FFCP PHASE1:Mm9::chr2:31526234..31526261,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:31526234..31526261,+ to FFCP PHASE1:Mm9::chr2:31526234..31526261,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=227715 | |EntrezGene=227715 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=268 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VBV3,A2AV19,Q3TKQ3 | |UniProt=Q8VBV3,A2AV19,Q3TKQ3 | ||
|association_with_transcript=0bp_to_ENSMUST00000038474,ENSMUST00000137156,ENSMUST00000149094,NM_144886,uc008jdy.1_5end | |||
|cluster_id=chr2:31526234..31526261,+ | |||
|description=CAGE_peak_1_at_Exosc2_5end | |||
|id=chr2:31526234..31526261,+ | |||
|ontology_enrichment_celltype=CL:0000988!8.38e-08!32;CL:0002032!8.38e-08!32;CL:0000037!8.38e-08!32;CL:0000566!8.38e-08!32;CL:0000837!8.38e-08!32;CL:0000542!2.77e-07!13;CL:0000051!2.77e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.24e-08,32;CL:0002032,8.24e-08,32;CL:0000037,8.24e-08,32;CL:0000837,8.24e-08,32;CL:0000542,2.77e-07,13;CL:0000051,2.77e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.03e-09!29;UBERON:0002370!4.06e-08!23;UBERON:0000974!4.06e-08!23;UBERON:0004807!4.06e-08!23;UBERON:0005058!4.06e-08!23;UBERON:0003351!4.06e-08!23;UBERON:0009113!4.06e-08!23;UBERON:0003295!4.06e-08!23;UBERON:0009722!4.06e-08!23;UBERON:0005562!4.06e-08!23;UBERON:0007690!4.06e-08!23;UBERON:0002390!2.27e-07!45;UBERON:0003061!2.27e-07!45;UBERON:0000072!3.26e-07!27;UBERON:0003408!3.34e-07!24;UBERON:0002193!3.88e-07!48;UBERON:0006562!4.05e-07!24;UBERON:0001557!4.05e-07!24;UBERON:0001042!4.05e-07!24;UBERON:0008814!4.05e-07!24;UBERON:0009145!4.05e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.01e-09,29;UBERON:0005057,1.01e-09,29;UBERON:0000153,2.34e-08,43;UBERON:0002370,3.97e-08,23;UBERON:0000974,3.97e-08,23;UBERON:0004807,3.97e-08,23;UBERON:0005058,3.97e-08,23;UBERON:0003351,3.97e-08,23;UBERON:0009113,3.97e-08,23;UBERON:0003295,3.97e-08,23;UBERON:0009722,3.97e-08,23;UBERON:0005562,3.97e-08,23;UBERON:0007690,3.97e-08,23;UBERON:0002390,2.24e-07,45;UBERON:0003061,2.24e-07,45;UBERON:0000072,3.20e-07,27;UBERON:0003408,3.28e-07,24;UBERON:0007811,3.72e-07,36;UBERON:0002193,3.82e-07,48;UBERON:0002405,3.82e-07,48;UBERON:0006562,3.98e-07,24;UBERON:0001557,3.98e-07,24;UBERON:0001042,3.98e-07,24;UBERON:0008814,3.98e-07,24;UBERON:0009145,3.98e-07,24 | |||
|phase1_expression=12.6517589212787,0.697950815278722,2.27499619694768,0.90739263392049,0.500895729946347,9.06548068324205,12.8486952327539,8.90950931746876,33.6485045942484,24.5767752638093,35.4421194226795,30.3931925772232,11.9840510951844,11.2772319120507,14.6568295198892,15.9955461237963,20.9868563438444,10.0947892914636,11.6547268564878,7.21462408056651,7.99406927420056,23.2340825810072,21.1571829202538,9.11956809922418,11.2410547722913,1.72269589234506,3.01533397311352,7.11055067863434,9.12112413390595,8.56902441183765,12.1951780860418,27.9413496322238,24.6025915033828,0,19.3530585233354,17.2884031172832,16.3335485009895,2.92972141515835,2.3440060335714,3.14114246384279,2.94115744015507,1.36609096991689,0.971020706062307,6.04304726282771,5.37297735463427,4.40512205188036,4.69434806608824,6.32272953503295,6.15121311656521,5.24960727500565,6.29938897314131,1.43752564364972,17.9527388481778,18.1340535502836,21.1739093459752,9.00408026125814,5.44413535883638,3.6097046459421,8.09265843438391,8.46385566835253,9.50747105259269,7.11573517345177,7.11435836888911,4.04954872776629,