FFCP PHASE1:Mm9::chr3:95119162..95119195,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:95119162..95119195,+ to FFCP PHASE1:Mm9::chr3:95119162..95119195,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=76893 | |EntrezGene=76893 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2985 | |||
|TSSclassifier=NA | |||
|UniProt=Q924Z4 | |UniProt=Q924Z4 | ||
|association_with_transcript=0bp_to_ENSMUST00000133748,ENSMUST00000154055,NM_029789,uc008qjj.1_5end | |||
|cluster_id=chr3:95119162..95119195,+ | |||
|description=CAGE_peak_1_at_Lass2_5end | |||
|id=chr3:95119162..95119195,+ | |||
|ontology_enrichment_celltype=CL:0000219!5.60e-11!54;CL:0000063!1.27e-08!66;CL:0002320!2.19e-07!46;CL:0000134!2.19e-07!46;CL:0000144!4.25e-07!121;CL:0000012!4.25e-07!121;CL:0000333!9.16e-07!10;CL:0000095!9.16e-07!10;CL:0000243!9.16e-07!10;CL:0000123!9.16e-07!10;CL:0000125!9.16e-07!10;CL:0000030!9.16e-07!10;CL:0000339!9.16e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,5.60e-11,54;CL:0002320,2.19e-07,46;CL:0000134,2.19e-07,46;CL:0000333,9.16e-07,10;CL:0000095,9.16e-07,10;CL:0000243,9.16e-07,10;CL:0000123,9.16e-07,10;CL:0000125,9.16e-07,10;CL:0000030,9.16e-07,10;CL:0000339,9.16e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0009569!1.06e-11!66;UBERON:0002100!2.89e-10!98;UBERON:0005256!3.83e-10!47;UBERON:0002365!2.72e-08!25;UBERON:0002330!2.72e-08!25;UBERON:0005177!2.79e-08!85;UBERON:0000926!4.13e-08!193;UBERON:0004120!4.13e-08!193;UBERON:0006603!4.13e-08!193;UBERON:0005172!5.72e-08!49;UBERON:0005173!5.72e-08!49;UBERON:0002417!5.72e-08!49;UBERON:0000916!5.72e-08!49;UBERON:0002107!1.88e-07!22;UBERON:0007499!1.88e-07!22;UBERON:0006925!1.88e-07!22;UBERON:0009497!1.88e-07!22;UBERON:0000015!1.88e-07!22;UBERON:0002423!1.88e-07!22;UBERON:0006235!1.88e-07!22;UBERON:0008835!1.88e-07!22;UBERON:0003894!1.88e-07!22;UBERON:0004161!1.88e-07!22;UBERON:0008836!1.88e-07!22;UBERON:0003104!2.12e-07!131;UBERON:0009142!2.12e-07!131;UBERON:0002384!2.19e-07!46;UBERON:0002405!4.35e-07!70;UBERON:0009854!5.90e-07!23;UBERON:0009856!5.90e-07!23;UBERON:0004119!6.63e-07!130;UBERON:0000925!6.63e-07!130;UBERON:0006595!6.63e-07!130;UBERON:0002204!6.64e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,5.79e-12,90;UBERON:0009569,1.06e-11,66;UBERON:0005256,1.82e-10,45;UBERON:0003104,5.00e-10,61;UBERON:0009142,5.00e-10,61;UBERON:0005177,9.56e-10,79;UBERON:0002365,2.72e-08,25;UBERON:0002330,2.72e-08,25;UBERON:0005172,5.72e-08,49;UBERON:0005173,5.72e-08,49;UBERON:0002417,5.72e-08,49;UBERON:0000916,5.72e-08,49;UBERON:0004119,9.74e-08,118;UBERON:0000925,9.74e-08,118;UBERON:0006595,9.74e-08,118;UBERON:0002107,1.88e-07,22;UBERON:0007499,1.88e-07,22;UBERON:0006925,1.88e-07,22;UBERON:0009497,1.88e-07,22;UBERON:0000015,1.88e-07,22;UBERON:0002423,1.88e-07,22;UBERON:0006235,1.88e-07,22;UBERON:0008835,1.88e-07,22;UBERON:0003894,1.88e-07,22;UBERON:0004161,1.88e-07,22;UBERON:0008836,1.88e-07,22;UBERON:0002384,2.19e-07,46;UBERON:0001007,4.43e-07,116;UBERON:0001555,4.43e-07,116;UBERON:0007026,4.43e-07,116;UBERON:0009854,5.90e-07,23;UBERON:0009856,5.90e-07,23;UBERON:0002204,6.64e-07,32 | |||
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| ||
|short_description=p1@Lass2 | |||
}} | }} |
Latest revision as of 23:19, 25 September 2015
Short description: | p1@Lass2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lass2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2985 |
Association with transcript: | 0bp_to_ENSMUST00000133748, ENSMUST00000154055, NM_029789, uc008qjj.1_5end |
EntrezGene: | Lass2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 5.60e-11 | 54 |
connective tissue cell | 2.19e-07 | 46 |
mesenchymal cell | 2.19e-07 | 46 |
migratory neural crest cell | 9.16e-07 | 10 |
neuron associated cell | 9.16e-07 | 10 |
glial cell (sensu Vertebrata) | 9.16e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 9.16e-07 | 10 |
glial cell | 9.16e-07 | 10 |
glioblast | 9.16e-07 | 10 |
glioblast (sensu Vertebrata) | 9.16e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
trunk | 5.79e-12 | 90 |
subdivision of trunk | 1.06e-11 | 66 |
trunk mesenchyme | 1.82e-10 | 45 |
mesenchyme | 5.00e-10 | 61 |
entire embryonic mesenchyme | 5.00e-10 | 61 |
trunk region element | 9.56e-10 | 79 |
exocrine gland | 2.72e-08 | 25 |
exocrine system | 2.72e-08 | 25 |
abdomen element | 5.72e-08 | 49 |
abdominal segment element | 5.72e-08 | 49 |
abdominal segment of trunk | 5.72e-08 | 49 |
abdomen | 5.72e-08 | 49 |
endoderm-derived structure | 9.74e-08 | 118 |
endoderm | 9.74e-08 | 118 |
presumptive endoderm | 9.74e-08 | 118 |
liver | 1.88e-07 | 22 |
epithelial sac | 1.88e-07 | 22 |
digestive gland | 1.88e-07 | 22 |
epithelium of foregut-midgut junction | 1.88e-07 | 22 |
anatomical boundary | 1.88e-07 | 22 |
hepatobiliary system | 1.88e-07 | 22 |
foregut-midgut junction | 1.88e-07 | 22 |
hepatic diverticulum | 1.88e-07 | 22 |
liver primordium | 1.88e-07 | 22 |
septum transversum | 1.88e-07 | 22 |
liver bud | 1.88e-07 | 22 |
connective tissue | 2.19e-07 | 46 |
digestive system | 4.43e-07 | 116 |
digestive tract | 4.43e-07 | 116 |
primitive gut | 4.43e-07 | 116 |
digestive tract diverticulum | 5.90e-07 | 23 |
sac | 5.90e-07 | 23 |
musculoskeletal system | 6.64e-07 | 32 |