FFCP PHASE1:Mm9::chr18:66635277..66635296,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr18:66635277..66635296,+ to FFCP PHASE1:Mm9::chr18:66635277..66635296,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:66635277..66635296,+ | |||
|description=CAGE_peak_at_chr18:66635277..66635296,+ | |||
|id=chr18:66635277..66635296,+ | |||
|ontology_enrichment_celltype=CL:0002563!9.26e-19!9;CL:0002251!9.26e-19!9;CL:0000066!1.17e-13!25;CL:0000239!2.84e-13!6;CL:0000677!2.84e-13!6;CL:0000212!2.84e-13!6;CL:0000584!2.84e-13!6;CL:0002076!1.07e-12!15;CL:0000075!3.16e-11!7;CL:0000223!8.96e-11!20;CL:0002250!4.64e-07!3;CL:0000473!5.31e-07!3;CL:0000627!5.31e-07!3;CL:0000682!5.31e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,6.26e-38,9;CL:0002251,6.26e-38,9;CL:0000239,1.30e-32,6;CL:0000677,1.30e-32,6;CL:0000584,1.30e-32,6;CL:0000075,6.51e-28,7;CL:0000066,1.72e-24,25;CL:0002076,1.96e-22,15;CL:0000223,1.32e-16,20;CL:0000682,5.67e-16,3;CL:0002250,4.27e-08,3;CL:0000473,3.78e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.66e-29!15;UBERON:0001242!8.62e-26!13;UBERON:0000060!8.62e-26!13;UBERON:0001262!8.62e-26!13;UBERON:0004786!8.62e-26!13;UBERON:0000160!6.88e-21!43;UBERON:0003350!9.26e-19!9;UBERON:0004808!9.26e-19!9;UBERON:0001277!9.26e-19!9;UBERON:0004923!7.78e-17!24;UBERON:0005409!4.63e-16!59;UBERON:0000485!5.99e-15!11;UBERON:0001007!4.66e-07!128;UBERON:0001555!4.66e-07!128;UBERON:0007026!4.66e-07!128;UBERON:0000331!7.59e-07!3;UBERON:0002116!7.59e-07!3;UBERON:0001204!7.59e-07!3;UBERON:0001168!7.59e-07!3;UBERON:0004119!7.77e-07!130;UBERON:0000925!7.77e-07!130;UBERON:0006595!7.77e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.02e-57,15;UBERON:0001242,5.21e-48,13;UBERON:0001262,5.21e-48,13;UBERON:0004786,5.21e-48,13;UBERON:0003350,6.26e-38,9;UBERON:0004808,6.26e-38,9;UBERON:0001277,6.26e-38,9;UBERON:0004923,1.76e-35,24;UBERON:0000485,6.83e-31,11;UBERON:0000160,6.38e-23,31;UBERON:0000331,1.45e-15,3;UBERON:0002116,1.45e-15,3;UBERON:0001204,1.45e-15,3;UBERON:0001168,1.45e-15,3;UBERON:0005409,1.47e-14,47;UBERON:0002108,7.98e-12,4;UBERON:0001962,3.42e-11,2;UBERON:0001961,3.42e-11,2;UBERON:0001744,3.42e-11,2;UBERON:0002465,9.44e-08,3;UBERON:0001007,6.11e-07,116;UBERON:0001555,6.11e-07,116;UBERON:0007026,6.11e-07,116;UBERON:0004119,8.71e-07,118;UBERON:0000925,8.71e-07,118;UBERON:0006595,8.71e-07,118 | |||
|phase1_expression=0,5.58360652222978,3.63999391511629,9.37639055051173,8.5152274090879,3.86122325397347,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,2.52350209173887,2.29692785646008,1.7230479846363,3.23206849028834,1.33016393619462,1.26015064879965,2.43903561720835,0,0,0,4.04392267651784,0.997407872150954,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0.898819408654221,0.216138049874694,1.1948476395262,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,5.58360652222978,3.63999391511629,9.37639055051173,8.5152274090879,3.86122325397347,3.50418960893289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23989391910769,2.52350209173887,2.29692785646008,1.7230479846363,3.23206849028834,1.33016393619462,1.26015064879965,2.43903561720835,0,0,0,4.04392267651784,0.997407872150954,2.85837098767317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0.239630249011841,0.599902730993408,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.284163499395593,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.264450566663544,0,0.232236671860439,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0.898819408654221,0.216138049874694,1.1948476395262,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:66635277..66635296,+ | |||
}} | }} |
Latest revision as of 01:27, 6 August 2015
Short description: | p@chr18:66635277..66635296, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:66635277..66635296, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 6.26e-38 | 9 |
epithelial cell of alimentary canal | 6.26e-38 | 9 |
brush border epithelial cell | 1.30e-32 | 6 |
gut absorptive cell | 1.30e-32 | 6 |
enterocyte | 1.30e-32 | 6 |
columnar/cuboidal epithelial cell | 6.51e-28 | 7 |
epithelial cell | 1.72e-24 | 25 |
endo-epithelial cell | 1.96e-22 | 15 |
endodermal cell | 1.32e-16 | 20 |
M cell of gut | 5.67e-16 | 3 |
intestinal crypt stem cell | 4.27e-08 | 3 |
defensive cell | 3.78e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.02e-57 | 15 |
intestinal mucosa | 5.21e-48 | 13 |
wall of intestine | 5.21e-48 | 13 |
gastrointestinal system mucosa | 5.21e-48 | 13 |
epithelium of mucosa | 6.26e-38 | 9 |
gastrointestinal system epithelium | 6.26e-38 | 9 |
intestinal epithelium | 6.26e-38 | 9 |
organ component layer | 1.76e-35 | 24 |
simple columnar epithelium | 6.83e-31 | 11 |
intestine | 6.38e-23 | 31 |
ileal mucosa | 1.45e-15 | 3 |
ileum | 1.45e-15 | 3 |
mucosa of small intestine | 1.45e-15 | 3 |
wall of small intestine | 1.45e-15 | 3 |
gastrointestinal system | 1.47e-14 | 47 |
small intestine | 7.98e-12 | 4 |
gut-associated lymphoid tissue | 3.42e-11 | 2 |
mucosa-associated lymphoid tissue | 3.42e-11 | 2 |
lymphoid tissue | 3.42e-11 | 2 |
lymphoid system | 9.44e-08 | 3 |
digestive system | 6.11e-07 | 116 |
digestive tract | 6.11e-07 | 116 |
primitive gut | 6.11e-07 | 116 |
endoderm-derived structure | 8.71e-07 | 118 |
endoderm | 8.71e-07 | 118 |
presumptive endoderm | 8.71e-07 | 118 |