FFCP PHASE1:Mm9::chr2:26771843..26771885,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:26771843..26771885,- to FFCP PHASE1:Mm9::chr2:26771843..26771885,-: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20930 | |EntrezGene=20930 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9Q5F2 | |UniProt=E9Q5F2 | ||
|association_with_transcript=0bp_to_ENSMUST00000129682,ENSMUST00000133513,ENSMUST00000147110,ENSMUST00000169815_5end | |||
|cluster_id=chr2:26771843..26771885,- | |||
|description=CAGE_peak_1_at_Surf1_5end | |||
|id=chr2:26771843..26771885,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.64e-12!50;UBERON:0006238!1.64e-12!50;UBERON:0001049!3.90e-12!52;UBERON:0005068!3.90e-12!52;UBERON:0006241!3.90e-12!52;UBERON:0007135!3.90e-12!52;UBERON:0002616!4.86e-12!49;UBERON:0007023!4.53e-11!51;UBERON:0004111!5.73e-10!122;UBERON:0000033!5.78e-10!63;UBERON:0002346!2.10e-09!71;UBERON:0003075!2.10e-09!71;UBERON:0007284!2.10e-09!71;UBERON:0000025!4.75e-09!114;UBERON:0002020!9.15e-09!34;UBERON:0001017!1.10e-08!73;UBERON:0005743!1.10e-08!73;UBERON:0003080!2.53e-08!40;UBERON:0000073!3.20e-08!75;UBERON:0001016!3.20e-08!75;UBERON:0000477!3.52e-08!154;UBERON:0002780!8.68e-08!39;UBERON:0001890!8.68e-08!39;UBERON:0006240!8.68e-08!39;UBERON:0000119!9.64e-08!183;UBERON:0002791!1.00e-07!29;UBERON:0003528!1.00e-07!29;UBERON:0001893!1.00e-07!29;UBERON:0000480!1.88e-07!308;UBERON:0000467!1.88e-07!308;UBERON:0000483!1.89e-07!181;UBERON:0007811!5.80e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.41e-13,54;UBERON:0001049,3.90e-12,52;UBERON:0005068,3.90e-12,52;UBERON:0006241,3.90e-12,52;UBERON:0007135,3.90e-12,52;UBERON:0007023,4.53e-11,51;UBERON:0000955,6.80e-11,47;UBERON:0006238,6.80e-11,47;UBERON:0002616,1.93e-10,46;UBERON:0004111,5.73e-10,122;UBERON:0000025,4.75e-09,114;UBERON:0002020,9.15e-09,34;UBERON:0001017,1.10e-08,73;UBERON:0002346,2.19e-08,64;UBERON:0003075,2.19e-08,64;UBERON:0007284,2.19e-08,64;UBERON:0003080,2.53e-08,40;UBERON:0001016,3.20e-08,75;UBERON:0002780,8.68e-08,39;UBERON:0001890,8.68e-08,39;UBERON:0006240,8.68e-08,39;UBERON:0003528,1.00e-07,29;UBERON:0002791,1.00e-07,29;UBERON:0001893,1.00e-07,29;UBERON:0010314,9.29e-07,92 | |||
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|phase1_expression=34.9124486688451,26.8711063882308,30.9399482784885,27.2217790176147,17.5313505481222,27.1964420497261,30.6032559180139,49.5833562015653,21.2590970449017,19.4273556847255,26.0251311702768,25.7664073554937,35.0961496358972,44.1473032215937,27.3150004688843,27.7391116324062,20.9868563438444,42.2719301580038,43.1910465858077,40.7414065726109,37.2489610861686,42.7943999675816,34.2171723772005,36.1582875513099,49.7818139915759,43.0673973086265,40.491627638953,43.3097177698637,54.9167682228921,41.5849714103886,52.3284005146519,23.4961349180064,19.0670084151217,0,48.2382204984629,57.1847180033214,51.0423390655923,56.0832385187456,56.2561448057136,50.2582794214846,55.8819913629464,65.5723665560108,64.5728769531434,79.0632016886625,76.843713864392,57.4501334266063,58.6793508261029,28.5612954858385,53.1640562217422,50.5517737593137,35.4165646712167,40.250718022192,26.6774343631801,30.4652099644765,23.19047214083,27.5267596558463,34.9570796725283,48.988848766357,32.9775831201144,43.9062512795787,31.691570175309,33.5456086748441,47.1326241938904,44.5450360054292,56.3653826663175,59.6803296554724,32.9560121570245,34.9638657842615,26.7519199755872,28.351247049655,29.4454945891935,50.5602242394732,61.4014543845486,34.4199145794021,29.5204050736168,40.4456266108409,68.271846219621,70.1003486087681,74.1919555627656,39.1702274558676,36.3205945101566,42.1939830150976,94.9222196604695,109.738708956178,80.9830713217094,39.1856018679978,41.5725307933381,36.5342913817589,31.5778226199377,23.1248973926764,27.2472619379577,54.2067042498273,45.5580793584193,88.511323428602,81.2220521809586,80.1968127904231,38.2008822758365,48.9135025799026,46.7614808285164,41.3407302177098,31.5489260299764,34.6481489018658,22.9324715735981,7.11066703153331,23.5975234702223,27.1095056058356,20.2209778005913,49.555803798072,46.3498811728437,54.4782650367907,27.7576522825817,36.8403228757691,41.5107895060905,45.3675148063394,40.215337840411,48.6329708445844,50.922163353281,53.0679639896076,28.307537662396,20.544389943321,16.5631138845