3.9554654502679,2.8419204597844,5.09320187881288,5.76327457982332,10.4726508431562,10.9354810048669,7.36137364729837,5.42736870367227,7.06779331045163,11.7591167246356,12.9391385874619,18.3843757322004,8.8092704799511,6.51205424234457,7.37311359629969,8.5726087024626,12.7167824607349,11.4600941522487,7.2587579740359,7.87867654044352,6.57032465440283,10.0173719061047,8.39992916714707,11.9295645328192,14.6151553133045,6.49915416918356,2.31891590961342,4.30211938490693,6.79971333707751,8.09554787456726,6.49776417447669,8.06448396775204,5.89866564553358,10.0553890321054,11.1707981979234,9.89350808628953,11.9716906810178,12.8326477414318,10.1922095882658,0,9.30911476348221,12.4146334082798,10.6160133453104,6.96521666286266,7.25026074212081,6.08612770165782,14.052311468057,7.00270600117925,7.37969591219387,12.5099791658677,7.52567725668511,7.03732911446183,4.44950941921873,5.06097749219691,14.153768831198,7.44127509758082,9.05450225687614,10.6672555689749,1.86391761218122,7.02673912827713,8.79676168616511,7.91916871146633,12.9400334466394,14.9975682748352,17.0274104277907,6.5907881338122,5.49000723382352,11.9371634507221,4.34560800480691,5.37002460393694,5.81806524766768,7.62533936418461,6.82323737797119,8.08645308965605,6.06534620240819,6.31325567659422,17.4361393570023,16.3230494147766,13.6847218652065,11.0014517020072,10.8178033650611,12.5551445879153,10.9631017734883,6.20888089773638,22.8502072508813,17.3977593754394,11.4368230706567,14.2477226077924,11.1218899690239,8.358051996532,9.05441400194951,14.131432944113,21.066395619397,17.4996576838006,18.4706274607135,12.4275463521301,15.4787199587523,13.6847166710371,12.3107262504309,10.0349758191176,7.71335564436891,8.37122201101468,5.90201483079162,6.30532848782715,6.08871444679878,6.895033491322,4.78305976320549,3.65499968563331,5.26920276698522,3.75777972529041,6.09840850835969,7.51203670368776,2.31293148088659,7.93351699990633,18.7693660471006,18.3466970769746,14.5620231293965,11.6976444281539,8.89512175379481,9.3210556795154,9.49058123089023,8.39964669092456,6.53471542880701,7.36138946552258,7.40863531052657,5.39291645192533,8.86166004486246,6.57166201739412,16.311439481965,14.3953125888258,18.0332377076929,12.8300336542548,11.2492442557223,8.90724912607046,7.33543830641385,6.4948465111025,8.32093257559286,6.29325536001183,8.30067355844017,17.685581205906,20.0490175015467,22.4862112384854,13.1859078902527,13.7470981058878,10.1850340712568,7.19240343627027,7.94462611197673,10.7078951143352,10.0637744569148,8.18710084870708,9.98520553966594,10.3557339958316,6.45830688678884,5.78932225636041,6.09685527549795,20.2755810594419,15.3187077855504,15.2770577197669,12.4385831592906,10.7204004762762,4.04674189506223,4.87834119644497,7.09358148477859,8.19419351700467,5.74037167166954,6.06294264448231,7.08008425650172,5.06271705035291,9.04747703635634,4.89515115436839,4.91764273019036,8.00216564283724,6.58257418949947,6.68106613575558,9.3442918864705,7.06918596172244,13.566853434899,13.6653560503823,10.3403230911743,14.3381278771531,11.3627323782021,9.34152551603147,10.1202675418724,11.3979784585412,10.6727700045561,9.63963949265421,8.09058485687131,11.0400674273698,7.32991317091092,5.93892442701128,6.63725691699814,16.2663026223838,18.4417369748498,9.8074641473067,10.0402643579463,9.83792473420568,8.5281336745513,10.9060118843252,10.6949213515416,12.009396801561,5.27093042874994,7.21948802737308,7.14923172082955,18.006109403