FFCP PHASE1:Mm9::chr5:138404139..138404159,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=118446 | |EntrezGene=118446 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2357 | |||
|TSSclassifier=NA | |||
|UniProt=Q921C1 | |UniProt=Q921C1 | ||
|association_with_transcript=27bp_to_ENSMUST00000077119,NM_080450,uc009aeg.1_5end | |||
|cluster_id=chr5:138404139..138404159,- | |||
|description=CAGE_peak_2_at_Gjc3_5end | |||
|id=chr5:138404139..138404159,- | |||
|ontology_enrichment_celltype=CL:0000107!9.47e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.08e-10,9;CL:0000221,1.08e-08,44;CL:0000133,1.08e-08,44;CL:0000540,1.62e-08,33;CL:0000047,1.62e-08,33;CL:0000031,1.62e-08,33;CL:0000404,1.62e-08,33;CL:0002319,5.49e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.91e-18!102;UBERON:0000924!1.91e-18!102;UBERON:0006601!1.91e-18!102;UBERON:0000073!7.59e-15!75;UBERON:0001016!7.59e-15!75;UBERON:0001017!9.69e-14!73;UBERON:0005743!9.69e-14!73;UBERON:0002346!2.09e-10!71;UBERON:0003075!2.09e-10!71;UBERON:0007284!2.09e-10!71;UBERON:0000010!6.09e-09!11;UBERON:0000033!8.48e-08!63;UBERON:0002410!9.47e-08!9;UBERON:0001049!1.62e-07!52;UBERON:0005068!1.62e-07!52;UBERON:0006241!1.62e-07!52;UBERON:0007135!1.62e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.53e-22,95;UBERON:0000924,3.53e-22,95;UBERON:0006601,3.53e-22,95;UBERON:0001016,2.02e-19,75;UBERON:0001017,6.59e-18,73;UBERON:0010371,7.86e-15,73;UBERON:0000010,9.29e-12,11;UBERON:0002346,2.19e-11,64;UBERON:0003075,2.19e-11,64;UBERON:0007284,2.19e-11,64;UBERON:0000073,1.93e-10,54;UBERON:0002410,4.08e-10,9;UBERON:0010314,5.80e-10,92;UBERON:0001049,1.80e-09,52;UBERON:0005068,1.80e-09,52;UBERON:0006241,1.80e-09,52;UBERON:0007135,1.80e-09,52;UBERON:0000955,3.59e-07,47;UBERON:0006238,3.59e-07,47;UBERON:0002616,9.99e-07,46 | |||
|phase1_expression=16.9757777931082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0.528990979272033,0,0,0,0,0,0,1.19840044207362,2.30530983192933,0,0,0,10.5690864229407,34.8972294703549,0.122490799214954,0,0,2.20231761998777,8.17198963745201,9.21639199537461,0.131886287730194,0,0,9.77140496504833,7.31591393041184,7.33431589328689,19.7401152267357,23.0642122894547,0.559198337475902,12.2676433199758,10.4288752947364,0,0,0,0,0,0,1.96622188184453,0,0,0,137.88570796137,0,0,0,0,0,0,0.45673551887624,0,1.03909497345377,0.173485326766136,0.608930956624282,1.38369298353635,1.3565037649736,5.52666923537813,0.376999773989026,0,0.433798070759735,0,5.82360659810673,1.98757366614354,3.87900202508178,0,23.4224637609238,28.2753054198164,0,0,0,0,9.13722900369418,8.6925114535539,0.125654352112864,4.34560800480691,4.09144731728529,14.9607392082883,13.6282660976916,0,1.24406970610093,0,1.05220927943237,0.130120442962704,0,0,0.150704817835715,0.340182495756639,3.84341160854549,4.02917415606834,3.88055056108524,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,3.2925141825271,0,0,0,0,0,0,0,0,0,0.154267112887378,0.465067889500816,1.3413670069981,0.233530684734339,0.329119699826961,0.492502392237286,0.648550476366846,1.16959989940266,1.53685080703735,0.268412837520744,5.25724871410318,0.102904612379284,0,0.264450566663544,0,0,0,0.80673409849337,0,0,0,0.658795818896044,1.50801125280162,0.596869416123452,0.779856348476481,1.79763881730844,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0.624075346229121,0,0,0,0,0,0.325929952884052,0.169745085775188,0,0.167506257441816,0.952174563544055,0.585400943573396,0.945810864637146,0.664394068946325,2.55127629851979,1.14704320301017,1.20879487306127,0,0,0,0,0.275936746304732,13.9679013289379,25.3177243039159,0,8.33154059774431,14.8288863125641,14.8366722832723,39.637905182