FFCP PHASE1:Mm9::chr1:159388685..159388728,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr1:159388685..159388728,+ to FFCP PHASE1:Mm9::chr1:159388685..159388728,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=226527 | |EntrezGene=226527 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UNZ8 | |UniProt=Q3UNZ8 | ||
|association_with_transcript=0bp_to_ENSMUST00000046743,ENSMUST00000119891,NM_001033284,uc007ddj.1,uc007ddk.1_5end | |||
|cluster_id=chr1:159388685..159388728,+ | |||
|description=CAGE_peak_1_at_BC026585_5end | |||
|id=chr1:159388685..159388728,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!6.48e-13!85;UBERON:0005172!9.27e-12!49;UBERON:0005173!9.27e-12!49;UBERON:0002417!9.27e-12!49;UBERON:0000916!9.27e-12!49;UBERON:0003914!4.07e-11!47;UBERON:0002100!2.11e-10!98;UBERON:0009569!2.62e-10!66;UBERON:0000926!1.07e-09!193;UBERON:0004120!1.07e-09!193;UBERON:0006603!1.07e-09!193;UBERON:0003103!1.16e-07!43;UBERON:0000466!1.22e-07!79;UBERON:0002107!2.56e-07!22;UBERON:0007499!2.56e-07!22;UBERON:0006925!2.56e-07!22;UBERON:0009497!2.56e-07!22;UBERON:0000015!2.56e-07!22;UBERON:0002423!2.56e-07!22;UBERON:0006235!2.56e-07!22;UBERON:0008835!2.56e-07!22;UBERON:0003894!2.56e-07!22;UBERON:0004161!2.56e-07!22;UBERON:0008836!2.56e-07!22;UBERON:0000025!3.98e-07!114;UBERON:0002365!4.76e-07!25;UBERON:0002330!4.76e-07!25;UBERON:0007100!7.82e-07!18;UBERON:0000948!7.82e-07!18;UBERON:0005498!7.82e-07!18;UBERON:0004140!7.82e-07!18;UBERON:0009881!7.82e-07!18;UBERON:0004141!7.82e-07!18;UBERON:0003084!7.82e-07!18;UBERON:0007005!7.82e-07!18;UBERON:0004139!7.82e-07!18;UBERON:0004291!7.82e-07!18;UBERON:0004111!9.59e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.21e-12,79;UBERON:0005172,9.21e-12,49;UBERON:0005173,9.21e-12,49;UBERON:0002417,9.21e-12,49;UBERON:0000916,9.21e-12,49;UBERON:0003914,4.04e-11,47;UBERON:0009569,2.60e-10,66;UBERON:0003104,1.77e-09,61;UBERON:0009142,1.77e-09,61;UBERON:0002100,1.84e-09,90;UBERON:0003103,1.15e-07,43;UBERON:0002107,2.55e-07,22;UBERON:0007499,2.55e-07,22;UBERON:0006925,2.55e-07,22;UBERON:0009497,2.55e-07,22;UBERON:0000015,2.55e-07,22;UBERON:0002423,2.55e-07,22;UBERON:0006235,2.55e-07,22;UBERON:0008835,2.55e-07,22;UBERON:0003894,2.55e-07,22;UBERON:0004161,2.55e-07,22;UBERON:0008836,2.55e-07,22;UBERON:0000025,3.97e-07,114;UBERON:0002365,4.74e-07,25;UBERON:0002330,4.74e-07,25;UBERON:0007100,7.79e-07,18;UBERON:0000948,7.79e-07,18;UBERON:0005498,7.79e-07,18;UBERON:0004140,7.79e-07,18;UBERON:0009881,7.79e-07,18;UBERON:0004141,7.79e-07,18;UBERON:0003084,7.79e-07,18;UBERON:0007005,7.79e-07,18;UBERON:0004139,7.79e-07,18;UBERON:0004291,7.79e-07,18 | |||
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| ||
|short_description=p1@BC026585 | |||
}} | }} |
Latest revision as of 15:15, 26 September 2015
Short description: | p1@BC026585 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_BC026585_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 0bp_to_ENSMUST00000046743, ENSMUST00000119891, NM_001033284, uc007ddj.1, uc007ddk.1_5end |
EntrezGene: | BC026585 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.21e-12 | 79 |
abdomen element | 9.21e-12 | 49 |
abdominal segment element | 9.21e-12 | 49 |
abdominal segment of trunk | 9.21e-12 | 49 |
abdomen | 9.21e-12 | 49 |
epithelial tube | 4.04e-11 | 47 |
subdivision of trunk | 2.60e-10 | 66 |
mesenchyme | 1.77e-09 | 61 |
entire embryonic mesenchyme | 1.77e-09 | 61 |
trunk | 1.84e-09 | 90 |
compound organ | 1.15e-07 | 43 |
liver | 2.55e-07 | 22 |
epithelial sac | 2.55e-07 | 22 |
digestive gland | 2.55e-07 | 22 |
epithelium of foregut-midgut junction | 2.55e-07 | 22 |
anatomical boundary | 2.55e-07 | 22 |
hepatobiliary system | 2.55e-07 | 22 |
foregut-midgut junction | 2.55e-07 | 22 |
hepatic diverticulum | 2.55e-07 | 22 |
liver primordium | 2.55e-07 | 22 |
septum transversum | 2.55e-07 | 22 |
liver bud | 2.55e-07 | 22 |
tube | 3.97e-07 | 114 |
exocrine gland | 4.74e-07 | 25 |
exocrine system | 4.74e-07 | 25 |
primary circulatory organ | 7.79e-07 | 18 |
heart | 7.79e-07 | 18 |
primitive heart tube | 7.79e-07 | 18 |
primary heart field | 7.79e-07 | 18 |
anterior lateral plate mesoderm | 7.79e-07 | 18 |
heart tube | 7.79e-07 | 18 |
heart primordium | 7.79e-07 | 18 |
cardiac mesoderm | 7.79e-07 | 18 |
cardiogenic plate | 7.79e-07 | 18 |
heart rudiment | 7.79e-07 | 18 |