Personal tools

FFCP PHASE1:Mm9::chr5:66542145..66542199,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr5:66542145..66542199,-
|DHSsupport=NA
|short_description=p3@Rbm47
|DPIdataset=NA
|description=CAGE_peak_3_at_Rbm47_5end
|association_with_transcript=0bp_to_ENSMUST00000132606_5end
|EntrezGene=245945
|EntrezGene=245945
|HGNC=
|HGNC=
|MCL_coexpression_id=887
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000132606_5end
|cluster_id=chr5:66542145..66542199,-
|description=CAGE_peak_3_at_Rbm47_5end
|id=chr5:66542145..66542199,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.54e-11!130;UBERON:0000925!1.54e-11!130;UBERON:0006595!1.54e-11!130;UBERON:0004921!7.81e-11!126;UBERON:0004185!7.81e-11!126;UBERON:0001007!9.67e-11!128;UBERON:0001555!9.67e-11!128;UBERON:0007026!9.67e-11!128;UBERON:0005177!7.10e-10!85;UBERON:0009569!9.18e-10!66;UBERON:0002100!1.28e-09!98;UBERON:0003104!2.42e-09!131;UBERON:0009142!2.42e-09!131;UBERON:0000466!3.17e-08!79;UBERON:0003064!5.53e-08!14;UBERON:0000160!3.98e-07!43;UBERON:0000077!6.35e-07!97;UBERON:0005256!6.70e-07!47;UBERON:0005409!7.79e-07!59
|ontology_enrichment_uberon_v019_2=UBERON:0005177,3.72e-12,79;UBERON:0002100,4.08e-11,90;UBERON:0009569,4.25e-09,66;UBERON:0004119,5.10e-09,118;UBERON:0000925,5.10e-09,118;UBERON:0006595,5.10e-09,118;UBERON:0004921,2.18e-08,114;UBERON:0001007,2.65e-08,116;UBERON:0001555,2.65e-08,116;UBERON:0007026,2.65e-08,116;UBERON:0003064,3.72e-08,14
|phase1_expression=6.56610273129655,8.02643437570531,5.0049916332849,11.1911758183527,8.5152274090879,3.52546471014969,3.27057696833736,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0.699561878128147,0.630924330716475,0.411343300817216,0,6.71841992193451,0.0992909512008853,0,5.27974995218242,2.98232065387321,3.44539178469012,6.46142994238612,4.09395342103189,5.32065574477847,6.80481350351813,5.76499327703792,0,0,0,3.17736781726402,4.65457007003779,2.6542016314108,2.09265815368454,3.1253413780952,1.57057123192139,0.588231488031014,2.73218193983378,0.971020706062307,1.6366586336825,1.72340783073175,7.89251034295231,2.34717403304412,1.09012578190223,6.15121311656521,10.1103547518627,2.09979632438044,0,0,0,0,1.54355661621568,2.0057340795713,0.515672092277442,0,0,0.633831403506179,3.72728985276045,8.89294796111139,16.1981949110652,10.8775299882367,7.104801149461,3.59520132622086,4.99483796918021,0,0.135005938331691,0,0.571301968807607,0.220868540951614,0,0,0,1.10115880999389,0,0.153606533256243,0.131886287730194,0,0,0,1.12552522006336,0.15279824777681,0.294628585473668,0.142371680799103,0,0.302904773332736,0.377857800533928,13.3337664802772,8.60423876981386,8.83962733820076,22.6675340487883,27.2906095328021,26.4335863387428,12.6399978118577,2.72688516124892,1.81850203222008,1.06001872353102,16.0561498545416,0,0,0,23.1645413881999,19.5087096415826,24.7706978057244,13.7020655662872,6.21450920753212,32.6572705942614,11.450031566565,26.1840311348441,33.2086316048724,28.9387469861035,26.2222816912622,39.8363094515071,18.539622580078,30.9442623808611,1.76922110389975,0.485300549842228,0.441683036920787,0.484875253135222,50.325775528893,1.17112318804619,1.04723353406728,7.91916871146633,0,0,0.127070227073065,0.299581278809645,0,0.125654352112864,0.347648640384553,0.255715457330331,0.20778804455956,0.162241263067758,3.97173519016234,12.6895110022295,41.6992551415563,139.733392308619,1.69156575851515,0.919608417733892,1.80062129805349,1.80845781402858,2.38127747029647,1.15302348256365,2.15513966487376,40.0990224645474,0.215567992932842,0.189106080167819,0.703804496655795,1.31517439456545,3.33656699070717,9.4028084960985,6.79081050146213,2.58744546864041,0,0.257347907114715,0,1.44988040774851,0.234526059981096,0.540186184383045,0.710234206755631,0.196764231747404,0,0.232533944750408,0.536546802799238,0.934122738937356,1.15191894939436,0.656669856316381,1.13496333364198,0.730999937126662,2.63460138349261,2.01309628140558,4.20579897128254,2.26390147234426,39.9806727410396,20.6271441997565,0.426576501070468,1.39342