | |EntrezGene=53414 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=O54825 | |UniProt=O54825 | ||
|association_with_transcript=0bp_to_ENSMUST00000024783,NM_016859,uc008cvq.2_5end | |||
|cluster_id=chr17:47748398..47748493,- | |||
|description=CAGE_peak_2_at_Bysl_5end | |||
|id=chr17:47748398..47748493,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.47e-10!114;UBERON:0004111!1.17e-08!122;UBERON:0001049!2.33e-07!52;UBERON:0005068!2.33e-07!52;UBERON:0006241!2.33e-07!52;UBERON:0007135!2.33e-07!52;UBERON:0001017!4.94e-07!73;UBERON:0005743!4.94e-07!73 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,6.51e-11,92;UBERON:0000025,1.47e-10,114;UBERON:0004111,1.17e-08,122;UBERON:0001049,2.33e-07,52;UBERON:0005068,2.33e-07,52;UBERON:0006241,2.33e-07,52;UBERON:0007135,2.33e-07,52;UBERON:0001017,4.94e-07,73 | |||
|phase1_expression=8.80818659076367,2.44282785347553,3.63999391511629,1.20985684522732,0.500895729946347,3.52546471014969,2.56973904655078,1.67860320474049,3.51971805379167,4.91535505276186,3.25314139628459,3.90883579077148,1.36960583944965,2.44777126773193,3.99731714178795,6.68168382386426,6.29605690315332,3.47008381894061,3.70208970735495,1.69755860719212,12.5013636522073,3.47518329203099,2.61199789138935,4.15980299262857,4.35877634027623,1.72269589234506,4.73838195774982,3.66301095566011,3.42042155021473,2.26827116783938,5.32153225572731,12.065582795733,17.221814052368,15.8481681015439,2.02196133825892,1.82858109894342,2.04169356262369,11.3003540298965,7.0320181007142,6.80580867165938,7.05877785637217,14.3439551841274,8.73918635456076,5.16176953699867,6.38674666682942,5.13930906052708,8.60630478782843,9.15705656797875,9.66619204031676,9.72149495371417,7.27929392451885,7.18762821824858,5.36904339384756,6.5282592781021,2.68875039313971,5.40244815675489,3.43840127926508,4.64104883049698,8.9019242778223,10.5798195854407,5.07065122804943,8.80995783379743,7.11435836888911,5.84934816232909,3.9554654502679,9.9467216092454,4.79360176829448,8.06858441175265,4.56234294157302,6.88530285491622,5.25812403378455,8.85518051651791,5.52171352379034,4.16468717330844,7.18841032636773,1.83843757322004,3.30347642998166,4.72443150915195,5.52983519722476,7.78129097608144,9.60620257825301,8.85552729946492,5.58365998002762,4.50210088025344,6.57032465440283,5.00868595305235,6.69146899755784,8.94717339961443,4.31639301999149,3.24957708459178,4.63783181922684,9.46466264679525,2.719885334831,7.01614149129162,4.54843492213368,4.92829575807069,6.46044332606059,5.62420064507591,5.71529210126311,3.18005617059306,5.35204995151386,6.41632387071589,0,0,3.030874574157,3.29367825117628,1.51657333504435,7.30776830201984,2.33044095282455,6.67989625791711,7.80683970447611,6.69824052286711,9.91646638201052,7.38540938707851,5.99702406392095,6.1576629751541,4.6967043869531,5.35017620603673,5.30766331169925,6.14714029800155,8.39197770149496,6.30337829075789,0,4.39171195517321,3.14170060220183,3.57639877292028,3.23500836165985,0.599902730993408,2.92261522268049,6.14141621559773,7.77751024791665,8.29318723944905,6.43149984711423,8.69432554923124,6.2336413367868,7.46309810111685,4.48093200941392,5.72272064806428,3.79084137650512,3.99839526184301,4.68433594665733,3.90833577536904,5.04173963454978,5.27466862425003,4.62648194229029,4.61209393025459,4.31027932974753,4.39795730256327,4.74249584452253,6.24050064553804,5.45448484908241,6.1374805079721,4.17070873838397,6.268538997399,5.35033554660653,5.9710280045548,3.51106593656617,2.83082697826187,2.84163499395593,8.28503090142008,10.0846205791871,8.10279276574567,7.10234206755631,8.65762619688577,7.25055430570678,9.99895962426754,8.31647544338819,8.4071046504362,10.0381508447223,9.35754545250843,8.59329381186071,9.5029991826466,8.12335426576887,11.4075455946316,5.88811855979556,6.68879980465349,1.98251269790279,3.17340679996253,6.82522401712749,4.41249676534833