Personal tools

FFCP PHASE1:Mm9::chr4:117852559..117852640,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr4:117852559..117852640,-
|DHSsupport=NA
|short_description=p1@Kdm4a
|DPIdataset=NA
|description=CAGE_peak_1_at_Kdm4a_5end
|association_with_transcript=0bp_to_ENSMUST00000106403_5end
|EntrezGene=230674
|EntrezGene=230674
|HGNC=
|HGNC=
|MCL_coexpression_id=425
|TSSclassifier=NA
|UniProt=Q8BW72
|UniProt=Q8BW72
|association_with_transcript=0bp_to_ENSMUST00000106403_5end
|cluster_id=chr4:117852559..117852640,-
|description=CAGE_peak_1_at_Kdm4a_5end
|id=chr4:117852559..117852640,-
|ontology_enrichment_celltype=CL:0000540!5.13e-10!33;CL:0000047!5.13e-10!33;CL:0000031!5.13e-10!33;CL:0000404!5.13e-10!33;CL:0000393!2.86e-07!39;CL:0000211!2.86e-07!39
|ontology_enrichment_celltype_v019_2=CL:0000540,5.13e-10,33;CL:0000047,5.13e-10,33;CL:0000031,5.13e-10,33;CL:0000404,5.13e-10,33;CL:0000393,2.86e-07,39;CL:0000211,2.86e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!8.21e-10!102;UBERON:0000924!8.21e-10!102;UBERON:0006601!8.21e-10!102;UBERON:0001017!2.86e-09!73;UBERON:0005743!2.86e-09!73;UBERON:0002346!3.00e-09!71;UBERON:0003075!3.00e-09!71;UBERON:0007284!3.00e-09!71;UBERON:0000073!2.41e-08!75;UBERON:0001016!2.41e-08!75;UBERON:0000153!8.12e-08!94;UBERON:0003056!1.38e-07!49;UBERON:0000033!4.50e-07!63
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.75e-10,95;UBERON:0000924,5.75e-10,95;UBERON:0006601,5.75e-10,95;UBERON:0010371,6.01e-10,73;UBERON:0002346,1.26e-09,64;UBERON:0003075,1.26e-09,64;UBERON:0007284,1.26e-09,64;UBERON:0001017,2.86e-09,73;UBERON:0010314,9.88e-09,92;UBERON:0001016,2.41e-08,75;UBERON:0003056,1.38e-07,49
|phase1_expression=50.6070356851149,12.9120900826564,11.8299802241279,13.6108895088074,13.023288978605,18.8024784541317,17.9881733258555,21.1762250444185,9.99599927276834,11.2350972634557,7.70480857014772,8.93448180747768,18.1472773727078,17.0469784717045,13.3243904726265,15.7930708564064,15.3903613188192,19.7163853348899,18.6475629703805,19.5219239827094,21.5159524082207,27.6028844338461,17.5003858723087,19.1990907352088,12.6175104586944,16.6527269593356,14.6459078694085,12.2818602630957,13.8717096203153,16.1299283046356,9.97787297948871,15.8757668364908,20.9122027778754,15.8481681015439,17.6199488048278,7.31432439577366,8.37094360675713,24.6933662134776,12.5013655123808,21.9879972468995,18.8234076169925,19.8083190637949,27.6740901227758,20.2693876940679,18.9574861380492,21.4749700029167,23.4717403304412,15.0437357902508,25.9229695626677,19.0541301092798,23.937678097937,20.125359011096,18.1205214542355,15.9579671242496,21.1739093459752,21.8670520630555,21.203474555468,15.4701627683233,58.2671407275642,56.0730438028355,53.8756692980252,26.7687180334614,27.5681386794453,10.7987966073768,9.88866362566974,10.6572017241915,14.6804054154018,15.7529505181837,65.7392142035748,68.1779988575038,58.0496893329814,29.136400409188,29.154647405613,55.978295241234,57.3155916689053,54.2339084099912,19.82085857989,21.8345348125671,21.3513081226178,64.2286221246044,61.9371347188313,70.3233050251626,15.355064945076,14.6318278608237,18.3357897332172,39.4802304534715,40.7183007085434,51.2598476019577,13.4792624133068,18.1371744256285,16.5222758559956,14.6272059086836,12.2394840067395,8.63525106620507,15.5946340187441,15.6809410484067,13.6231087527799,20.792499354523,19.743736349818,19.0803370235584,44.6473640692077,30.7983545794363,15.2883143823987,0,14.7213907887626,13.6814327356553,15.1657333504435,16.3282947998256,24.081223179187,27.3133535879278,24.8084017275574,24.3572382649713,23.753396217374,25.170680972288,35.2766121407114,21.8659868913635,18.2924276123437,19.0871151134283,9.73071607144862,21.353224193058,23.4092009568017,24.7286379098963,13.0474232852686,31.6203260772471,41.4704479490641,18.3929079750186,15.6957813102756,8.39863823390771,19.568814969252,22.7681771895331,27.9075367719362,60.5653977184006,27.2904182701874,27.6172693916757,19.3242881440391,29.5279098783319,33.6069900706044,22.6420686510369,27.2940579108369,23.990371571058,42.6795052917668,27.5882525320167,36.1924880908752,37.9776140946002,46.8091114161136,52.6547390370733,48.2563881482603,31.8205146008989,52.1674542897478,52.9497024469894,51.729630504201,36.605687315405,40.8729456361629,36.9147296513497,37.2465666898378,32.2435512245959,4.91549231119264,7.20574139921202,10.2298859782413,27.