003116263,5.02583099156164,10.6892268050372,10.8965241483986,13.8864707062168,13.7613427847908,16.1404975629531,14.8287773192159,12.5342577385925,11.8928093142663,18.8752075817387,12.9682829924817,14.3381716743144,1.13800740571849,3.65595240351132,3.38123207019241,8.34970444165788,8.14600446104028,8.76697748628982,13.3429093332183,11.9564219863478,13.3448918665169,14.6842625066943,21.6410417773619,0.667380422864376,0.589676985339609,0.449724224769707,1.42002084971952,3.37648023653384,3.56476192493988,7.48009957372108,3.56697498905078,6.04035109013779,8.62609239164127,12.2806512730606,8.7370548472077,23.7424145270285,25.4744327201115,27.0168371963486,10.1614254591633,1.51593129416388,3.42226450528254,5.94107800213158,8.21415869009757,12.2279567932526,18.8054476299951,21.8549685600735,11.0344600874334,8.858587585951,10.6834695000516,9.66793556822854,14.3328534948693,15.0435020924772,7.53956419696361,8.15858525728064,144.086931994578,155.904261662174,0.321101179975584,0,0.163934945376675,3.7870639080656,0,0,0,0,0,0,0,0,0,0.321321316421807,34.0656204499845,2.67098405500883,3.25773918707152,12.3727592229402,59.7353122529833,4.12727081463468,6.34879469625977,7.54420319023592,5.61073596473468,10.1453598821496,16.0225541764297,5.45300594216258,5.70395805415554,19.2782422340848,34.7881408297496,40.2228618667929,5.44703369206061,2.88097750450096,4.78627129996192,4.71541477069503,4.96552654198366,6.24290861607247,5.92376474167636,6.08929898229199,15.9576761483323,28.1736654248881,67.7022182028733,16.488625294148,7.75029248140347,12.7260271598409,9.19167048824151,12.6388492803697,18.6547735443104,0.18542530201051,0.854354403989263,1.03193433981611,0.555583582109135,0.188368457004691,1.0935538217682,0.686334519619568,0,0.279902904647316,0.276399947608848,20.0480829783174,0.632671987162271,4.47302827679067,7.02034715341708,8.99079672862215,11.5732158785474,12.6772485601731,14.4643547519338,17.275892170946,40.4398716670394,131.723934374428,1.12738587736838,5.68162874967119,5.46013018508422,7.77804753376191,8.13706887909706,6.9272011451219,5.39843297770468,2.47388331203505,1.8874681996628,2.17425708743405,5.18454011264158,3.16011120628178,13.582589424441,10.0656738021531,6.49604114888975,6.62398773969681,5.56307793387542,4.56742708175882,4.28299628806274,3.02899349844443,3.58171991278499,2.21817607301049,4.67797827550812,3.36741445741153,2.80504565235765,21.9928472106755,17.9808622232992,9.86852422704233,15.7811539382234,28.2056807286998,23.2726269559466,20.696133542201,26.5816790058042,71.724810877057,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0.830298780673413,0.798049746802062,0.853668028770671,2.67417388775123,1.88651846365184,5.33146174505041,8.00088220085815,8.65347240403356,9.30665707816264,7.83361356467772,8.36481689637791,9.99719609346204,6.74218853783153,6.72264100251127,7.12199815049605,8.09699275181225,7.76424983830532,9.06673336179414,5.76920261124629,8.68473628792944,5.48590803816665,4.79184676630211,7.15308569841963,8.28474574804273,7.24642229198046,5.92302255241735,8.04883080640199,7.10288220882176,8.14824683075171,7.85599180320834,8.77899134118889,6.50129583678719,9.82154503607254,6.19747364743864,6.94463799532109,8.24374907195222,10.0590591631526,8.37997110788363,1.91288332068843,4.85301122062934,2.31867835620421
|phase1_expression=6.56610273129655,8.02643437570531,5.0049916332849,11.1911758183527,8.5152274090879,3.52546471014969,3.27057696833736,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0.699561878128147,0.630924330716475,0.411343300817216,0,6.71841992193451,0.0992909512008853,0,5.27974995218242,2.98232065387321,3.44539178469012,6.46142994238612,4.09395342103189,5.32065574477847,6.80481350351813,5.76499327703792,0,0,0,3.17736781726402,4.65457007003779,2.6542016314108,2.09265815368454,3.1253413780952,1.57057123192139,0.588231488031014,2.73218193983378,0.971020706062307,1.6366586336825,1.72340783073175,7.89251034295231,2.34717403304412,1.09012578190223,6.15121311656521,10.1103547518627,2.09