131,11.5129228566652,10.2881776815164,6.7389288784064,9.81028496811388,7.24015690649332,8.22055362609418,8.21350978222986,4.02480934641258,5.51320995137405,8.73897140589844,7.10443477461984,10.9769523369244,10.3853939282729,9.19189038572343,8.74442509889552,6.48988557036784,12.1318325366475,11.9704383418669,15.5563402990558,16.1996873024034,11.7557035840082,13.7266903923914,13.0883391095269,14.8348539463077,15.0637971446822,5.72802370809068,18.1893196309153,13.0124458961183,12.3126088536853,10.8725913927524,6.76923947613151,7.55240339754996,7.27350410382956,6.28214260761671,6.73997861117323,4.97071450469541,7.89170114157866,14.353588420222,13.2366792365678,11.2781689239548,13.5617814651618,10.9821481569006,10.0927225235348,12.1090077904874,8.91304427618542,11.1128695579963,6.91272015018877,9.16432249821717,18.8534450219853,18.1798394181744,18.0589943939135,17.0075360884107,16.0931897372825,18.9908810241551,17.131985152251,16.7604306913925,16.61308385079,15.1239277705261,13.1568138998666,14.5279880876897,10.8695519028859,3.40095575422817,23.3085251042768,24.0433135713395,16.4526924036797,6.18206700903009,7.3196165425961,7.8755198434924,6.85978813053011,5.01572104035363,9.60078132449013,4.60325236507177,3.43737308063638,6.8741272937475,2.74033007908257,7.55393897389701,4.72515750162264,5.85417564191487,6.79713613476307,5.69536342927002,17.4362743941417,10.7736715818278,11.7806187970353,10.9398022680732,12.157563432423,6.61836630420051,6.88964856185007,7.62329711783909,7.38114182061175,6.06473308233114,8.87177549615839,8.29955902098735,8.70866019469906,8.70742072706222,7.98353018483024,6.66811167796303,9.27074607558844,10.2241886845764,10.714233420886,10.009526569139,6.51451579532289,9.05126611412621,6.91464950847231,8.43009216467505,8.56395361779509,9.81529451543447,8.96347067076586,8.94437018888666,9.50628796921032,5.61142271657738,8.18581625056802,7.09232273104057,10.6400071224119,7.59190521811233,6.75173138433995,10.4920442733937,9.12333272937093,6.23126056740065,7.26895661861605,6.61774257358547,7.88350641109433 | |phase1_expression=12.6517589212787,0.697950815278722,2.27499619694768,0.90739263392049,0.500895729946347,9.06548068324205,12.8486952327539,8.90950931746876,33.6485045942484,24.5767752638093,35.4421194226795,30.3931925772232,11.9840510951844,11.2772319120507,14.6568295198892,15.9955461237963,20.9868563438444,10.0947892914636,11.6547268564878,7.21462408056651,7.99406927420056,23.2340825810072,21.1571829202538,9.11956809922418,11.2410547722913,1.72269589234506,3.01533397311352,7.11055067863434,9.12112413390595,8.56902441183765,12.1951780860418,27.9413496322238,24.6025915033828,0,19.3530585233354,17.2884031172832,16.3335485009895,2.92972141515835,2.3440060335714,3.14114246384279,2.94115744015507,1.36609096991689,0.971020706062307,6.04304726282771,5.37297735463427,4.40512205188036,4.69434806608824,6.32272953503295,6.15121311656521,5.24960727500565,6.29938897314131,1.43752564364972,17.9527388481778,18.1340535502836,21.1739093459752,9.00408026125814,5.44413535883638,3.6097046459421,8.09265843438391,8.46385566835253,9.50747105259269,7.11573517345177,7.11435836888911,4.04954872776629,3.9554654502679,2.8419204597844,5.09320187881288,5.76327457982332,10.4726508431562,10.9354810048669,7.36137364729837,5.42736870367227,7.06779331045163,11.7591167246356,12.9391385874619,18.3843757322004,8.8092704799511,6.51205424234457,7.37311359629969,8.5726087024626,12.7167824