5477277472218,27.9086011377504,28.2697436493793,26.2786656499583,24.7922932001729,27.6138132068407,28.3691412595498,19.3156849007726,30.8260503849327,20.7345410890985,26.2667942526552,24.4827804828484,27.0469976736865,19.5399602609035,28.4517607771988,23.3421842906181,56.5975368086064,21.1468021109631,10.8424732332053,40.098191100624,40.8736542474372,30.412720872014,26.2188582010345,24.9063409106255,24.9195570207452,21.353807769503,20.7520682952254,22.368833583224,27.8539060857611,24.37051088989,21.5716658077013,17.2910439899755,21.3081162382173,32.62287896393,38.8444942873078,43.9560169125014,37.2681929956925,36.4630675875136,43.9050232513394,36.7404280691935,25.241335304512,32.3417379353232,25.9134044235781,11.2651998293117,19.1871871573508,15.1350426237166,17.0895205412489,21.5031728671813,20.7412357387078,23.4255783638906,15.247895284893,21.0775794807546,15.9245619649087,20.1275489138296,20.0956111740992,19.0342980599882,13.8918382870911,20.0925103144542,18.8152973331713,23.4636551511588,31.0765915303595,36.5041547230138,40.2295853287196,36.8463689812948,42.3790831327794,36.6587206964461,34.5386556708304,34.3644614151496,40.306573516077,34.9205943359897,29.9869865929801,26.9388571710797,29.2191098334653,18.0949540727127,18.4927932498361,12.7858710984949,20.9711927191597,19.266070798535,29.1857099614586,39.8361917265321,30.8014531189335,32.1818383804582,46.0717718270033,44.8080667284222,42.0585084396492,42.1089494015725,39.9137908412254,38.0522059574401,36.531982238914,43.0863677961711,35.024023489977,35.6269613872754,36.8595799591218,41.5361746351619,35.7985166850402,11.9470624505967,31.5614827001476,25.0928552280743,23.0098197302196,22.4429438589387,17.8312385807478,21.9664049192988,18.1766864738753,27.0938007572388,18.962205476149,13.7044191147498,18.5643977846736,29.2778060948258,48.0763121063598,40.7479853915677,38.7950033407182,34.9360260275279,33.1766000739851,32.7452550998221,35.6223990464081,16.6616912725234,16.9465656691056,16.5396298541221,22.0947578941583,36.4909604332747,29.6739590646527,30.9174370968123,25.2776985607394,18.9462543809403,27.6283699995659,19.8210221725509,33.6410594780053,29.6311243791539,24.1111624966004,22.8279360294112,19.2173665493479,14.9581018394593,16.6542228265153,19.0715963850105,20.0480829783174,39.2256632040608,34.7676288786911,34.6697144037982,29.2723614420256,32.5360219981805,25.2196327739615,28.4327887695156,20.6787194167383,21.7753155130212,18.0188400795208,12.4012446510522,40.3694674318743,28.2934018681637,34.4178603368964,31.3858371050887,29.5673219608862,38.9626032303903,26.3012857384779,23.1739151180821,16.9108884578204,16.1296803504405,33.4971787865869,19.6643458831459,24.1370749337344,25.984164595559,24.16860391511,31.5903354102211,30.770035077112,34.2639703045019,37.8624187305554,36.8840944210199,38.0114717965889,35.8645001122289,38.8695840226931,43.7119614159068,24.9403421976732,5.10567692760349,9.15081337416652,6.88326927092722,28.0124911346676,19.5189774469229,26.3738338944862,22.723048182381,27.0848936179096,29.9318476587045,34.0640675015311,32.0821487526062,31.6209855512385,26.718218271055,19.6402413321322,25.6508550088086,24.3173449741079,21.7508356312418,19.6748918465692,49.2989901024839,54.2673827825402,42.1712006212711,29.9021261994002,31.8612007194533,25.921934691452,23.113659691368,24.5181718114284,27.2781328153043,26.5332072351987,26.1083678886947,27.9166985251393,28.7479427932539,30.2198719350983,30.6131049533419,28.5776214769844,23.4086338408608,24.8852894398179,27.1976694530182,27.3789991449979,26.0580631812916,30.1708870470874,28.8507789836258,24.2728515775989,27.2917203204459,26.9920599174448,32.9270351170991,26.5700408552221,27.9756474522475,17.3954104213899,24.4388137335799,24.0350936996375,27.4184798923692,24.4800209073826,32.2154040338506,38.9704501583196,32.2825619654664,35.4537239179692,28.8845381423953,23.8238732649077,19.4768981921154