979632438044,0,0,0,0,1.54355661621568,2.0057340795713,0.515672092277442,0,0,0.633831403506179,3.72728985276045,8.89294796111139,16.1981949110652,10.8775299882367,7.104801149461,3.59520132622086,4.99483796918021,0,0.135005938331691,0,0.571301968807607,0.220868540951614,0,0,0,1.10115880999389,0,0.153606533256243,0.131886287730194,0,0,0,1.12552522006336,0.15279824777681,0.294628585473668,0.142371680799103,0,0.302904773332736,0.377857800533928,13.3337664802772,8.60423876981386,8.83962733820076,22.6675340487883,27.2906095328021,26.4335863387428,12.6399978118577,2.72688516124892,1.81850203222008,1.06001872353102,16.0561498545416,0,0,0,23.1645413881999,19.5087096415826,24.7706978057244,13.7020655662872,6.21450920753212,32.6572705942614,11.450031566565,26.1840311348441,33.2086316048724,28.9387469861035,26.2222816912622,39.8363094515071,18.539622580078,30.9442623808611,1.76922110389975,0.485300549842228,0.441683036920787,0.484875253135222,50.325775528893,1.17112318804619,1.04723353406728,7.91916871146633,0,0,0.127070227073065,0.299581278809645,0,0.125654352112864,0.347648640384553,0.255715457330331,0.20778804455956,0.162241263067758,3.97173519016234,12.6895110022295,41.6992551415563,139.733392308619,1.69156575851515,0.919608417733892,1.80062129805349,1.80845781402858,2.38127747029647,1.15302348256365,2.15513966487376,40.0990224645474,0.215567992932842,0.189106080167819,0.703804496655795,1.31517439456545,3.33656699070717,9.4028084960985,6.79081050146213,2.58744546864041,0,0.257347907114715,0,1.44988040774851,0.234526059981096,0.540186184383045,0.710234206755631,0.196764231747404,0,0.232533944750408,0.536546802799238,0.934122738937356,1.15191894939436,0.656669856316381,1.13496333364198,0.730999937126662,2.63460138349261,2.01309628140558,4.20579897128254,2.26390147234426,39.9806727410396,20.6271441997565,0.426576501070468,1.39342003116263,5.02583099156164,10.6892268050372,10.8965241483986,13.8864707062168,13.7613427847908,16.1404975629531,14.8287773192159,12.5342577385925,11.8928093142663,18.8752075817387,12.9682829924817,14.3381716743144,1.13800740571849,3.65595240351132,3.38123207019241,8.34970444165788,8.14600446104028,8.76697748628982,13.3429093332183,11.9564219863478,13.3448918665169,14.6842625066943,21.6410417773619,0.667380422864376,0.589676985339609,0.449724224769707,1.42002084971952,3.37648023653384,3.56476192493988,7.48009957372108,3.56697498905078,6.04035109013779,8.62609239164127,12.2806512730606,8.7370548472077,23.7424145270285,25.4744327201115,27.0168371963486,10.1614254591633,1.51593129416388,3.42226450528254,5.94107800213158,8.21415869009757,12.2279567932526,18.8054476299951,21.8549685600735,11.0344600874334,8.858587585951,10.6834695000516,9.66793556822854,14.3328534948693,15.0435020924772,7.53956419696361,8.15858525728064,144.086931994578,155.904261662174,0.321101179975584,0,0.163934945376675,3.7870639080656,0,0,0,0,0,0,0,0,0,0.321321316421807,34.0656204499845,2.67098405500883,3.25773918707152,12.3727592229402,59.7353122529833,4.12727081463468,6.34879469625977,7.54420319023592,5.61073596473468,10.1453598821496,16.0225541764297,5.45300594216258,5.70395805415554,19.2782422340848,34.7881408297496,40.2228618667929,5.44703369206061,2.88097750450096,4.78627129996192,4.71541477069503,4.96552654198366,6.24290861607247,5.92376474167636,6.08929898229199,15.9576761483323,28.1736654248881,67.7022182028733,16.488625294148,7.75029248140347,12.7260271598409,9.19167048824151,12.6388492803697,18.6547735443104,0.18542530201051,0.854354403989263,1.03193433981611,0.555583582109135,0.188368457004691,1.0935538217682,0.686334519619568,0,0.279902904647316,0.276399947608848,20.0480829783174,0.632671987162271,4.47302827679067,7.02034715341708,8.99079672862215,11.5732158785474,12.6772485601731,14.4643547519338,17.275892170946,40.4398716670394,131.723934374428,1.12738587736838,5.68162874967119,5.46013018508422,7.77804753376191,8.13706887909706,6.9272011451219,5.39843297770468,2.47388331203505,1.8874681996628,2.17425708743405,5.18454011