FFCP PHASE1:Mm9::chr3:88259064..88259088,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr3:88259064..88259088,- to FFCP PHASE1:Mm9::chr3:88259064..88259088,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20351 | |EntrezGene=20351 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=D3YWV5 | |UniProt=D3YWV5 | ||
|association_with_transcript=-268bp_to_uc008pvg.2_5end | |||
|cluster_id=chr3:88259064..88259088,- | |||
|description=CAGE_peak_11_at_Sema4a_5end | |||
|id=chr3:88259064..88259088,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.59e-13,6;CL:0000677,4.59e-13,6;CL:0000584,4.59e-13,6;CL:0000075,4.37e-11,7;CL:0002563,1.91e-08,9;CL:0002251,1.91e-08,9;CL:0000682,1.33e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.91e-13!59;UBERON:0000160!7.97e-12!43;UBERON:0004119!3.44e-11!130;UBERON:0000925!3.44e-11!130;UBERON:0006595!3.44e-11!130;UBERON:0000344!4.03e-11!15;UBERON:0001007!4.26e-11!128;UBERON:0001555!4.26e-11!128;UBERON:0007026!4.26e-11!128;UBERON:0004923!8.01e-11!24;UBERON:0004921!4.96e-10!126;UBERON:0004185!4.96e-10!126;UBERON:0001242!1.77e-09!13;UBERON:0000060!1.77e-09!13;UBERON:0001262!1.77e-09!13;UBERON:0004786!1.77e-09!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.93e-40,31;UBERON:0005409,8.52e-27,47;UBERON:0000344,1.60e-19,15;UBERON:0001242,6.39e-16,13;UBERON:0001262,6.39e-16,13;UBERON:0004786,6.39e-16,13;UBERON:0004923,5.26e-13,24;UBERON:0001007,1.91e-10,116;UBERON:0001555,1.91e-10,116;UBERON:0007026,1.91e-10,116;UBERON:0004119,3.80e-10,118;UBERON:0000925,3.80e-10,118;UBERON:0006595,3.80e-10,118;UBERON:0002108,1.49e-09,4;UBERON:0004921,7.60e-09,114;UBERON:0003350,1.91e-08,9;UBERON:0004808,1.91e-08,9;UBERON:0001277,1.91e-08,9;UBERON:0000331,1.39e-07,3;UBERON:0002116,1.39e-07,3;UBERON:0001204,1.39e-07,3;UBERON:0001168,1.39e-07,3;UBERON:0002465,6.37e-07,3;UBERON:0000485,9.10e-07,11 | |||
|phase1_expression=0,9.42233600626275,7.27998783023258,9.37639055051173,4.00716583957078,1.34303417529512,1.16806320297763,0.129123323441576,0,0,0,0.0797721589953364,0.513602189793617,0.524522414513984,0,0.202475267389826,0,0,0,0,0.0850432901510698,0.297872853602656,0.522399578277871,4.47978783821539,3.44113921600755,8.03924749761028,3.4460959692726,4.95583835177545,7.41091335879858,4.78857246543868,3.54768817048488,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,1.0470474879476,1.76469446409304,0,1.45653105909346,0,0,0,0,0,0,0,0,0,0,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,1.8125651855302,0,0,0,0,0,0,0.125666591329675,1.23597483867187,0,0,0,0,0.484875253135222,9.31958806090611,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,24.7814087237848,7.1401652999157,0,0,0.257734922644187,1.81515172161008,3.11329261382818,4.56541502670142,6.64340686162316,4.28217282282428,4.02136334080431,2.38747766449381,3.11942539390592,7.19055526923377,5.61958929674205,3.38540164532424,0,0,0,0,0.387904974335251,0.280543279561274,0.505892296994058,1.03327103585722,1.09899109488962,1.85095745882701,0,0.166845105716094,0.393117990226406,0,0.405720242777006,0,0,0.287696137450811,0,0.274561413188081,1.43768206527355,1.11642284300551,0,0.505157755894224,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.120625849856312,0.119372344003136,0,4.66369338607761,0,0.512612642393558,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0,0.138199973804424,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0,0.26175594198403,4.53652406521275,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0,0.632022241256357,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0.292373642219257,0,0.233753804363138,0,0,0,0,0.386379188064381,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.192075457214608,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0,0,0,0,0,0.818462086339379,0.464810523557898,0.192906610981141,0,