|phase1_expression=50.6070356851149,12.9120900826564,11.8299802241279,13.6108895088074,13.023288978605,18.8024784541317,17.9881733258555,21.1762250444185,9.99599927276834,11.2350972634557,7.70480857014772,8.93448180747768,18.1472773727078,17.0469784717045,13.3243904726265,15.7930708564064,15.3903613188192,19.7163853348899,18.6475629703805,19.5219239827094,21.5159524082207,27.6028844338461,17.5003858723087,19.1990907352088,12.6175104586944,16.6527269593356,14.6459078694085,12.2818602630957,13.8717096203153,16.1299283046356,9.97787297948871,15.8757668364908,20.9122027778754,15.8481681015439,17.6199488048278,7.31432439577366,8.37094360675713,24.6933662134776,12.5013655123808,21.9879972468995,18.8234076169925,19.8083190637949,27.6740901227758,20.2693876940679,18.9574861380492,21.4749700029167,23.4717403304412,15.0437357902508,25.9229695626677,19.0541301092798,23.937678097937,20.125359011096,18.1205214542355,15.9579671242496,21.1739093459752,21.8670520630555,21.203474555468,15.4701627683233,58.2671407275642,56.0730438028355,53.8756692980252,26.7687180334614,27.5681386794453,10.7987966073768,9.88866362566974,10.6572017241915,14.6804054154018,15.7529505181837,65.7392142035748,68.1779988575038,58.0496893329814,29.136400409188,29.154647405613,55.978295241234,57.3155916689053,54.2339084099912,19.82085857989,21.8345348125671,21.3513081226178,64.2286221246044,61.9371347188313,70.3233050251626,15.355064945076,14.6318278608237,18.3357897332172,39.4802304534715,40.7183007085434,51.2598476019577,13.4792624133068,18.1371744256285,16.5222758559956,14.6272059086836,12.2394840067395,8.63525106620507,15.5946340187441,15.6809410484067,13.6231087527799,20.792499354523,19.743736349818,19.0803370235584,44.6473640692077,30.7983545794363,15.2883143823987,0,14.7213907887626,13.6814327356553,15.1657333504435,16.3282947998256,24.081223179187,27.3133535879278,24.8084017275574,24.3572382649713,23.753396217374,25.170680972288,35.2766121407114,21.8659868913635,18.2924276123437,19.0871151134283,9.73071607144862,21.353224193058,23.4092009568017,24.7286379098963,13.0474232852686,31.6203260772471,41.4704479490641,18.3929079750186,15.6957813102756,8.39863823390771,19.568814969252,22.7681771895331,27.9075367719362,60.5653977184006,27.2904182701874,27.6172693916757,19.3242881440391,29.5279098783319,33.6069900706044,22.6420686510369,27.2940579108369,23.990371571058,42.6795052917668,27.5882525320167,36.1924880908752,37.9776140946002,46.8091114161136,52.6547390370733,48.2563881482603,31.8205146008989,52.1674542897478,52.9497024469894,51.729630504201,36.605687315405,40.8729456361629,36.9147296513497,37.2465666898378,32.2435512245959,4.91549231119264,7.20574139921202,10.2298859782413,27.5477277472218,27.9086011377504,28.2697436493793,26.2786656499583,24.7922932001729,27.6138132068407,28.3691412595498,19.3156849007726,30.8260503849327,20.7345410890985,26.2667942526552,24.4827804828484,27.0469976736865,19.5399602609035,28.4517607771988,23.3421842906181,56.5975368086064,21.1468021109631,10.8424732332053,40.098191100624,40.8736542474372,30.412720872014,26.2188582010345,24.9063409106255,24.9195570207452,21.353807769503,20.7520682952254,22.368833583224,27.8539060857611,24.37051088989,21.5716658077013,17.2910439899755,21.3081162382173,32.62287896393,38.8444942873078,43.9560169125014,37.2681929956925,36.4630675875136,43.9050232513394,36.7404280691935,25.241335304512,32.3417379353232,25.9134044235781,11.2651998293117,19.1871871573508,15.1350426237166,17.0895205412489,21.5031728671813,20.7412357387078,23.4255783638906,15.247895284893,21.0775794807546,15.9245619649087,20.1275489138296,20.0956111740992,19.0342980599882,13.8918382870911,20.0925103144542,18.8152973331713,23.4636551511588,31.0765915303595,36.5041547230138,40.2295853287196,36.8463689812948,42.3790831327794,36.6587206964461,34.5386556708304,34.3644614151496,40.306573516077,34.9205943359897,29.9869865929801,26.9388571710797,29.2191098334653,18.0949540727127,18.4927932498361,12.7858710984949,20.9711927191597,19.266070798535,29.1857099614586,39.8361917265321,30.8014531189335,32.1818383804582,46.0717718270033,44.8080667284222,42.0585084396492,42.1089494015725,39.9137908412254,38.0522059574401,36.531982238914,43.0863677961711,35.024023489977,35.6269613872754,36.8595799591218,41.5361746351619,35.7985166850402,11.9470624505967,31.5614827001476,25.0928552280743,23.0098197302196,22.4429438589387,17.8312385807478,21.9664049192988,18.1766864738753,27.0938007572388,18.962205476149,13.7044191147498,18.5643977846736,29.2778060948258,48.0763121063598,40.7479853915677,38.7950033407182,34.9360260275279,33.1766000739851,32.7452550998221,35.6223990464081,16.6616912725234,16.9465656691056,16.5396298541221,22.0947578941583,36.4909604332747,29.6739590646527,30.9174370968123,25.2776985607394,18.9462543809403,27.6283699995659,19.8210221