FFCP PHASE1:Mm9::chr6:78330694..78330709,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr6:78330694..78330709,+ to FFCP PHASE1:Mm9::chr6:78330694..78330709,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19694 | |EntrezGene=19694 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=460 | |||
|TSSclassifier=NA | |||
|UniProt=O09037,Q794C6 | |UniProt=O09037,Q794C6 | ||
|association_with_transcript=0bp_to_ENSMUST00000101272,NM_011259,uc009cjy.1_5end | |||
|cluster_id=chr6:78330694..78330709,+ | |||
|description=CAGE_peak_1_at_Reg3a_5end | |||
|id=chr6:78330694..78330709,+ | |||
|ontology_enrichment_celltype=CL:0002563!2.76e-14!9;CL:0002251!2.76e-14!9;CL:0000239!6.43e-13!6;CL:0000677!6.43e-13!6;CL:0000212!6.43e-13!6;CL:0000584!6.43e-13!6;CL:0000075!5.68e-11!7;CL:0000066!1.52e-08!25;CL:0002076!4.90e-08!15;CL:0000473!1.11e-07!3;CL:0000627!1.11e-07!3;CL:0000682!1.11e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.58e-13,6;CL:0000677,4.58e-13,6;CL:0000584,4.58e-13,6;CL:0000075,3.57e-11,7;CL:0000682,1.86e-10,3;CL:0002563,1.21e-08,9;CL:0002251,1.21e-08,9;CL:0000066,4.22e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.11e-33!43;UBERON:0005409!1.34e-28!59;UBERON:0000344!6.45e-27!15;UBERON:0001242!1.34e-22!13;UBERON:0000060!1.34e-22!13;UBERON:0001262!1.34e-22!13;UBERON:0004786!1.34e-22!13;UBERON:0002108!4.84e-16!16;UBERON:0004923!1.44e-15!24;UBERON:0001007!1.97e-14!128;UBERON:0001555!1.97e-14!128;UBERON:0007026!1.97e-14!128;UBERON:0003350!2.76e-14!9;UBERON:0004808!2.76e-14!9;UBERON:0001277!2.76e-14!9;UBERON:0004119!4.33e-14!130;UBERON:0000925!4.33e-14!130;UBERON:0006595!4.33e-14!130;UBERON:0004921!2.10e-12!126;UBERON:0004185!2.10e-12!126;UBERON:0000485!1.92e-11!11;UBERON:0001264!1.02e-08!12;UBERON:0003922!1.02e-08!12;UBERON:0002114!1.02e-08!12;UBERON:0003923!1.02e-08!12;UBERON:0003924!1.02e-08!12;UBERON:0003921!1.02e-08!12;UBERON:0000331!5.63e-08!3;UBERON:0002116!5.63e-08!3;UBERON:0001204!5.63e-08!3;UBERON:0001168!5.63e-08!3;UBERON:0001045!5.84e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.33e-24,15;UBERON:0000160,1.51e-24,31;UBERON:0001242,6.44e-19,13;UBERON:0001262,6.44e-19,13;UBERON:0004786,6.44e-19,13;UBERON:0005409,3.74e-17,47;UBERON:0004923,1.24e-14,24;UBERON:0002108,3.38e-14,4;UBERON:0000331,6.93e-11,3;UBERON:0002116,6.93e-11,3;UBERON:0001204,6.93e-11,3;UBERON:0001168,6.93e-11,3;UBERON:0003350,1.21e-08,9;UBERON:0004808,1.21e-08,9;UBERON:0001277,1.21e-08,9;UBERON:0001962,7.82e-08,2;UBERON:0001961,7.82e-08,2;UBERON:0001744,7.82e-08,2;UBERON:0000485,4.96e-07,11 | |||
|phase1_expression=0,3.14077866875425,5.0049916332849,4.23449895829562,10.5188103288733,0.16787927191189,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.27956052201759,8.25873411841812,6.89078356938024,5.59990595006797,6.89507944594845,10.0712412311878,7.30887376303799,7.53883736228036,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.45191104271788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,5.61711931072457,12.6936271998501,0,0,0,0,0,0,11.8632265386128,0,0,0,0.779856348476481,17.0775687644302,4.97117514711797,4.58024928485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5843193675948,0,0,0,0,0,0.516856586336442,0.363533729477506,0.712994756769443,98.6034684759746,2047.22937852648,5.15677716240934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5740418314925,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,3.14077866875425,5.0049916332849,4.23449895829562,10.5188103288733,0.16787927191189,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.27956052201759,8.25873411841812,6.89078356938024,5.59990595006797,6.89507944594845,10.0712412311878,7.30887376303799,7.53883736228036,0,0,0,0.288851619751275,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.45191104271788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,5.61711931072457,12.6936271998501,0,0,0,0,0,0,11.8632265386128,0,0,0,0.779856348476481,17.0775687644302,4.97117514711797,4.58024928485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5843193675948,0,0,0,0,0,0.516856586336442,0.363533729477506,0.712994756769443,98.6034684759746,2047.22937852648,5.15677716240934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.5740418314925,0,0,0,0,0,0,0,0,0,0,2.86401185404534,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@Reg3a | |||
}} | }} |
Latest revision as of 18:13, 1 October 2015
Short description: | p1@Reg3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Reg3a_5end |
Coexpression cluster: | MCL_coexpression_mm9:460 |
Association with transcript: | 0bp_to_ENSMUST00000101272, NM_011259, uc009cjy.1_5end |
EntrezGene: | Reg3a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.58e-13 | 6 |
gut absorptive cell | 4.58e-13 | 6 |
enterocyte | 4.58e-13 | 6 |
columnar/cuboidal epithelial cell | 3.57e-11 | 7 |
M cell of gut | 1.86e-10 | 3 |
intestinal epithelial cell | 1.21e-08 | 9 |
epithelial cell of alimentary canal | 1.21e-08 | 9 |
epithelial cell | 4.22e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.33e-24 | 15 |
intestine | 1.51e-24 | 31 |
intestinal mucosa | 6.44e-19 | 13 |
wall of intestine | 6.44e-19 | 13 |
gastrointestinal system mucosa | 6.44e-19 | 13 |
gastrointestinal system | 3.74e-17 | 47 |
organ component layer | 1.24e-14 | 24 |
small intestine | 3.38e-14 | 4 |
ileal mucosa | 6.93e-11 | 3 |
ileum | 6.93e-11 | 3 |
mucosa of small intestine | 6.93e-11 | 3 |
wall of small intestine | 6.93e-11 | 3 |
epithelium of mucosa | 1.21e-08 | 9 |
gastrointestinal system epithelium | 1.21e-08 | 9 |
intestinal epithelium | 1.21e-08 | 9 |
gut-associated lymphoid tissue | 7.82e-08 | 2 |
mucosa-associated lymphoid tissue | 7.82e-08 | 2 |
lymphoid tissue | 7.82e-08 | 2 |
simple columnar epithelium | 4.96e-07 | 11 |