607349,11.4600941522487,7.2587579740359,7.87867654044352,6.57032465440283,10.0173719061047,8.39992916714707,11.9295645328192,14.6151553133045,6.49915416918356,2.31891590961342,4.30211938490693,6.79971333707751,8.09554787456726,6.49776417447669,8.06448396775204,5.89866564553358,10.0553890321054,11.1707981979234,9.89350808628953,11.9716906810178,12.8326477414318,10.1922095882658,0,9.30911476348221,12.4146334082798,10.6160133453104,6.96521666286266,7.25026074212081,6.08612770165782,14.052311468057,7.00270600117925,7.37969591219387,12.5099791658677,7.52567725668511,7.03732911446183,4.44950941921873,5.06097749219691,14.153768831198,7.44127509758082,9.05450225687614,10.6672555689749,1.86391761218122,7.02673912827713,8.79676168616511,7.91916871146633,12.9400334466394,14.9975682748352,17.0274104277907,6.5907881338122,5.49000723382352,11.9371634507221,4.34560800480691,5.37002460393694,5.81806524766768,7.62533936418461,6.82323737797119,8.08645308965605,6.06534620240819,6.31325567659422,17.4361393570023,16.3230494147766,13.6847218652065,11.0014517020072,10.8178033650611,12.5551445879153,10.9631017734883,6.20888089773638,22.8502072508813,17.3977593754394,11.4368230706567,14.2477226077924,11.1218899690239,8.358051996532,9.05441400194951,14.131432944113,21.066395619397,17.4996576838006,18.4706274607135,12.4275463521301,15.4787199587523,13.6847166710371,12.3107262504309,10.0349758191176,7.71335564436891,8.37122201101468,5.90201483079162,6.30532848782715,6.08871444679878,6.895033491322,4.78305976320549,3.65499968563331,5.26920276698522,3.75777972529041,6.09840850835969,7.51203670368776,2.31293148088659,7.93351699990633,18.7693660471006,18.3466970769746,14.5620231293965,11.6976444281539,8.89512175379481,9.3210556795154,9.49058123089023,8.39964669092456,6.53471542880701,7.36138946552258,7.40863531052657,5.39291645192533,8.86166004486246,6.57166201739412,16.311439481965,14.3953125888258,18.0332377076929,12.8300336542548,11.2492442557223,8.90724912607046,7.33543830641385,6.4948465111025,8.32093257559286,6.29325536001183,8.30067355844017,17.685581205906,20.0490175015467,22.4862112384854,13.1859078902527,13.7470981058878,10.1850340712568,7.19240343627027,7.94462611197673,10.7078951143352,10.0637744569148,8.18710084870708,9.98520553966594,10.3557339958316,6.45830688678884,5.78932225636041,6.09685527549795,20.2755810594419,15.3187077855504,15.2770577197669,12.4385831592906,10.7204004762762,4.04674189506223,4.87834119644497,7.09358148477859,8.19419351700467,5.74037167166954,6.06294264448231,7.08008425650172,5.06271705035291,9.04747703635634,4.89515115436839,4.91764273019036,8.00216564283724,6.58257418949947,6.68106613575558,9.3442918864705,7.06918596172244,13.566853434899,13.6653560503823,10.3403230911743,14.3381278771531,11.3627323782021,9.34152551603147,10.1202675418724,11.3979784585412,10.6727700045561,9.63963949265421,8.09058485687131,11.0400674273698,7.32991317091092,5.93892442701128,6.63725691699814,16.2663026223838,18.4417369748498,9.8074641473067,10.0402643579463,9.83792473420568,8.5281336745513,10.9060118843252,10.6949213515416,12.009396801561,5.27093042874994,7.21948802737308,7.14923172082955,18.006109403131,11.5129228566652,10.2881776815164,6.7389288784064,9.81028496811388,7.24015690649332,8.22055362609418,8.21350978222986,4.02480934641258,5.51320995137405,8.73897140589844,7.10443477461984,10.9769523369244,10.3853939282729,9.19189038572343,8.74442509889552,6.48988557036784,12