264158,3.16011120628178,13.582589424441,10.0656738021531,6.49604114888975,6.62398773969681,5.56307793387542,4.56742708175882,4.28299628806274,3.02899349844443,3.58171991278499,2.21817607301049,4.67797827550812,3.36741445741153,2.80504565235765,21.9928472106755,17.9808622232992,9.86852422704233,15.7811539382234,28.2056807286998,23.2726269559466,20.696133542201,26.5816790058042,71.724810877057,0.564751842617067,0,0,0.171853182343688,0,0,0,0,0,0,0.830298780673413,0.798049746802062,0.853668028770671,2.67417388775123,1.88651846365184,5.33146174505041,8.00088220085815,8.65347240403356,9.30665707816264,7.83361356467772,8.36481689637791,9.99719609346204,6.74218853783153,6.72264100251127,7.12199815049605,8.09699275181225,7.76424983830532,9.06673336179414,5.76920261124629,8.68473628792944,5.48590803816665,4.79184676630211,7.15308569841963,8.28474574804273,7.24642229198046,5.92302255241735,8.04883080640199,7.10288220882176,8.14824683075171,7.85599180320834,8.77899134118889,6.50129583678719,9.82154503607254,6.19747364743864,6.94463799532109,8.24374907195222,10.0590591631526,8.37997110788363,1.91288332068843,4.85301122062934,2.31867835620421
|short_description=p3@Rbm47
}}
}}

Latest revision as of 04:01, 26 September 2015

Short description:p3@Rbm47
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rbm47_5end
Coexpression cluster:MCL_coexpression_mm9:887
Association with transcript: 0bp_to_ENSMUST00000132606_5end
EntrezGene:Rbm47
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rbm47

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G76.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.03
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.19
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.72
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D15.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.98
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I16.46
GP2+ M cell, pool3.CNhs13240.11847-124I24.09
Ileum epithelium, pool1.CNhs13199.10252-104B95.32
Ileum epithelium, pool2.CNhs13232.10253-104C16.80
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.18
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.65
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F72.65
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.09
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.57
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H22.73
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.89
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.15
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.54
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.73
Mouse Meningeal cells, donor3.CNhs12109.11639-122D18.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C716.20
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E710.88
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D27.10
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.33
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C48.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C822.67
Mouse hepatocyte, donor6.CNhs13090.11822-124F427.29
Mouse hepatocyte, donor8.CNhs13091.11824-124F626.43
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.82
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G616.06
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G123.16
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G219.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G324.77
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B613.70
accessory axillary lymph node, adult.CNhs10475.1063-29H96.21
adrenal gland, adult.CNhs10508.49-24D732.66
adrenal gland, embryo E14.CNhs11038.406-44C511.45
adrenal gland, embryo E16.CNhs11004.1254-43D626.18
adrenal gland, embryo E17.CNhs11043.1263-45I133.21
adrenal gland, embryo E18.CNhs11026.1262-18F528.94
adrenal gland, neonate N00.CNhs11191.1311-23C126.22
adrenal gland, neonate N25.CNhs11223.1377-27I339.84
amnion, adult pregnant day17.5.CNhs10488.583-22A818.54
aorta, adult.CNhs10498.46-23H130.94