,4.89696353023955,3.63030344322017,4.00280478920767,5.89699440948933,8.0669940462567,6.42325923423642,5.7807098024062,3.38226002469956,4.48417400373976,6.29173586057955,5.83572734661674,4.97853183135918,7.77638393907635,6.51216521875454,3.38123207019241,6.51684249105006,5.04276466635827,3.85747009396752,4.36332106157375,5.90440591918409,3.45397201251025,5.67626954040282,7.70776830426587,7.67487486294033,7.66580080941492,9.219346607779,8.92584534109413,9.40590923034426,3.8193877767213,6.32931502391783,4.37765112292595,6.58947391651396,5.75072826109418,5.58211421502755,4.68056509671841,4.54641980304801,5.02312757861354,6.27176577772377,4.98833613449833,7.20067364727842,4.4000543639347,2.8856664581782,4.22442446919304,4.52266895092903,8.09348379012447,4.29294025287157,5.35959489961049,4.87222317227305,6.05928120898451,6.55453258862952,6.90739927463582,5.35201516751593,6.03165135757089,2.17562273527484,6.39293554924747,2.75936746304733,6.42202359951168,6.56385444916338,4.26230857979356,7.32165688892682,3.78609863299508,5.46614242015294,6.03185513651837,5.01834475700359,4.67877215573028,3.67999490025482,4.04810701674894,5.84511715822624,6.32460444714438,6.42642632843614,2.55492153374884,6.05423052468668,4.56083486190013,3.13443233647817,0,4.85561272309963,7.55808892411878,4.14931175462976,5.61073596473468,5.84126781093462,3.6179961043551,2.18120237686503,3.20847640546249,6.63677191665214,5.27093042874994,6.18813259489121,6.80879211507576,4.86164953884538,8.27895576209629,6.21577401591618,7.98031051390231,8.20496560969525,9.21474515371877,9.74287837166718,3.75474732901937,4.66030555900404,3.08739757276947,2.30840754118072,1.77610869365496,3.79971427047382,2.626191568069,2.46211349617592,3.20628920292836,6.30446026835733,5.63873906632914,5.36605856704379,7.40778109478847,9.60679130723924,10.5254555345189,5.49067615695654,4.07948231985253,3.21888340344413,3.59319931891502,3.81868247206045,5.06137589729817,3.86306987541013,5.83228840437727,5.64538399239065,6.5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| |phase1_expression=8.80818659076367,2.44282785347553,3.63999391511629,1.20985684522732,0.500895729946347,3.52546471014969,2.56973904655078,1.67860320474049,3.51971805379167,4.91535505276186,3.25314139628459,3.90883579077148,1.36960583944965,2.44777126773193,3.99731714178795,6.68168382386426,6.29605690315332,3.47008381894061,3.70208970735495,1.69755860719212,12.5013636522073,3.47518329203099,2.61199789138935,4.15980299262857,4.35877634027623,1.72269589234506,4.73838195774982,3.66301095566011,3.42042155021473,2.26827116783938,5.32153225572731,12.065582795733,17.221814052368,15.8481681015439,2.02196133825892,1.82858109894342,2.04169356262369,11.3003540298965,7.0320181007142,6.80580867165938,7.05877785637217,14.3439551841274,8.73918635456076,5.16176953699867,6.38674666682942,5.13930906052708,8.60630478782843,9.15705656797875,9.66619204031676,9.72149495371417,7.27929392451885,7.18762821824858,5.36904339384756,6.5282592781021,2.68875039313971,5.40244815675489,3.43840127926508,4.64104883049698,8.9019242778223,10.5798195854407,5.07065122804943,8.80995783379743,7.11435836888911,5.84934816232909,3.9554654502679,9.9467216092454,4.79360176829448,8.06858441175265,4.56234294157302,6.88530285491622,5.25812403378455,8.85518051651791,5.52171352379034,4.16468717330844,7.18841032636773,1.83843757322004,3.30347642998166,4.72443150915195,5.52983519722476,7.78129097608144,9.60620257825301,8.85552729946492,5.58365998002762,4.50210088025344,6.57032465440283,5.00868595305235,6.69146899755784,8.94717339961443,4.31639301999149,3.24957708459178,4.63783181922684,9.46466264679525,2.719885334831,7.01614149129162,4.54843492213368,4.92829575807069,6.46044332606059,5.62420064507591,5.71529210126311,3.18005617059306,5.35204995151386,6.41632387071589,0,0,3.030874574157,3.29367825117628,1.51657333504435,7.30