295,28.6076399349781,55.9175283654366,59.1417209963325,57.3883976668867,42.1504141094176,30.6726718735156,31.1949420116572,29.8615033621702,86.2794082971779,71.3700940397057,36.3141077606178,71.4417955990256,48.8416523500931,82.2840656455858,64.4097814378998,30.0426123358433,33.5898820647251,63.686135125286,44.1927897361595,23.0313184043986,30.3470777852184,21.0672691872259,26.5240479390859,26.2620886724126,29.9786105466548,28.1105173679186,45.5317932500668,15.3053274982318,23.6382600209774,21.6419882721657,24.9883134967435,26.4144886764318,23.6811473235073,30.4557561883756,23.6850777514007,28.0885274925294,25.9921386185862,28.9846769383505,22.1624576612987,21.1073453982987,27.3694333420743,23.4377288229358,27.7437566763839,26.9967447552912,25.5787339225449,24.1446061259657,28.6075088799565,25.013097186849,35.4601722410846,30.1575971510583,42.5441963407717,34.2498179854039,40.1277192093512,68.3442332833414,28.9161960785789,45.2673732687803,39.4031344328681,23.0351310578053,20.669063795579,21.7786009634338,29.0424275457613,37.1371333220933,44.1323452581137,39.860441169739,40.5159428621067,45.7430080016491,48.1474662339585,43.0870632533256,34.1551375288604,43.2276099749388,51.5775897728811,24.0878234210414,19.0795016058247,20.2873924211545,26.2710212920455,25.407775818959,24.3371295019405,26.8122917406851,42.8069429140846,44.1166425234263,50.3460428800946,72.9273462634386,23.1914696945371,19.4593405162071,25.6342808118733,22.1117532313468,28.7000820105376,35.1383675458359,26.1803485080238,26.9144476446559,39.5368434990837,27.3159592401974,47.2619003538999,49.3019523521006,53.0415643688935,50.7694680267011,60.7878836917843,45.818791161318,23.4969350595401,14.1779529504563,18.6719594352707,22.2955735874077,21.4408009525524,24.9945822930314,25.172240573656,29.1625016596453,28.7904096543407,27.7451297464028,43.0960517702391,40.7536557203514,43.828664750198,45.2373851817817,41.3368319702219,22.1293922858566,32.2845993176537,90.8716339330903,69.5065301491765,26.0656563148914,36.3558135174297,21.7700671397217,23.4263246577983,24.3428439438063,17.9226598464414,23.171062104569,18.3999745012741,19.8357243820698,22.2114452012597,19.7643888973262,57.5165156395035,29.5235377233199,31.3395462454369,27.8536700494615,40.7476203742163,22.5666735177937,28.8908957024428,26.6044730128981,34.1375194358176,26.2818684663888,23.6725063916824,33.0788215255323,30.5368332761105,31.7282666762402,28.4433082142234,30.5713964867496,25.7838858120467,48.0019844112841,23.227881130039,34.4094098862127,27.0064664139806,27.842416681837,31.5712807155665,33.4034511822306,49.6277867056797,28.6299483837727,51.8988573616359,78.5081097075664,29.6795255294664,27.1260236849121,20.0842040010759,21.1289048885552,20.3534715683876,33.228815375803,80.8454316765822,31.9528547091985,26.004745363366,30.9274860707418,27.5017947226849,23.9214898511794,31.5713879025001,19.5475194492934,22.3922323717853,20.868196044468,56.3255664628917,16.9239756565907,21.7551829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| ||
|short_description=p1@Surf1 | |||
}} | }} |
Latest revision as of 11:19, 26 September 2015
Short description: | p1@Surf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Surf1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000129682, ENSMUST00000133513, ENSMUST00000147110, ENSMUST00000169815_5end |
EntrezGene: | Surf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 3.41e-13 | 54 |
neural tube | 3.90e-12 | 52 |
neural rod | 3.90e-12 | 52 |
future spinal cord | 3.90e-12 | 52 |
neural keel | 3.90e-12 | 52 |
adult organism | 4.53e-11 | 51 |
brain | 6.80e-11 | 47 |
future brain | 6.80e-11 | 47 |
regional part of brain | 1.93e-10 | 46 |
anatomical conduit | 5.73e-10 | 122 |
tube | 4.75e-09 | 114 |
gray matter | 9.15e-09 | 34 |
central nervous system | 1.10e-08 | 73 |
neurectoderm | 2.19e-08 | 64 |
neural plate | 2.19e-08 | 64 |
presumptive neural plate | 2.19e-08 | 64 |
anterior neural tube | 2.53e-08 | 40 |
nervous system | 3.20e-08 | 75 |
regional part of forebrain | 8.68e-08 | 39 |
forebrain | 8.68e-08 | 39 |
future forebrain | 8.68e-08 | 39 |
brain grey matter | 1.00e-07 | 29 |
regional part of telencephalon | 1.00e-07 | 29 |
telencephalon | 1.00e-07 | 29 |
structure with developmental contribution from neural crest | 9.29e-07 | 92 |