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H450.33
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H77.92
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.97
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A212.69
epididymis, adult.CNhs10490.58-23B241.70
eyeball, adult.CNhs10484.31-12G4139.73
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.38
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G82.16
eyeball, neonate N16.CNhs11188.777-19A240.10
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C49.40
forelimb, embryo E18.CNhs11008.1520-43B56.79
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.93
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D32.63
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I339.98
intestine, adult.CNhs10496.178-9A320.63
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D85.03
intestine, embryo E16.CNhs10585.463-22H410.69
intestine, embryo E17.CNhs10582.482-18D310.90
intestine, embryo E18.CNhs10526.1289-20F713.89
intestine, neonate N00.CNhs11126.644-26D113.76
intestine, neonate N01.CNhs11192.1322-23E916.14
intestine, neonate N06.CNhs11102.688-20B814.83
intestine, neonate N07.CNhs11095.720-20F212.53
intestine, neonate N10.CNhs11098.755-23A511.89
intestine, neonate N20.CNhs11187.827-18D118.88
intestine, neonate N25.CNhs11121.1352-25E312.97
intestine, neonate N30.CNhs11131.1384-42G114.34
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F83.66
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I28.35
kidney, embryo E18.CNhs11001.1288-20C78.15
kidney, neonate N00.CNhs11214.646-21G78.77
kidney, neonate N10.CNhs11206.758-6D513.34
kidney, neonate N20.CNhs11113.832-19I111.96
kidney, neonate N25.CNhs11122.1353-25F313.34
kidney, neonate N30.CNhs11203.1385-42H114.68
liver, adult pregnant day01.CNhs10466.508-5B221.64
liver, embryo E12.CNhs10601.355-15F80.67
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.42
liver, embryo E16.CNhs10523.462-17F53.38
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G47.48
liver, neonate N00.CNhs11117.641-24F43.57
liver, neonate N03.CNhs11123.1345-25G26.04
liver, neonate N06.CNhs11101.684-20A88.63
liver, neonate N07.CNhs11103.716-20H212.28
liver, neonate N10.CNhs11115.751-24B98.74
liver, neonate N20.CNhs11220.823-25A323.74
liver, neonate N25.CNhs11198.1368-26H125.47
liver, neonate N30.CNhs11106.1382-42D127.02
lung, adult.CNhs10474.28-22B110.16
lung, embryo E12.CNhs10522.354-16G21.52
lung, embryo E14.CNhs10604.404-26F83.42
lung, embryo E15.CNhs11020.432-17C55.94
lung, embryo E16.CNhs10998.458-17B68.21
lung, embryo E17.CNhs10605.480-44A612.23
lung, embryo E18.CNhs10583.1287-20I618.81
lung, neonate N00.CNhs11224.640-42C621.85
lung, neonate N06.CNhs11212.683-20E511.03
lung, neonate N07.CNhs11111.715-19A38.86
lung, neonate N10.CNhs11219.750-23E610.68
lung, neonate N20.CNhs11109.822-18A49.67
lung, neonate N25.CNhs11119.1359-25C714.33
lung, neonate N30.CNhs11133.1394-42H215.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.16
mammary gland, adult lactating day02.CNhs10480.595-22B6144.09
mammary gland, adult pregnant day19.CNhs10476.588-5H2155.90
medulla oblongata, adult.CNhs10477.17-12C20.32
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I734.07
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I43.26
oviduct, adult pregnant day01.CNhs10500.988-6G612.37
pancreas, adult.CNhs10486.34-16E459.74
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F26.35
pancreas, embryo E16.CNhs11003.460-26E57.54
pancreas, embryo E17.CNhs10599.1558-45G35.61
pancreas, embryo E18.CNhs10580.1535-43I710.15
pancreas, neonate N00.CNhs11105.645-26G916.02
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B619.28
pancreas, neonate N25.CNhs11094.1555-45E234.79
pancreas, neonate N30.CNhs11182.1548-44H540.22
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C74.79
pituitary gland, embryo E14.CNhs11037.398-44A54.72
pituitary gland, embryo E15.CNhs10592.427-16B94.97
pituitary gland, embryo E16.CNhs11036.449-43F66.24
