FFCP PHASE1:Mm9::chr6:51419835..51419853,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr6:51419835..51419853,- to FFCP PHASE1:Mm9::chr6:51419835..51419853,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100045191,53379 | |EntrezGene=100045191,53379 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=509 | |||
|TSSclassifier=NA | |||
|UniProt=O88569 | |UniProt=O88569 | ||
|association_with_transcript=39bp_to_ENSMUST00000069949,ENSMUST00000114459,NM_016806,NM_182650,uc009bxn.1,uc009bxo.1,uc009bxp.1,uc009bxq.1,uc012elw.1,uc012elx.1_5end | |||
|cluster_id=chr6:51419835..51419853,- | |||
|description=CAGE_peak_1_at_Hnrnpa2b1_5end,CAGE_peak_1_at_LOC100045191_5end | |||
|id=chr6:51419835..51419853,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.23e-10!29;UBERON:0001048!1.08e-08!147;UBERON:0005057!1.41e-08!51;UBERON:0002370!6.96e-08!23;UBERON:0000974!6.96e-08!23;UBERON:0004807!6.96e-08!23;UBERON:0005058!6.96e-08!23;UBERON:0003351!6.96e-08!23;UBERON:0009113!6.96e-08!23;UBERON:0003295!6.96e-08!23;UBERON:0009722!6.96e-08!23;UBERON:0005562!6.96e-08!23;UBERON:0007690!6.96e-08!23;UBERON:0003408!1.89e-07!24;UBERON:0006562!3.05e-07!24;UBERON:0001557!3.05e-07!24;UBERON:0001042!3.05e-07!24;UBERON:0008814!3.05e-07!24;UBERON:0009145!3.05e-07!24;UBERON:0002405!5.89e-07!70;UBERON:0002193!6.13e-07!48;UBERON:0002390!7.67e-07!45;UBERON:0003061!7.67e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.13e-10,43;UBERON:0004177,5.23e-10,29;UBERON:0005057,5.23e-10,29;UBERON:0001048,1.66e-09,134;UBERON:0007811,1.30e-08,36;UBERON:0001041,5.79e-08,80;UBERON:0002370,6.96e-08,23;UBERON:0000974,6.96e-08,23;UBERON:0004807,6.96e-08,23;UBERON:0005058,6.96e-08,23;UBERON:0003351,6.96e-08,23;UBERON:0009113,6.96e-08,23;UBERON:0003295,6.96e-08,23;UBERON:0009722,6.96e-08,23;UBERON:0005562,6.96e-08,23;UBERON:0007690,6.96e-08,23;UBERON:0003408,1.89e-07,24;UBERON:0006562,3.05e-07,24;UBERON:0001557,3.05e-07,24;UBERON:0001042,3.05e-07,24;UBERON:0008814,3.05e-07,24;UBERON:0009145,3.05e-07,24;UBERON:0002193,6.13e-07,48;UBERON:0002405,6.13e-07,48;UBERON:0002390,7.67e-07,45;UBERON:0003061,7.67e-07,45 | |||
|phase1_expression=762.308512218819,379.685243511625,299.389499518315,419.215396871266,368.158361510565,497.426282674929,565.576202881768,777.709777088614,1544.02991583733,1537.8039379355,1184.99955808872,970.348542019272,842.478791991463,797.274070061256,757.824708130633,913.770881730284,1067.53142602355,702.849704418154,742.200429107864,723.159966663844,358.712597857212,970.271175135051,1230.25100684439,619.330668633277,614.128645416814,374.973472567108,468.238289824914,544.711276229927,597.053583931927,513.637404450739,588.251044768523,261.632637465368,242.335526308321,190.178017218526,652.804660637881,653.302156258875,593.928657367232,731.593290528115,875.095585866657,1003.59501719777,752.936304679698,743.836533119747,798.664530736248,380.963771194097,352.284835987813,437.208363649125,121.270658373946,217.371080911305,109.623405184501,161.182386332581,244.416292157883,153.81524387052,987.903984467952,988.668599561462,898.378725107806,473.871881178214,424.929091429176,359.939120409655,451.165707716903,413.141954811458,373.960528068646,125.372476865579,138.729988193338,114.737213953378,108.775299882367,116.51873885116,95.8720353658895,142.160772968975,780.782780682837,628.317636995688,627.399359711173,177.96056328357,216.892907214484,691.58305236763,581.973700022731,479.832206610431,151.959915779156,295