.1318325366475,11.9704383418669,15.5563402990558,16.1996873024034,11.7557035840082,13.7266903923914,13.0883391095269,14.8348539463077,15.0637971446822,5.72802370809068,18.1893196309153,13.0124458961183,12.3126088536853,10.8725913927524,6.76923947613151,7.55240339754996,7.27350410382956,6.28214260761671,6.73997861117323,4.97071450469541,7.89170114157866,14.353588420222,13.2366792365678,11.2781689239548,13.5617814651618,10.9821481569006,10.0927225235348,12.1090077904874,8.91304427618542,11.1128695579963,6.91272015018877,9.16432249821717,18.8534450219853,18.1798394181744,18.0589943939135,17.0075360884107,16.0931897372825,18.9908810241551,17.131985152251,16.7604306913925,16.61308385079,15.1239277705261,13.1568138998666,14.5279880876897,10.8695519028859,3.40095575422817,23.3085251042768,24.0433135713395,16.4526924036797,6.18206700903009,7.3196165425961,7.8755198434924,6.85978813053011,5.01572104035363,9.60078132449013,4.60325236507177,3.43737308063638,6.8741272937475,2.74033007908257,7.55393897389701,4.72515750162264,5.85417564191487,6.79713613476307,5.69536342927002,17.4362743941417,10.7736715818278,11.7806187970353,10.9398022680732,12.157563432423,6.61836630420051,6.88964856185007,7.62329711783909,7.38114182061175,6.06473308233114,8.87177549615839,8.29955902098735,8.70866019469906,8.70742072706222,7.98353018483024,6.66811167796303,9.27074607558844,10.2241886845764,10.714233420886,10.009526569139,6.51451579532289,9.05126611412621,6.91464950847231,8.43009216467505,8.56395361779509,9.81529451543447,8.96347067076586,8.94437018888666,9.50628796921032,5.61142271657738,8.18581625056802,7.09232273104057,10.6400071224119,7.59190521811233,6.75173138433995,10.4920442733937,9.12333272937093,6.23126056740065,7.26895661861605,6.61774257358547,7.88350641109433 | ||
|short_description=p1@Exosc2 | |||
}} | }} |
Latest revision as of 13:46, 26 September 2015
Short description: | p1@Exosc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Exosc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:268 |
Association with transcript: | 0bp_to_ENSMUST00000038474, ENSMUST00000137156, ENSMUST00000149094, NM_144886, uc008jdy.1_5end |
EntrezGene: | Exosc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.24e-08 | 32 |
hematopoietic oligopotent progenitor cell | 8.24e-08 | 32 |
hematopoietic stem cell | 8.24e-08 | 32 |
hematopoietic multipotent progenitor cell | 8.24e-08 | 32 |
lymphocyte | 2.77e-07 | 13 |
common lymphoid progenitor | 2.77e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 1.01e-09 | 29 |
immune organ | 1.01e-09 | 29 |
anterior region of body | 2.34e-08 | 43 |
thymus | 3.97e-08 | 23 |
neck | 3.97e-08 | 23 |
respiratory system epithelium | 3.97e-08 | 23 |
hemolymphoid system gland | 3.97e-08 | 23 |
pharyngeal epithelium | 3.97e-08 | 23 |
thymic region | 3.97e-08 | 23 |
pharyngeal gland | 3.97e-08 | 23 |
entire pharyngeal arch endoderm | 3.97e-08 | 23 |
thymus primordium | 3.97e-08 | 23 |
early pharyngeal endoderm | 3.97e-08 | 23 |
hematopoietic system | 2.24e-07 | 45 |
blood island | 2.24e-07 | 45 |
segment of respiratory tract | 3.20e-07 | 27 |
gland of gut | 3.28e-07 | 24 |
craniocervical region | 3.72e-07 | 36 |
hemolymphoid system | 3.82e-07 | 48 |
immune system | 3.82e-07 | 48 |
pharynx | 3.98e-07 | 24 |
upper respiratory tract | 3.98e-07 | 24 |
chordate pharynx | 3.98e-07 | 24 |
pharyngeal arch system | 3.98e-07 | 24 |
pharyngeal region of foregut | 3.98e-07 | 24 |