725509,33.6410594780053,29.6311243791539,24.1111624966004,22.8279360294112,19.2173665493479,14.9581018394593,16.6542228265153,19.0715963850105,20.0480829783174,39.2256632040608,34.7676288786911,34.6697144037982,29.2723614420256,32.5360219981805,25.2196327739615,28.4327887695156,20.6787194167383,21.7753155130212,18.0188400795208,12.4012446510522,40.3694674318743,28.2934018681637,34.4178603368964,31.3858371050887,29.5673219608862,38.9626032303903,26.3012857384779,23.1739151180821,16.9108884578204,16.1296803504405,33.4971787865869,19.6643458831459,24.1370749337344,25.984164595559,24.16860391511,31.5903354102211,30.770035077112,34.2639703045019,37.8624187305554,36.8840944210199,38.0114717965889,35.8645001122289,38.8695840226931,43.7119614159068,24.9403421976732,5.10567692760349,9.15081337416652,6.88326927092722,28.0124911346676,19.5189774469229,26.3738338944862,22.723048182381,27.0848936179096,29.9318476587045,34.0640675015311,32.0821487526062,31.6209855512385,26.718218271055,19.6402413321322,25.6508550088086,24.3173449741079,21.7508356312418,19.6748918465692,49.2989901024839,54.2673827825402,42.1712006212711,29.9021261994002,31.8612007194533,25.921934691452,23.113659691368,24.5181718114284,27.2781328153043,26.5332072351987,26.1083678886947,27.9166985251393,28.7479427932539,30.2198719350983,30.6131049533419,28.5776214769844,23.4086338408608,24.8852894398179,27.1976694530182,27.3789991449979,26.0580631812916,30.1708870470874,28.8507789836258,24.2728515775989,27.2917203204459,26.9920599174448,32.9270351170991,26.5700408552221,27.9756474522475,17.3954104213899,24.4388137335799,24.0350936996375,27.4184798923692,24.4800209073826,32.2154040338506,38.9704501583196,32.2825619654664,35.4537239179692,28.8845381423953,23.8238732649077,19.4768981921154
|short_description=p1@Kdm4a
}}
}}

Latest revision as of 05:54, 26 September 2015

Short description:p1@Kdm4a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Kdm4a_5end
Coexpression cluster:MCL_coexpression_mm9:425
Association with transcript: 0bp_to_ENSMUST00000106403_5end
EntrezGene:Kdm4a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Kdm4a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G750.61
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I611.83
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.61
CD326+ enterocyte, pool2.CNhs13197.11849-124I413.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I718.80
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I817.99
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E921.18
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F211.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.93
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E418.15
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E817.05
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A113.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A315.79
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A515.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A219.72
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A418.65
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A619.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H227.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I917.50
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D119.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.62
GP2+ M cell, pool1.CNhs13228.11845-124H916.65
GP2+ M cell, pool2.CNhs13231.11846-124I114.65
GP2+ M cell, pool3.CNhs13240.11847-124I212.28
Ileum epithelium, pool1.CNhs13199.10252-104B913.87
Ileum epithelium, pool2.CNhs13232.10253-104C116.13
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C89.98
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I315.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G620.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F517.62
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F67.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F78.37
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G824.69
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H112.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H321.99
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G918.82
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H219.81
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H427.67