.723875005295,335.015849031867,413.199739458697,459.542433814904,487.574914841127,256.84835908127,246.490023193876,324.237881782391,412.774648248608,471.535006806629,490.976140303842,530.083353332288,520.914763816073,548.133748134873,486.999914371465,373.304262205555,498.685749073343,472.387455484455,477.148634758662,517.256799345242,654.793299344898,560.358411928388,547.676340491027,717.597223762187,450.425935724256,420.428645515965,305.758682355932,657.91627363308,621.491750010417,701.162405235504,493.388544266058,1318.25276564775,489.413732496727,689.777659222156,670.128517765023,523.727794268509,639.06399594312,530.207480474893,442.220734889128,410.590841406795,689.883531864898,1006.68680811896,664.538219583957,745.340124803828,789.861787357277,892.816536234805,430.973333200997,364.227823148598,586.529398758926,950.613197829971,1292.79038529079,1009.06467318721,398.742682095638,470.768120300367,547.727320859976,372.679342492241,329.361509041466,387.52470310358,382.72713957684,552.376709524116,711.607871889732,469.0534396529,534.522313951644,1324.3658684744,1133.18747275259,932.541770261904,1024.34064682936,802.082288495004,1152.63914140279,819.04677437659,571.475745962486,1022.43899048047,1252.63867503163,1118.87319855855,833.820566154495,962.321529569794,770.682044513555,728.46876288412,825.793173029928,1715.50681660623,1575.7412352634,984.910688905124,907.003757932963,992.045233720037,872.580749840078,872.87784010267,852.579416161501,864.512900620868,848.516364394238,744.458688883943,632.634624945324,688.847531737829,765.184550072663,615.474402072137,672.666142143954,706.512271006601,557.761876368105,447.707300493027,592.52475807992,408.397615767974,540.008057126957,1147.70407613009,1039.49134324732,886.737001357324,871.071142848216,739.629373828039,676.632552082373,544.759362653099,474.003591695703,560.980186042202,587.319505465477,577.678590133953,532.101089923299,644.523664726338,563.370662036605,514.569015285711,1042.40342905117,1027.89454933849,967.140155937397,825.84969035975,656.681681633053,672.204389630855,642.842194451167,647.933749801354,566.639776728908,521.460171046295,1034.77334565122,1082.84350407864,1095.97793576378,1049.8011281855,935.04384836012,905.70415478651,766.134814031509,549.152013087045,884.911434705187,1746.78370930736,804.196587911636,734.536682511676,691.055810063298,670.587531744908,629.106351857831,509.364545289329,1105.87187909255,1180.35532436959,1061.58576643803,1022.78010204129,873.880145073953,662.951539867548,487.443852348781,885.121334156262,717.545594462031,600.825568301411,530.753276364275,565.02526066521,441.17962867361,526.26158094806,518.34211667923,695.846446321936,691.221549493355,361.078276882544,339.562256057613,654.428301943688,654.909585168144,676.765130647871,744.176246629393,856.954276181074,758.4869647014,752.613921050327,680.232903485564,708.01391722939,689.431568812785,826.942031464127,500.939932301597,627.94293696138,529.210974099083,494.687695556811,521.140618470239,363.721679051498,856.044523082465,757.018186639737,806.098110876709,459.489745322482,612.718249852247,474.215917963686,727.430992684489,706.577803958518,599.205693046307,422.728620385745,408.41675126282,517.127761140004,1043.99422319354,566.979111019813,644.082790269935,802.109876764003,634.992990663371,580.858042725487,193.639707636885,561.334725688395,333.211847468789,523.53441698248,779.417317654376,634.070803634821,760.003167019692,636.970827600