FFCP PHASE1:Mm9::chr2:6243832..6243906,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:6243832..6243906,+ to FFCP PHASE1:Mm9::chr2:6243832..6243906,+: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=98910 | |EntrezGene=98910 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=14bp_to_ENSMUST00000132391_5end | |||
|cluster_id=chr2:6243832..6243906,+ | |||
|description=CAGE_peak_1_at_Usp6nl_5end | |||
|id=chr2:6243832..6243906,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.48e-07!25;CL:0000223!9.95e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.48e-07,25;CL:0000223,9.95e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!4.70e-18!130;UBERON:0000925!4.70e-18!130;UBERON:0006595!4.70e-18!130;UBERON:0001007!2.00e-17!128;UBERON:0001555!2.00e-17!128;UBERON:0007026!2.00e-17!128;UBERON:0005409!7.77e-17!59;UBERON:0004921!1.09e-16!126;UBERON:0004185!1.09e-16!126;UBERON:0000160!2.92e-12!43;UBERON:0004923!3.28e-10!24;UBERON:0009569!3.27e-09!66;UBERON:0005177!6.85e-09!85;UBERON:0000077!1.01e-07!97;UBERON:0000344!1.74e-07!15;UBERON:0000466!2.25e-07!79;UBERON:0001041!3.02e-07!92;UBERON:0001242!6.30e-07!13;UBERON:0000060!6.30e-07!13;UBERON:0001262!6.30e-07!13;UBERON:0004786!6.30e-07!13;UBERON:0005178!6.69e-07!17;UBERON:0005181!6.69e-07!17;UBERON:0002224!6.69e-07!17;UBERON:0000915!6.69e-07!17;UBERON:0008947!6.69e-07!17;UBERON:0003258!6.69e-07!17;UBERON:0003104!8.94e-07!131;UBERON:0009142!8.94e-07!131 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.54e-15,118;UBERON:0000925,3.54e-15,118;UBERON:0006595,3.54e-15,118;UBERON:0005409,1.08e-14,47;UBERON:0001007,1.33e-14,116;UBERON:0001555,1.33e-14,116;UBERON:0007026,1.33e-14,116;UBERON:0004921,6.27e-14,114;UBERON:0005177,1.70e-11,79;UBERON:0000160,2.26e-10,31;UBERON:0004923,3.28e-10,24;UBERON:0009569,3.27e-09,66;UBERON:0002100,3.26e-08,90;UBERON:0000344,1.74e-07,15;UBERON:0001242,6.30e-07,13;UBERON:0001262,6.30e-07,13;UBERON:0004786,6.30e-07,13;UBERON:0005178,6.69e-07,17;UBERON:0005181,6.69e-07,17;UBERON:0002224,6.69e-07,17;UBERON:0000915,6.69e-07,17;UBERON:0008947,6.69e-07,17;UBERON:0003258,6.69e-07,17 | |||
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|phase1_expression=6.40595388419176,15.3549179361319,14.1049764210756,21.1724947914781,29.0519523368881,17.2915650069246,14.2503710763271,7.23090611272827,11.1223090499817,11.2350972634557,1.19852577757853,1.03703806693937,2.39681021903688,2.97229368224591,12.3250611871795,11.7435655086099,11.8925519281785,6.94016763788123,9.04955261797876,14.429248161133,6.63337663178344,3.17731043842833,2.35079810225042,13.759348360233,12.15869189656,17.8011908875656,12.4920978886132,10.1271479362368,15.5819203954227,13.6096270070363,11.0865255327652,6.35030673459631,3.69038872550742,0,12.9983228888074,14.1299448554718,11.8418226632174,0,0,1.57057123192139,1.17646297606203,1.36609096991689,0.485510353031154,5.03587271902309,5.17022349219524,5.68994931701213,3.12956537739216,6.32272953503295,7.46933021297204,11.2769341463084,8.25919887589639,15.8127820801469,10.5703041816374,4.35217285206807,3.02484419228218,4.63066984864705,5.73066879877513,6.70373719960675,2.42779753031517,0.528990979272033,1.90149421051854,0.338844532069132,3.55717918444456,1.7997994345628,0.988866362566974,5.6838409195688,4.19440154725767,5.76327457982332,3.52544681848824,2.70011876663381,3.15487442027073,3.42781181284564,2.87129103237098,2.08234358665422,3.06705507258356,3.67687514644008,2.20231761998777,5.49055553766307,4.30098293117482,3.16527090552465,2.74462930807229,2.08365348222704,3.62937898701795,3.93933827022176,4.43114918552749,3.24091444021034,5.26775218956681,2.79599168737951,13.7064409933063,12.0158780569789,14.2033599463822,8.60423876981386,13.599426674155,6.47643829965381,12.3457519315057,7.6164570806547,7.8648875273781,3.91989741929533,3.11743205523443,4.24007489412408,12.9575946194546,11.5493829672886,2.54805239706646,14.2213340630666,17.1027922398859,16.7217511213565,15.1657333504435,9.36307813696292,20.1971549244794,8.46120192669501,4.68410382268567,5.48037860961854,8.76338889573022,8.59119051149949,10.8181610564848,6.40899615781345,26.6970565153124,11.5679485535929,8.84610551949874,5.66183974815932,8.17113618303456,13.091631834651,3.72783522436244,4.68449275218475,7.54008144528438,15.0719662573