835,48.5106659843681,52.1348897352802,45.8583979877909,17.4068601720205,15.4895604692995,16.602086673754,3.53453448063988,0,0.890328018336276,0.977321756121456,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,1.22974059177571,1.03371317267288,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0,0.36012218806262,0.129358683782755,0.428674070063185,0,1.07021290561242,1.97458824722545,2.74018454203139,0,0,1.10264199027481,2.63818004706368,4.03661066739764,4.82503399425247,3.81991500810037,3.93938159388147,0.291480836629851,15.9465759729038,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0.406638934253697,0.648032044930808,0.627264888043406,1.31017538247707,1.48350781023303,1.73572257023205,0.785267825952089,0.388844919875379,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0.864090018773596,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.240390899039938,0.295379054349154,1.11063094942962,0.685861259894999,0.604957110821043,0,0,0.116876902181569,3.40095575422817,0,0,0,1.15913756419314,0,0.183151624267265,1.2862102744744,0,6.21227026878773,4.14292712856459,2.86447756719698,1.89038500578056,1.37016503954128,2.2661816921691,2.02506750069542,2.2516060161211,3.17199686288943,2.07104124700728,0,0.399024873401031,0.170733605754134,0.243106717068294,0.628839487883947,0.551530525350042,1.33348036680969,1.64828045791115,1.28367683836726,0.505394423527595,1.77435509923168,1.50901073108861,0.936415074698824,1.79270426733634,1.26358031702349,1.42888107384922,1.15884325944855,0.77163688185482,0.412085900803307,0,1.02860775715625,1.06485483695602,1.66905332963125,1.16277133305863,1.2234219453993,1.35383372626682,0.914639864363863,0.526139422875686,1.35804113845862,1.12228454331548,0.949080144993393,1.0835493061312,0.818462086339379,0.929621047115796,1.35034627686799,0.999242311751784,3.04111090979031,3.00819475667618,10.1382815996487,22.2797333310711,21.7955765483196 | |phase1_expression=16.9757777931082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21112554392781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0.257259436035947,0,0,0,0.528990979272033,0,0,0,0,0,0,1.19840044207362,2.30530983192933,0,0,0,10.5690864229407,34.8972294703549,0.122490799214954,0,0,2.20231761998777,8.17198963745201,9.21639199537461,0.131886287730194,0,0,9.77140496504833,7.31591393041184,7.33431589328689,19.7401152267357,23.0642122894547,0.559198337475902,12.2676433199758,10.4288752947364,0,0,0,0,0,0,1.96622188184453,0,0,0,137.88570796137,0,0,0,0,0,0,0.45673551887624,0,1.03909497345377,0.173485326766136,0.608930956624282,1.38369298353635,1.3565037649736,5.52666923537813,0.376999773989026,0,0.433798070759735,0,5.82360659810673,1.98757366614354,3.87900202508178,0,23.4224637609238,28.2753054198164,0,0,0,0,9.13722900369418,8.6925114535539,0.125654352112864,4.34560800480691,4.09144731728529,14.9607392082883,13.6282660976916,0,1.24406970610093,0,1.05220927943237,0.130120442962704,0,0,0.150704817835715,0.340182495756639,3.84341160854549,4.02917415606834,3.88055056108524,0,0.189106080167819,0.175951124163949,0.43839146485515,0.278047249225598,0.696504333044333,3.2925141825271,0,0,0,0,0,0,0,0,0,0.154267112887378,0.465067889500816,1.3413670069981,0.233530684734339,0.329119699826961,0.492502392237286,0.648550476366846,1.16959989940266,1.53685080703735,0.268412837520744,5.25724871410318,0.102904612379284,0,0.264450566663544,0,0,0,0.80673409849337,0,0,0,0.658795818896044,1.50801125280162,0.596869416123452,0.779856348476481,1.79763881730844,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0,0,0.0701358198903186,0,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0.624075346229121,0,0,0,0,