736,676.096366049907,564.015418878761,347.116165363674,809.24449145863,795.827762866186,1033.01507366825,1234.37849875174,1245.83119144942,889.031981080547,953.409013835534,970.423370412245,944.596820953237,687.362844970882,1149.24866468026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| |phase1_expression=762.308512218819,379.685243511625,299.389499518315,419.215396871266,368.158361510565,497.426282674929,565.576202881768,777.709777088614,1544.02991583733,1537.8039379355,1184.99955808872,970.348542019272,842.478791991463,797.274070061256,757.824708130633,913.770881730284,1067.53142602355,702.849704418154,742.200429107864,723.159966663844,358.712597857212,970.271175135051,1230.25100684439,619.330668633277,614.128645416814,374.973472567108,468.238289824914,544.711276229927,597.053583931927,513.637404450739,588.251044768523,261.632637465368,242.335526308321,190.178017218526,652.804660637881,653.302156258875,593.928657367232,731.593290528115,875.095585866657,1003.59501719777,752.936304679698,743.836533119747,798.664530736248,380.963771194097,352.284835987813,437.208363649125,121.270658373946,217.371080911305,109.623405184501,161.182386332581,244.416292157883,153.81524387052,987.903984467952,988.668599561462,898.378725107806,473.871881178214,424.929091429176,359.939120409655,451.165707716903,413.141954811458,373.960528068646,125.372476865579,138.729988193338,114.737213953378,108.775299882367,116.51873885116,95.8720353658895,142.160772968975,780.782780682837,628.317636995688,627.399359711173,177.96056328357,216.892907214484,691.58305236763,581.973700022731,479.832206610431,151.959915779156,295.723875005295,335.015849031867,413.199739458697,459.542433814904,487.574914841127,256.84835908127,246.490023193876,324.237881782391,412.774648248608,471.535006806629,490.976140303842,530.083353332288,520.914763816073,548.133748134873,486.999914371465,373.304262205555,498.685749073343,472.387455484455,477.148634758662,517.256799345242,654.793299344898,560.358411928388,547.676340491027,717.597223762187,450.425935724256,420.428645515965,305.758682355932,657.91627363308,621.491750010417,701.162405235504,493.388544266058,1318.25276564775,489.413732496727,689.777659222156,670.128517765023,523.727794268509,639.06399594312,530.207480474893,442.220734889128,410.590841406795,689.883531864898,1006.68680811896,664.538219583957,745.340124803828,789.861787357277,892.816536234805,430.973333200997,364.227823148598,586.529398758926,950.613197829971,1292.79038529079,1009.06467318721,398.742682095638,470.768120300367,547.727320859976,372.679342492241,329.361509041466,387.52470310358,382.72713957684,552.376709524116,711.607871889732,469.0534396529,534.522313951644,1324.3658684744,1133.18747275259,932.541770261904,1024.34064682936,802.082288495004,1152.63914140279,819.04677437659,571.475745962486,1022.43899048047,1252.63867503163,1118.87319855855,833.820566154495,962.321529569794,770.682044513555,728.46876288412,825.793173029928,1715.50681660623,1575.7412352634,984.910688905124,907.003757932963,992.045233720037,872.580749840078,872.87784010267,852.579416161501,864.512900620868,848.516364394238,744.458688883943,632.634624945324,688.847531737829,765.184550072663,615.474402072137,672.666142143954,706.512271006601,557.761876368105,447.707300493027,592.52475807992,408.397615767974,540.008057126957,1147.70407613009,1039.49134324732,886.737001357324,871.071142848216,739.629373828039,676.632552082373,544.759362653