069,9.34557971146178,8.99854096490112,7.11593271609162,4.6435098215495,1.83000241127451,1.88481528169297,2.60736480288415,4.34716277461562,3.74018480207208,6.48965052271031,8.65634592727688,12.4406970610093,10.867078612648,13.8891624885073,2.99277018814219,2.75882525320168,2.34080768746954,5.72678307775717,7.21186891004075,5.12454881139399,7.40243624021858,9.05461797586555,3.66465587985832,6.61871280587367,3.34307135911503,4.60311038097907,7.22922847986555,8.00979983000983,10.4948889568051,6.76716507182877,5.61770549850588,5.91900186363845,4.54661599032948,4.14251545071004,2.81431271977315,4.68161359798639,5.68187365404505,5.90292695242211,6.32495162838251,6.27841650826101,9.65784245038629,9.45799273174073,5.9241545968853,6.23836363500562,6.32336714457675,4.23979963533464,4.83010253640311,6.71032093801859,2.52347938276953,4.21908910755066,24.1205711578173,11.9002754998595,6.61193576659225,7.66381017139447,12.1135413642768,12.7060620512706,10.8965241483986,9.51128130562796,12.3377556001573,13.3406153326449,16.8394589896181,13.131127154716,12.6726656627428,15.2799299471218,15.3458015411033,16.9270082266212,5.50036912763937,6.62641373136427,6.76246414038483,7.73875045812194,8.53390943537553,11.9230893813542,11.1296305338693,12.251642282307,9.10592621479974,12.9567022117891,10.6722945751374,6.84064933435986,5.70021085828289,7.64531182108503,6.6943840058206,6.27060615356284,7.12952384987975,7.76779571117189,8.43103179230184,9.33508804839477,11.5014565221884,10.7920874823866,11.5453939052387,8.08252409430758,9.14926808961752,14.473305640901,13.3022296919955,5.11626811780309,6.02970412835496,7.80827394565865,9.62230017982859,19.095713348367,22.1380586023993,26.147908812945,18.7585821486367,16.8313164133069,20.0913008508434,15.2392882685636,16.9231282228578,19.3829738499225,1.50791283939272,5.4390568381871,14.7529281905711,13.7968373152366,2.56880943980467,9.72856998715286,3.11476396215683,3.7870639080656,5.99465616890888,1.95219372148319,7.53981892064796,11.2315335037699,12.6995244226965,15.0030561318081,7.69140333182299,6.42962887404886,7.90575555893047,2.89189184779626,10.0777460497871,4.09550888434687,7.32991317091092,18.1467135269789,15.9294166007955,5.82673526771955,11.1859716076958,10.3732793865744,5.90603785761546,13.5271465095328,11.3708448994017,13.8142817201452,12.4774082434652,11.3773232856894,9.48767477174989,20.6271086496374,6.46835250932197,3.78128297465751,2.71653235943784,4.71541477069503,6.38424841112185,7.31312152168489,6.91105886528908,5.17590413494819,9.38686832254841,14.8282449604674,2.42581237860458,22.4245304000413,16.9537648030701,20.506394475573,20.8901602005489,23.6362895632888,16.3229268512716,4.45020724825223,12.6444451790411,10.5257302661243,12.4080333337707,14.6927396463659,16.6766957819651,11.8964650067392,10.7086410896129,12.8755336137765,9.67399816630967,13.3653886522116,4.74503990371703,11.3858901591035,11.880587490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| ||
|short_description=p1@Usp6nl | |||
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Latest revision as of 20:18, 26 September 2015
Short description: | p1@Usp6nl |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Usp6nl_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENSMUST00000132391_5end |
EntrezGene: | Usp6nl |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.48e-07 | 25 |
endodermal cell | 9.95e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.54e-15 | 118 |
endoderm | 3.54e-15 | 118 |
presumptive endoderm | 3.54e-15 | 118 |
gastrointestinal system | 1.08e-14 | 47 |
digestive system | 1.33e-14 | 116 |
digestive tract | 1.33e-14 | 116 |
primitive gut | 1.33e-14 | 116 |
subdivision of digestive tract | 6.27e-14 | 114 |
trunk region element | 1.70e-11 | 79 |
intestine | 2.26e-10 | 31 |
organ component layer | 3.28e-10 | 24 |
subdivision of trunk | 3.27e-09 | 66 |
trunk | 3.26e-08 | 90 |
mucosa | 1.74e-07 | 15 |
intestinal mucosa | 6.30e-07 | 13 |
wall of intestine | 6.30e-07 | 13 |
gastrointestinal system mucosa | 6.30e-07 | 13 |
thoracic cavity element | 6.69e-07 | 17 |
thoracic segment organ | 6.69e-07 | 17 |
thoracic cavity | 6.69e-07 | 17 |
thoracic segment of trunk | 6.69e-07 | 17 |
respiratory primordium | 6.69e-07 | 17 |
endoderm of foregut | 6.69e-07 | 17 |