FFCP PHASE1:Mm9::chr7:104548635..104548646,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:104548635..104548646,+ to FFCP PHASE1:Mm9::chr7:104548635..104548646,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=635087,675851,68197 | |EntrezGene=635087,675851,68197 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=79 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=22bp_to_ENSMUST00000149122_5end | |||
|cluster_id=chr7:104548635..104548646,+ | |||
|description=CAGE_peak_2_at_LOC635087_5end,CAGE_peak_2_at_LOC675851_5end,CAGE_peak_2_at_Ndufc2_5end | |||
|id=chr7:104548635..104548646,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!3.36e-08!114;UBERON:0004111!6.04e-07!122;UBERON:0001049!8.01e-07!52;UBERON:0005068!8.01e-07!52;UBERON:0006241!8.01e-07!52;UBERON:0007135!8.01e-07!52;UBERON:0000955!9.62e-07!50;UBERON:0006238!9.62e-07!50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.08e-08,92;UBERON:0000025,4.72e-08,114;UBERON:0000073,4.30e-07,54;UBERON:0004111,8.13e-07,122;UBERON:0001049,8.83e-07,52;UBERON:0005068,8.83e-07,52;UBERON:0006241,8.83e-07,52;UBERON:0007135,8.83e-07,52 | |||
|phase1_expression=1.92178616525753,2.79180326111489,1.81999695755814,1.51232105653415,1.50268718983904,1.34303417529512,1.63528848416868,0.903863264091034,1.54867594366833,3.27690336850791,0.68487187290202,4.14815226775749,0.684802919724823,1.48614684112296,0.333109761815663,0.404950534779652,0,0.788655413395594,0.274228867211478,0.42438965179803,2.63634199468316,0.794327609607082,0.783599367416806,2.3998863419011,2.2940928106717,4.59385571292016,3.4460959692726,1.939241094173,2.09025761402011,3.78045194639896,2.21730510655305,0.635030673459631,0,0,1.73310971850765,2.1610503896604,3.06254034393554,0,0,0,1.17646297606203,0,0,0.881277725829041,0.506884656097573,0.367093504323363,1.56478268869608,4.36050312760893,6.15121311656521,4.6663175777828,1.25987779462826,1.43752564364972,1.17447824240415,0,0.336093799142464,0.771778308107841,0.573066879877513,0,3.43937983461316,2.11596391708813,3.1691570175309,1.35537812827653,1.77858959222228,0.899899717281399,2.96659908770092,0.7104801149461,4.19440154725767,2.68952813725088,1.76272340924412,1.4850653216486,1.89292465216244,4.57041575046086,4.19650227808066,1.5923803897944,0.766763768145891,1.83843757322004,2.20231761998777,5.36286819957788,4.91540906419979,2.63772575460388,3.38504281328916,5.2091337055676,5.02529398202486,7.31591393041184,4.27835093775068,2.06240009831567,1.99320353118744,2.79599168737951,0.681535739998656,0.831287161174641,1.15945795480671,4.30211938490693,2.719885334831,1.07940638327563,8.4470934268197,3.58421509677868,2.24711072210803,0.511290967734173,1.03914401841148,1.06001872353102,0.985903938436763,0,0,0,1.08245520505607,1.01343946190039,0.505524445014783,2.62622923353838,0.776813650941515,1.03909497345377,1.73485326766136,1.82679286987285,1.38369298353635,3.46662073271032,3.05730638552832,5.40366342717605,0.247194967734374,33.1132527346598,0.884610551949874,4.52947179852746,3.5334642953663,0.484875253135222,0,4.09893115816166,4.1889341362691,1.53274233125155,1.67741174308288,1.19980546198682,1.14363204365758,4.04434726393021,3.20250421973039,1.38219787324151,3.47648640384553,5.37002460393694,6.64921742590592,3.24482526135515,0.81471491080253,1.99051152976149,2.77995034277042,0.841767423545896,1.17108398666433,0.459804208866946,1.26043490863744,1.50704817835715,0.748401490664606,0.384341160854549,1.68663104207512,3.62184719034622,0.862271971731369,0.756424320671277,1.05570674498369,0.43839146485515,1.11218899690239,2.089512999133,0.61734640922383,0.199034266818493,1.40442637462647,1.80143534980301,0.852490498186778,3.31401236056803,3.75241695969754,4.68161359798639,6.39210786080068,5.3126342571799,6.94202007993202,8.8362899005155,6.17028823219124,11.0927075248811,12.8356682932515,15.1034066952768,13.6195600037038,15.9357986293612,13.6121071480451,11.9443712696731,4.41608891984667,2.36680608472354,1.65209391491899,0.264450566663544,0.426576501070468,1.62565670302307,0.257734922644187,0.403367049246685,0.444756087689741,1.14135375667535,2.37264530772256,0.658795818896044,1.25667604400135,0.994782360205754,1.36474860983384,0,1.72910439899755,0.995706366271836,1.70701110857774,1.82797620175566,1.1270773567308,1.4255592949172,2.13347735884388,2.80543279561274,1.89709611372772,5.46157547524528,7.06494275286187,8.51440431060424,1.48226313543574,0.166845105716094,0.196558995113203,0,0.405720242777006,1.20588579876208,0.50925170356284,3.45235364940973,2.10775794807546,3.84385978463314,2.87536413054709,1.86070473834252,2.18426371180192,3.28352541331245,2.69096120282868,6.75420929908714,1.47802552133284,0.947457058852424,0.977789858652155,0.848725428875941,1.64283173801951,1.84256883185997,0.714130922658041,2.73187107000918,1.41871629695572,