776830201984,2.33044095282455,6.67989625791711,7.80683970447611,6.69824052286711,9.91646638201052,7.38540938707851,5.99702406392095,6.1576629751541,4.6967043869531,5.35017620603673,5.30766331169925,6.14714029800155,8.39197770149496,6.30337829075789,0,4.39171195517321,3.14170060220183,3.57639877292028,3.23500836165985,0.599902730993408,2.92261522268049,6.14141621559773,7.77751024791665,8.29318723944905,6.43149984711423,8.69432554923124,6.2336413367868,7.46309810111685,4.48093200941392,5.72272064806428,3.79084137650512,3.99839526184301,4.68433594665733,3.90833577536904,5.04173963454978,5.27466862425003,4.62648194229029,4.61209393025459,4.31027932974753,4.39795730256327,4.74249584452253,6.24050064553804,5.45448484908241,6.1374805079721,4.17070873838397,6.268538997399,5.35033554660653,5.9710280045548,3.51106593656617,2.83082697826187,2.84163499395593,8.28503090142008,10.0846205791871,8.10279276574567,7.10234206755631,8.65762619688577,7.25055430570678,9.99895962426754,8.31647544338819,8.4071046504362,10.0381508447223,9.35754545250843,8.59329381186071,9.5029991826466,8.12335426576887,11.4075455946316,5.88811855979556,6.68879980465349,1.98251269790279,3.17340679996253,6.82522401712749,4.41249676534833,4.89696353023955,3.63030344322017,4.00280478920767,5.89699440948933,8.0669940462567,6.42325923423642,5.7807098024062,3.38226002469956,4.48417400373976,6.29173586057955,5.83572734661674,4.97853183135918,7.77638393907635,6.51216521875454,3.38123207019241,6.51684249105006,5.04276466635827,3.85747009396752,4.36332106157375,5.90440591918409,3.45397201251025,5.67626954040282,7.70776830426587,7.67487486294033,7.66580080941492,9.219346607779,8.92584534109413,9.40590923034426,3.8193877767213,6.32931502391783,4.37765112292595,6.58947391651396,5.75072826109418,5.58211421502755,4.68056509671841,4.54641980304801,5.02312757861354,6.27176577772377,4.98833613449833,7.20067364727842,4.4000543639347,2.8856664581782,4.22442446919304,4.52266895092903,8.09348379012447,4.29294025287157,5.35959489961049,4.87222317227305,6.05928120898451,6.55453258862952,6.90739927463582,5.35201516751593,6.03165135757089,2.17562273527484,6.39293554924747,2.75936746304733,6.42202359951168,6.56385444916338,4.26230857979356,7.32165688892682,3.78609863299508,5.46614242015294,6.03185513651837,5.01834475700359,4.67877215573028,3.67999490025482,4.04810701674894,5.84511715822624,6.32460444714438,6.42642632843614,2.55492153374884,6.05423052468668,4.56083486190013,3.13443233647817,0,4.85561272309963,7.55808892411878,4.14931175462976,5.61073596473468,5.84126781093462,3.6179961043551,2.18120237686503,3.20847640546249,6.63677191665214,5.27093042874994,6.18813259489121,6.80879211507576,4.86164953884538,8.27895576209629,6.21577401591618,7.98031051390231,8.20496560969525,9.21474515371877,9.74287837166718,3.75474732901937,4.66030555900404,3.08739757276947,2.30840754118072,1.77610869365496,3.79971427047382,2.626191568069,2.46211349617592,3.20628920292836,6.30446026835733,5.63873906632914,5.36605856704379,7.40778109478847,9.60679130723924,10.5254555345189,5.49067615695654,4.07948231985253,3.21888340344413,3.59319931891502,3.81868247206045,5.06137589729817,3.86306987541013,5.83228840437727,5.64538399239065,6.5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| ||
|short_description=p2@Bysl | |||
}} | }} |
Latest revision as of 14:32, 26 September 2015
Short description: | p2@Bysl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Bysl_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000024783, NM_016859, uc008cvq.2_5end |
EntrezGene: | Bysl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 6.51e-11 | 92 |
tube | 1.47e-10 | 114 |
anatomical conduit | 1.17e-08 | 122 |
neural tube | 2.33e-07 | 52 |
neural rod | 2.33e-07 | 52 |
future spinal cord | 2.33e-07 | 52 |
neural keel | 2.33e-07 | 52 |
central nervous system | 4.94e-07 | 73 |