0,0.325929952884052,0.169745085775188,0,0.167506257441816,0.952174563544055,0.585400943573396,0.945810864637146,0.664394068946325,2.55127629851979,1.14704320301017,1.20879487306127,0,0,0,0,0.275936746304732,13.9679013289379,25.3177243039159,0,8.33154059774431,14.8288863125641,14.8366722832723,39.637905182835,48.5106659843681,52.1348897352802,45.8583979877909,17.4068601720205,15.4895604692995,16.602086673754,3.53453448063988,0,0.890328018336276,0.977321756121456,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0,1.22974059177571,1.03371317267288,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0,0.36012218806262,0.129358683782755,0.428674070063185,0,1.07021290561242,1.97458824722545,2.74018454203139,0,0,1.10264199027481,2.63818004706368,4.03661066739764,4.82503399425247,3.81991500810037,3.93938159388147,0.291480836629851,15.9465759729038,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0.406638934253697,0.648032044930808,0.627264888043406,1.31017538247707,1.48350781023303,1.73572257023205,0.785267825952089,0.388844919875379,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0.864090018773596,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.240390899039938,0.295379054349154,1.11063094942962,0.685861259894999,0.604957110821043,0,0,0.116876902181569,3.40095575422817,0,0,0,1.15913756419314,0,0.183151624267265,1.2862102744744,0,6.21227026878773,4.14292712856459,2.86447756719698,1.89038500578056,1.37016503954128,2.2661816921691,2.02506750069542,2.2516060161211,3.17199686288943,2.07104124700728,0,0.399024873401031,0.170733605754134,0.243106717068294,0.628839487883947,0.551530525350042,1.33348036680969,1.64828045791115,1.28367683836726,0.505394423527595,1.77435509923168,1.50901073108861,0.936415074698824,1.79270426733634,1.26358031702349,1.42888107384922,1.15884325944855,0.77163688185482,0.412085900803307,0,1.02860775715625,1.06485483695602,1.66905332963125,1.16277133305863,1.2234219453993,1.35383372626682,0.914639864363863,0.526139422875686,1.35804113845862,1.12228454331548,0.949080144993393,1.0835493061312,0.818462086339379,0.929621047115796,1.35034627686799,0.999242311751784,3.04111090979031,3.00819475667618,10.1382815996487,22.2797333310711,21.7955765483196 | ||
|short_description=p2@Gjc3 | |||
}} | }} |
Latest revision as of 15:12, 25 September 2015
Short description: | p2@Gjc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gjc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2357 |
Association with transcript: | 27bp_to_ENSMUST00000077119, NM_080450, uc009aeg.1_5end |
EntrezGene: | Gjc3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 4.08e-10 | 9 |
ectodermal cell | 1.08e-08 | 44 |
neurectodermal cell | 1.08e-08 | 44 |
neuron | 1.62e-08 | 33 |
neuronal stem cell | 1.62e-08 | 33 |
neuroblast | 1.62e-08 | 33 |
electrically signaling cell | 1.62e-08 | 33 |
neural cell | 5.49e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 3.53e-22 | 95 |
ectoderm | 3.53e-22 | 95 |
presumptive ectoderm | 3.53e-22 | 95 |
nervous system | 2.02e-19 | 75 |
central nervous system | 6.59e-18 | 73 |
ecto-epithelium | 7.86e-15 | 73 |
peripheral nervous system | 9.29e-12 | 11 |
neurectoderm | 2.19e-11 | 64 |
neural plate | 2.19e-11 | 64 |
presumptive neural plate | 2.19e-11 | 64 |
regional part of nervous system | 1.93e-10 | 54 |
autonomic nervous system | 4.08e-10 | 9 |
structure with developmental contribution from neural crest | 5.80e-10 | 92 |
neural tube | 1.80e-09 | 52 |
neural rod | 1.80e-09 | 52 |
future spinal cord | 1.80e-09 | 52 |
neural keel | 1.80e-09 | 52 |
brain | 3.59e-07 | 47 |
future brain | 3.59e-07 | 47 |
regional part of brain | 9.99e-07 | 46 |