099,474.003591695703,560.980186042202,587.319505465477,577.678590133953,532.101089923299,644.523664726338,563.370662036605,514.569015285711,1042.40342905117,1027.89454933849,967.140155937397,825.84969035975,656.681681633053,672.204389630855,642.842194451167,647.933749801354,566.639776728908,521.460171046295,1034.77334565122,1082.84350407864,1095.97793576378,1049.8011281855,935.04384836012,905.70415478651,766.134814031509,549.152013087045,884.911434705187,1746.78370930736,804.196587911636,734.536682511676,691.055810063298,670.587531744908,629.106351857831,509.364545289329,1105.87187909255,1180.35532436959,1061.58576643803,1022.78010204129,873.880145073953,662.951539867548,487.443852348781,885.121334156262,717.545594462031,600.825568301411,530.753276364275,565.02526066521,441.17962867361,526.26158094806,518.34211667923,695.846446321936,691.221549493355,361.078276882544,339.562256057613,654.428301943688,654.909585168144,676.765130647871,744.176246629393,856.954276181074,758.4869647014,752.613921050327,680.232903485564,708.01391722939,689.431568812785,826.942031464127,500.939932301597,627.94293696138,529.210974099083,494.687695556811,521.140618470239,363.721679051498,856.044523082465,757.018186639737,806.098110876709,459.489745322482,612.718249852247,474.215917963686,727.430992684489,706.577803958518,599.205693046307,422.728620385745,408.41675126282,517.127761140004,1043.99422319354,566.979111019813,644.082790269935,802.109876764003,634.992990663371,580.858042725487,193.639707636885,561.334725688395,333.211847468789,523.53441698248,779.417317654376,634.070803634821,760.003167019692,636.970827600736,676.096366049907,564.015418878761,347.116165363674,809.24449145863,795.827762866186,1033.01507366825,1234.37849875174,1245.83119144942,889.031981080547,953.409013835534,970.423370412245,944.596820953237,687.362844970882,1149.24866468026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| ||
|short_description=p1@Hnrnpa2b1,p1@LOC100045191 | |||
}} | }} |
Latest revision as of 12:38, 1 October 2015
Short description: | p1@Hnrnpa2b1, p1@LOC100045191 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hnrnpa2b1_5end, CAGE_peak_1_at_LOC100045191_5end |
Coexpression cluster: | MCL_coexpression_mm9:509 |
Association with transcript: | 39bp_to_ENSMUST00000069949, ENSMUST00000114459, NM_016806, NM_182650, uc009bxn.1, uc009bxo.1, uc009bxp.1, uc009bxq.1, uc012elw.1, uc012elx.1_5end |
EntrezGene: | 100045191,53379 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anterior region of body | 1.13e-10 | 43 |
hemopoietic organ | 5.23e-10 | 29 |
immune organ | 5.23e-10 | 29 |
primordium | 1.66e-09 | 134 |
craniocervical region | 1.30e-08 | 36 |
foregut | 5.79e-08 | 80 |
thymus | 6.96e-08 | 23 |
neck | 6.96e-08 | 23 |
respiratory system epithelium | 6.96e-08 | 23 |
hemolymphoid system gland | 6.96e-08 | 23 |
pharyngeal epithelium | 6.96e-08 | 23 |
thymic region | 6.96e-08 | 23 |
pharyngeal gland | 6.96e-08 | 23 |
entire pharyngeal arch endoderm | 6.96e-08 | 23 |
thymus primordium | 6.96e-08 | 23 |
early pharyngeal endoderm | 6.96e-08 | 23 |
gland of gut | 1.89e-07 | 24 |
pharynx | 3.05e-07 | 24 |
upper respiratory tract | 3.05e-07 | 24 |
chordate pharynx | 3.05e-07 | 24 |
pharyngeal arch system | 3.05e-07 | 24 |
pharyngeal region of foregut | 3.05e-07 | 24 |
hemolymphoid system | 6.13e-07 | 48 |
immune system | 6.13e-07 | 48 |
hematopoietic system | 7.67e-07 | 45 |
blood island | 7.67e-07 | 45 |