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E96.09
placenta, adult pregnant day10.CNhs10472.539-13I715.96
placenta, adult pregnant day17.CNhs10464.577-18G328.17
prostate, adult.CNhs10470.859-1F867.70
skin, adult.CNhs10492.30-1C316.49
skin, neonate N00.CNhs11124.650-25G47.75
skin, neonate N03.CNhs11215.662-22H312.73
skin, neonate N06.CNhs11097.693-20I59.19
skin, neonate N10.CNhs11108.762-6C412.64
small intestine, neonate N16.CNhs11114.790-21I118.65
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H620.05
stomach, embryo E12.CNhs10588.356-43E30.63
stomach, embryo E15.CNhs10603.1252-16G84.47
stomach, embryo E16.CNhs11022.459-17D47.02
stomach, embryo E17.CNhs11006.1035-18D58.99
stomach, embryo E18.CNhs10999.1286-20C611.57
stomach, neonate N03.CNhs11193.1340-24B812.68
stomach, neonate N07.CNhs11210.718-18A914.46
stomach, neonate N25.CNhs11104.1355-25E417.28
stomach, neonate N30.CNhs11134.1386-42I140.44
submandibular gland, adult.CNhs10469.59-29C1131.72
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F55.68
testis, embryo E15.CNhs11034.443-27C55.46
testis, embryo E16.CNhs11033.470-26G57.78
testis, embryo E17.CNhs11029.486-18I58.14
testis, embryo E18.CNhs11027.503-18G56.93
testis, neonate N00.CNhs11189.1300-22B75.40
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D91.89
testis, neonate N20.CNhs11110.839-18H32.17
testis, neonate N30.CNhs11130.1391-42E25.18
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I413.58
thymus, embryo E15.CNhs11005.430-45I210.07
thymus, embryo E16.CNhs11002.456-26C56.50
thymus, embryo E17.CNhs10581.478-18C16.62
thymus, embryo E18.CNhs10595.1273-19G45.56
thymus, neonate N02.CNhs11181.1541-43F84.57
thymus, neonate N03.CNhs11137.2104-43C74.28
thymus, neonate N06.CNhs11197.681-26C43.03
thymus, neonate N07.CNhs11211.713-19D33.58
thymus, neonate N10.CNhs11194.748-24E42.22
thymus, neonate N20.CNhs11186.820-7A24.68
thymus, neonate N25.CNhs11125.1362-25G73.37
thymus, neonate N30.CNhs11132.1393-42G22.81
tongue, adult.CNhs10499.32-1B421.99
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H317.98
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.87
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G515.78
urinary bladder, adult.CNhs10481.879-12E428.21
uterus, adult pregnant day19.CNhs10497.590-15F523.27
uterus, adult.CNhs10509.92-27E520.70
vagina, adult.CNhs10502.89-27D526.58
vesicular gland, adult.CNhs10491.51-27F871.72
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F25.33
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.31
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.72
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.12
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.76
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.07
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.79
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G58.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.25
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.92
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.05
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.15
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.86
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.50
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.20
whole body, embryo E17.5.CNhs10513.490-9F96.94
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B310.06
whole body, neonate N00.CNhs10525.657-19C28.38
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D14.85
whole body, neonate N10.CNhs10518.761-6B42.32





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element3.72e-1279
trunk4.08e-1190
subdivision of trunk4.25e-0966
endoderm-derived structure5.10e-09118
endoderm5.10e-09118
presumptive endoderm5.10e-09118
subdivision of digestive tract2.18e-08114
digestive system2.65e-08116
digestive tract2.65e-08116
primitive gut2.65e-08116
intermediate mesoderm3.72e-0814
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:66542145..66542199,-&oldid=4231891"