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D820.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D918.96
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B321.47
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B723.47
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C215.04
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B825.92
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C319.05
Mouse Astrocytes, donor2.CNhs12078.11552-120C423.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C420.13
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A218.12
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.96
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A121.17
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C121.87
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E121.20
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C515.47
Mouse Granule cells, donor1.CNhs12131.11713-123C358.27
Mouse Granule cells, donor2.CNhs12357.11731-123E356.07
Mouse Granule cells, donor3.CNhs12108.11636-122C753.88
Mouse Meningeal cells, donor1.CNhs12132.11716-123C626.77
Mouse Meningeal cells, donor3.CNhs12109.11639-122D127.57
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C710.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D210.66
Mouse Microglia, donor1.CNhs12629.11718-123C814.68
Mouse Microglia, donor2.CNhs12634.11736-123E815.75
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D565.74
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F568.18
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D958.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F129.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D529.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D255.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F257.32
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D654.23
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D319.82
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F321.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D721.35
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D464.23
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F461.94
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D870.32
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.36
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E514.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.34
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D639.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F640.72
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E151.26
Mouse Schwann, donor1.CNhs12507.11728-123D913.48
Mouse Schwann, donor2.CNhs12573.11746-123F918.14
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G316.52
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F714.63
Mouse hepatocyte, donor1.CNhs13078.11714-123C412.24
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.64
Mouse hepatocyte, donor6.CNhs13090.11822-124F415.59
Mouse hepatocyte, donor8.CNhs13091.11824-124F615.68
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A713.62
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I720.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E319.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I819.08
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G644.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H130.80
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I815.29
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G114.72
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.68
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G315.17
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B616.33
accessory axillary lymph node, adult.CNhs10475.1063-29H924.08
adrenal gland, adult.CNhs10508.49-24D727.31
adrenal gland, embryo E14.CNhs11038.406-44C524.81
adrenal gland, embryo E16.CNhs11004.1254-43D624.36
adrenal gland, embryo E17.CNhs11043.1263-45I123.75
adrenal gland, embryo E18.CNhs11026.1262-18F525.17
adrenal gland, neonate N00.CNhs11191.1311-23C135.28
adrenal gland, neonate N25.CNhs11223.1377-27I321.87
amnion, adult pregnant day17.5.CNhs10488.583-22A818.29
aorta, adult.CNhs10498.46-23H119.09
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F521.35
bone (os femoris), neonate N16.CNhs11225.1525-43A623.41
bone (os femoris), neonate N20.CNhs11195.1350-25C324.73