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,9.42233600626275,7.27998783023258,9.37639055051173,4.00716583957078,1.34303417529512,1.16806320297763,0.129123323441576,0,0,0,0.0797721589953364,0.513602189793617,0.524522414513984,0,0.202475267389826,0,0,0,0,0.0850432901510698,0.297872853602656,0.522399578277871,4.47978783821539,3.44113921600755,8.03924749761028,3.4460959692726,4.95583835177545,7.41091335879858,4.78857246543868,3.54768817048488,0,0,0,0,0.166234645358492,0.204169356262369,0.418531630736908,0,1.0470474879476,1.76469446409304,0,1.45653105909346,0,0,0,0,0,0,0,0,0,0,1.45072428402269,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0.679971333707751,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,1.8125651855302,0,0,0,0,0,0,0.125666591329675,1.23597483867187,0,0,0,0,0.484875253135222,9.31958806090611,0,0,5.10914110417183,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,24.7814087237848,7.1401652999157,0,0,0.257734922644187,1.81515172161008,3.11329261382818,4.56541502670142,6.64340686162316,4.28217282282428,4.02136334080431,2.38747766449381,3.11942539390592,7.19055526923377,5.61958929674205,3.38540164532424,0,0,0,0,0.387904974335251,0.280543279561274,0.505892296994058,1.03327103585722,1.09899109488962,1.85095745882701,0,0.166845105716094,0.393117990226406,0,0.405720242777006,0,0,0.287696137450811,0,0.274561413188081,1.43768206527355,1.11642284300551,0,0.505157755894224,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0.163863314715738,0.345369963731791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.120625849856312,0.119372344003136,0,4.66369338607761,0,0.512612642393558,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0.169978429993855,0,0.138199973804424,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.134864346384821,0,0.26175594198403,4.53652406521275,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0,0,0,0.632022241256357,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0.292373642219257,0,0.233753804363138,0,0,0,0,0.386379188064381,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0.192075457214608,0.114870937911227,0,0.231768651889711,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0,0,0,0,0,0,0.818462086339379,0.464810523557898,0.192906610981141,0,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p11@Sema4a | |||
}} | }} |
Latest revision as of 19:46, 25 September 2015
Short description: | p11@Sema4a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Sema4a_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -268bp_to_uc008pvg.2_5end |
EntrezGene: | Sema4a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.59e-13 | 6 |
gut absorptive cell | 4.59e-13 | 6 |
enterocyte | 4.59e-13 | 6 |
columnar/cuboidal epithelial cell | 4.37e-11 | 7 |
intestinal epithelial cell | 1.91e-08 | 9 |
epithelial cell of alimentary canal | 1.91e-08 | 9 |
M cell of gut | 1.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.93e-40 | 31 |
gastrointestinal system | 8.52e-27 | 47 |
mucosa | 1.60e-19 | 15 |
intestinal mucosa | 6.39e-16 | 13 |
wall of intestine | 6.39e-16 | 13 |
gastrointestinal system mucosa | 6.39e-16 | 13 |
organ component layer | 5.26e-13 | 24 |
digestive system | 1.91e-10 | 116 |
digestive tract | 1.91e-10 | 116 |
primitive gut | 1.91e-10 | 116 |
endoderm-derived structure | 3.80e-10 | 118 |
endoderm | 3.80e-10 | 118 |
presumptive endoderm | 3.80e-10 | 118 |
small intestine | 1.49e-09 | 4 |
subdivision of digestive tract | 7.60e-09 | 114 |
epithelium of mucosa | 1.91e-08 | 9 |
gastrointestinal system epithelium | 1.91e-08 | 9 |
intestinal epithelium | 1.91e-08 | 9 |
ileal mucosa | 1.39e-07 | 3 |
ileum | 1.39e-07 | 3 |
mucosa of small intestine | 1.39e-07 | 3 |
wall of small intestine | 1.39e-07 | 3 |
lymphoid system | 6.37e-07 | 3 |
simple columnar epithelium | 9.10e-07 | 11 |