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B231.62
cerebellum, neonate N30.CNhs11135.1395-42I241.47
colon, adult.CNhs10468.36-18H718.39
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C715.70
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D18.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D419.57
corpora quadrigemina, adult.CNhs10501.16-22A422.77
corpus striatum, adult.CNhs10487.19-21D827.91
corpus striatum, neonate N00.CNhs11226.630-43F160.57
cortex, adult.CNhs10473.12-14D527.29
cortex, neonate N30.CNhs11107.1392-42F227.62
diencephalon, adult.CNhs10482.20-12F219.32
diencephalon, neonate N30.CNhs11201.1388-42B229.53
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B133.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A222.64
epididymis, adult.CNhs10490.58-23B227.29
eyeball, adult.CNhs10484.31-12G423.99
eyeball, embryo E12.CNhs11016.345-16C642.68
eyeball, embryo E14.CNhs10521.399-16E227.59
eyeball, embryo E15.CNhs10593.426-16C936.19
eyeball, embryo E17.CNhs11023.1261-18D437.98
eyeball, neonate N00.CNhs11207.633-15C646.81
eyeball, neonate N01.CNhs11140.1532-43E752.65
eyeball, neonate N02.CNhs11205.1551-44G848.26
eyeball, neonate N16.CNhs11188.777-19A231.82
forelimb, embryo E11.CNhs10596.335-25E252.17
forelimb, embryo E12.CNhs10600.359-14H252.95
forelimb, embryo E13.CNhs10589.384-1E251.73
forelimb, embryo E14.CNhs10577.413-26A836.61
forelimb, embryo E15.CNhs11007.437-20E740.87
forelimb, embryo E17.CNhs10598.1517-43C436.91
forelimb, embryo E18.CNhs11008.1520-43B537.25
gonad, embryo E13.CNhs11044.1564-45I632.24
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.21
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D510.23
heart, embryo E11.CNhs10586.331-24E927.55
heart, embryo E12.CNhs11015.353-12F527.91
heart, embryo E13.CNhs11013.376-3I928.27
heart, embryo E14.CNhs10597.403-26D426.28
heart, embryo E15.CNhs11017.431-16C824.79
heart, embryo E16.CNhs11021.457-17C627.61
heart, embryo E17.CNhs11025.479-18E528.37
heart, embryo E18.CNhs11030.1283-20G319.32
heart, neonate N00.CNhs11213.639-21E330.83
heart, neonate N03.CNhs11221.1349-25I220.73
heart, neonate N10.CNhs11118.749-24G126.27
heart, neonate N16.CNhs11209.782-15G124.48
heart, neonate N20.CNhs11127.821-26I627.05
heart, neonate N25.CNhs11196.1351-25D319.54
heart, neonate N30.CNhs11202.1390-42D228.45
hippocampus, adult.CNhs10478.13-16E823.34
hippocampus, neonate N00.CNhs11228.627-43G156.60
intestinal mucosa, adult.CNhs10506.860-29I321.15
intestine, adult.CNhs10496.178-9A310.84
intestine, embryo E12.CNhs11019.1251-16I540.10
intestine, embryo E13.CNhs11010.381-16D540.87
intestine, embryo E15.CNhs10602.976-16D830.41
intestine, embryo E16.CNhs10585.463-22H426.22
intestine, embryo E17.CNhs10582.482-18D324.91
intestine, embryo E18.CNhs10526.1289-20F724.92
intestine, neonate N00.CNhs11126.644-26D121.35
intestine, neonate N01.CNhs11192.1322-23E920.75
intestine, neonate N06.CNhs11102.688-20B822.37
intestine, neonate N07.CNhs11095.720-20F227.85
intestine, neonate N10.CNhs11098.755-23A524.37
intestine, neonate N20.CNhs11187.827-18D121.57
intestine, neonate N25.CNhs11121.1352-25E317.29
intestine, neonate N30.CNhs11131.1384-42G121.31
kidney, embryo E14.CNhs10606.411-4I932.62
kidney, embryo E15.CNhs10997.434-16F838.84
kidney, embryo E16.CNhs10584.464-22A543.96
kidney, embryo E17.CNhs11028.483-18I237.27
kidney, embryo E18.CNhs11001.1288-20C736.46
kidney, neonate N00.CNhs11214.646-21G743.91
kidney, neonate N10.CNhs11206.758-6D536.74
kidney, neonate N20.CNhs11113.832-19I125.24
kidney, neonate N25.CNhs11122.1353-25F332.34
kidney, neonate N30.CNhs11203.1385-42H125.91
liver, adult pregnant day01.CNhs10466.508-5B211.27
liver, embryo E12.CNhs10601.355-15F819.19
liver, embryo E13.CNhs10524.378-3H615.14
liver, embryo E14.CNhs10594.409-16E117.09
liver, embryo E15.CNhs10520.433-16D721.50
liver, embryo E16.CNhs10523.462-17F520.74
liver, embryo E17.CNhs10510.481-18A323.43
liver, embryo E18.CNhs10579.499-43G415.25
liver, neonate N00.CNhs11117.641-24F421.08
liver, neonate N03.CNhs11123.1345-25G215.92
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H220.10
liver, neonate N10.CNhs11115.751-24B919.03
liver, neonate N20.CNhs11220.823-25A313.89
liver, neonate N25.CNhs11198.1368-26H120.09
liver, neonate N30.CNhs11106.1382-42D118.82
lung, adult.CNhs10474.28-22B123.46
lung, embryo E12.CNhs10522.354-16G231.08
lung, embryo E14.CNhs10604.404-26F836.50
lung, embryo E15.CNhs11020.432-17C540.23
lung, embryo E16.CNhs10998.458-17B636.85
lung, embryo E17.CNhs10605.480-44A642.38
lung, embryo E18.CNhs10583.1287-20I636.66
lung, neonate N00.CNhs11224.640-42C634.54
lung, neonate N06.CNhs11212.683-20E534.36
lung, neonate N07.CNhs11111.715-19A340.31
lung, neonate N10.CNhs11219.750-23E634.92
lung, neonate N20.CNhs11109.822-18A429.99
lung, neonate N25.CNhs11119.1359-25C726.94
lung, neonate N30.CNhs11133.1394-42H229.22
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A118.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A118.49
mammary gland, adult lactating day02.CNhs10480.595-22B612.79
mammary gland, adult pregnant day19.CNhs10476.588-5H220.97
medulla oblongata, adult.CNhs10477.17-12C219.27
medulla oblongata, neonate N30.CNhs11200.1396-42A329.19
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C739.84
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C230.80
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E132.18
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E246.07
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E344.81
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D742.06
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D842.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D939.91
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D438.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D536.53
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D643.09
olfactory brain, adult.CNhs10489.18-22I935.02
ovary, adult.CNhs10507.91-2I735.63
ovary, embryo E18.CNhs11040.505-44H736.86
ovary, neonate N00.CNhs11217.1299-22I441.54
oviduct, adult pregnant day01.CNhs10500.988-6G635.80
pancreas, adult.CNhs10486.34-16E411.95
pancreas, embryo E14.CNhs11012.405-44F431.56
pancreas, embryo E15.CNhs11042.1556-45F225.09
pancreas, embryo E16.CNhs11003.460-26E523.01
pancreas, embryo E17.CNhs10599.1558-45G322.44
pancreas, embryo E18.CNhs10580.1535-43I717.83
pancreas, neonate N00.CNhs11105.645-26G921.97
pancreas, neonate N01.CNhs11138.1531-43D718.18
pancreas, neonate N02.CNhs11139.1539-43D827.09
pancreas, neonate N16.CNhs11136.787-43B618.96
pancreas, neonate N25.CNhs11094.1555-45E213.70
pancreas, neonate N30.CNhs11182.1548-44H518.56
pituitary gland, adult.CNhs10493.21-1G829.28
pituitary gland, embryo E12.CNhs11018.346-16E648.08
pituitary gland, embryo E13.CNhs11009.370-44C740.75
pituitary gland, embryo E14.CNhs11037.398-44A538.80
pituitary gland, embryo E15.CNhs10592.427-16B934.94
pituitary gland, embryo E16.CNhs11036.449-43F633.18
pituitary gland, embryo E17.CNhs11039.1265-44F532.75
pituitary gland, neonate N00.CNhs11190.1308-22E935.62
placenta, adult pregnant day10.CNhs10472.539-13I716.66
placenta, adult pregnant day17.CNhs10464.577-18G316.95
prostate, adult.CNhs10470.859-1F816.54
skin, adult.CNhs10492.30-1C322.09
skin, neonate N00.CNhs11124.650-25G436.49
skin, neonate N03.CNhs11215.662-22H329.67
skin, neonate N06.CNhs11097.693-20I530.92
skin, neonate N10.CNhs11108.762-6C425.28
small intestine, neonate N16.CNhs11114.790-21I118.95
spinal cord, adult.CNhs10505.24-13C927.63
spleen, adult.CNhs10465.25-2G219.82
spleen, embryo E16.CNhs11035.461-43C133.64
spleen, embryo E18.CNhs11011.1271-21F229.63
spleen, neonate N10.CNhs11116.752-24D124.11
spleen, neonate N20.CNhs11112.824-19H122.83
spleen, neonate N25.CNhs11099.1354-25G319.22
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C916.65
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D319.07
stomach, adult.CNhs10503.33-1H620.05
stomach, embryo E12.CNhs10588.356-43E339.23
stomach, embryo E15.CNhs10603.1252-16G834.77
stomach, embryo E16.CNhs11022.459-17D434.67
stomach, embryo E17.CNhs11006.1035-18D529.27
stomach, embryo E18.CNhs10999.1286-20C632.54
stomach, neonate N03.CNhs11193.1340-24B825.22
stomach, neonate N07.CNhs11210.718-18A928.43
stomach, neonate N25.CNhs11104.1355-25E420.68
stomach, neonate N30.CNhs11134.1386-42I121.78
submandibular gland, adult.CNhs10469.59-29C118.02
testis, adult.CNhs10504.57-7G512.40
testis, embryo E13.CNhs11031.389-23F540.37
testis, embryo E15.CNhs11034.443-27C528.29
testis, embryo E16.CNhs11033.470-26G534.42
testis, embryo E17.CNhs11029.486-18I531.39
testis, embryo E18.CNhs11027.503-18G529.57
testis, neonate N00.CNhs11189.1300-22B738.96
testis, neonate N07.CNhs11222.726-26I426.30
testis, neonate N10.CNhs11204.763-44D923.17
testis, neonate N20.CNhs11110.839-18H316.91
testis, neonate N30.CNhs11130.1391-42E216.13
thymus, adult.CNhs10471.38-12B533.50
thymus, embryo E14.CNhs11041.402-44I419.66
thymus, embryo E15.CNhs11005.430-45I224.14
thymus, embryo E16.CNhs11002.456-26C525.98
thymus, embryo E17.CNhs10581.478-18C124.17
thymus, embryo E18.CNhs10595.1273-19G431.59
thymus, neonate N02.CNhs11181.1541-43F830.77
thymus, neonate N03.CNhs11137.2104-43C734.26
thymus, neonate N06.CNhs11197.681-26C437.86
thymus, neonate N07.CNhs11211.713-19D336.88
thymus, neonate N10.CNhs11194.748-24E438.01
thymus, neonate N20.CNhs11186.820-7A235.86
thymus, neonate N25.CNhs11125.1362-25G738.87
thymus, neonate N30.CNhs11132.1393-42G243.71
tongue, adult.CNhs10499.32-1B424.94
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H35.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.15
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.88
urinary bladder, adult.CNhs10481.879-12E428.01
uterus, adult pregnant day19.CNhs10497.590-15F519.52
uterus, adult.CNhs10509.92-27E526.37
vagina, adult.CNhs10502.89-27D522.72
vesicular gland, adult.CNhs10491.51-27F827.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A129.93
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A234.06
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A332.08
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D731.62
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A426.72
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A519.64
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A625.65
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A724.32
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A821.75
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.67
whole body, embryo E11.CNhs11014.324-5I849.30
whole body, embryo E12.CNhs10587.857-27C954.27
whole body, embryo E13.CNhs10512.372-23H242.17
whole body, embryo E14.5.CNhs10578.420-27D229.90
whole body, embryo E14.CNhs10519.395-14B131.86
whole body, embryo E16.CNhs10514.453-14F225.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G523.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G524.52
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G527.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G526.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G526.11
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G527.92
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G528.75
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G530.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G530.61
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G528.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G523.41
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G524.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G527.20
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G527.38
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G526.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G530.17
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G528.85
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G524.27
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G527.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G526.99
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G532.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G526.57
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G527.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G517.40
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G524.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G524.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G527.42
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G524.48
whole body, embryo E17.5.CNhs10513.490-9F932.22
whole body, embryo E17.CNhs10517.475-3I538.97
whole body, embryo E18.CNhs10516.493-3B332.28
whole body, neonate N00.CNhs10525.657-19C235.45
whole body, neonate N01.CNhs10576.659-23C628.88
whole body, neonate N06.CNhs10515.692-21D123.82
whole body, neonate N10.CNhs10518.761-6B419.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron5.13e-1033
neuronal stem cell5.13e-1033
neuroblast5.13e-1033
electrically signaling cell5.13e-1033
electrically responsive cell2.86e-0739
electrically active cell2.86e-0739
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:117852559..117852640,-&oldid=4236800"