1.10732344824387,1.59454768657487,2.13022309130459,3.10832967358612,2.16973587872267,0,1.08781136763742,11.3105782794378,10.4855963595798,5.13761887960934,5.74337264301796,0.983609672260053,7.32165688892682,1.57754109708128,0.780877488593277,0.646270193198397,0.716906393857656,0.891194696329576,1.69845918473299,0.404810701674894,0,0.790575555893047,4.4984984299053,1.41940085208269,1.42452482933804,2.44330439030364,2.96946221350564,0,1.21390318077491,0.906970670894253,0.754420319023592,0.590603785761546,0.922305443831782,1.80899805217755,1.45413491791002,1.06949213515416,1.26414703174326,0,0,1.02131881726136,1.26042765821917,1.4229455216103,0.857348140126369,1.59606210278046,2.85390108163313,2.30368628842969,2.43571959291679,1.17335854031855,1.0591603543191,0.661585194164886,0.49465875882444,1.29171541356724,2.0506394475573,1.67121281604391,0.820704498725306,2.04036585640896,5.93360966433631,0.512612642393558,1.03193433981611,0.185194527369712,0.188368457004691,0.546776910884101,0.457556346413045,1.5298058699447,1.11961161858926,1.10559979043539,0,0.632671987162271,1.21991680276109,1.08005340821801,0.418176592028937,1.09181281873089,1.07891477107857,1.65306911450672,2.35580347785627,2.46268449254406,0,2.25477175473676,1.79419855252775,2.81279433777066,1.55560950675238,1.80823752868824,2.19642963138012,1.408286863749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| |phase1_expression=1.92178616525753,2.79180326111489,1.81999695755814,1.51232105653415,1.50268718983904,1.34303417529512,1.63528848416868,0.903863264091034,1.54867594366833,3.27690336850791,0.68487187290202,4.14815226775749,0.684802919724823,1.48614684112296,0.333109761815663,0.404950534779652,0,0.788655413395594,0.274228867211478,0.42438965179803,2.63634199468316,0.794327609607082,0.783599367416806,2.3998863419011,2.2940928106717,4.59385571292016,3.4460959692726,1.939241094173,2.09025761402011,3.78045194639896,2.21730510655305,0.635030673459631,0,0,1.73310971850765,2.1610503896604,3.06254034393554,0,0,0,1.17646297606203,0,0,0.881277725829041,0.506884656097573,0.367093504323363,1.56478268869608,4.36050312760893,6.15121311656521,4.6663175777828,1.25987779462826,1.43752564364972,1.17447824240415,0,0.336093799142464,0.771778308107841,0.573066879877513,0,3.43937983461316,2.11596391708813,3.1691570175309,1.35537812827653,1.77858959222228,0.899899717281399,2.96659908770092,0.7104801149461,4.19440154725767,2.68952813725088,1.76272340924412,1.4850653216486,1.89292465216244,4.57041575046086,4.19650227808066,1.5923803897944,0.766763768145891,1.83843757322004,2.20231761998777,5.36286819957788,4.91540906419979,2.63772575460388,3.38504281328916,5.2091337055676,5.02529398202486,7.31591393041184,4.27835093775068,2.06240009831567,1.99320353118744,2.79599168737951,0.681535739998656,0.831287161174641,1.15945795480671,4.30211938490693,2.719885334831,1.07940638327563,8.4470934268197,3.58421509677868,2.24711072210803,0.511290967734173,1.03914401841148,1.06001872353102,0.985903938436763,0,0,0,1.08245520505607,1.01343946190039,0.505524445014783,2.62622923353838,0.776813650941515,1.03909497345377,1.73485326766136,1.82679286987285,1.38369298353635,3.46662073271032,3.05730638552832,5.40366342717605,0.247194967734374,33.1132527346598,0.884610551949874,4.52947179852746,3.5334642953663,0.484875253135222,0,4.09893115816166,4.1889341362691,1.53274233125155,1.67741174308288,1.19980546198682,1.14363204365758,4.04434726393021,3.20250421973039,1.38219787324151,3.47648640384553,5.37002460393694,6.64921742590592,3.24482526135515,0.81471491080253,1.99051152976149,2.77995034277042,0.841767423545896,1.17108398666433,0.459804208866946,1.26043490863744,1.50704817835715,0.748401490664606,0.384341160854549,1.68663104207512,3.62184719034622,0.862271971731369,0.756424320671277,1.05570674498369,0.43839146485515,1.11218899690239,2.089512999133,0.61734640922383,0.199034266818493,1.40442637462647,1.80143534980301,0.852490498186778,3.31401236056803,3.75241695969754,4.68161359798639,6.39210786080068,5.3126342571799,6.94202007993202,8.8362899005155,6.17028823219124,11.0927075248811,12.8356682932515,15.1034066952768,13.6195600037038,15.9357986293612,13.6121071480451,11.9443712696731,4.41608891984667,2.36680608472354,1.65209391491899,0.264450566663544,0.426576501070468,1.62565670302307,0.257734922644187,0.403367049246685,0.444756087689741,1.14135375667535,2.37264530772256,0.658795818896044,1.25667604400135,0.994782360205754,1.36474860983384,0,1.72910439899755,0.995706366271836,1.70701110857774,1.82797620175566,1.1270773567308,1.4255592949172,2.13347735884388,2.80543279561274,1.89709611372772,5.46157547524528,7.06494275286187,8.51440431060424,1.48226313543574,0.166845105716094,0.196558995113203,0,0.405720242777006,1.20588579876208,0.50925170356284,3.45235364940973,2.10775794807546,3.84385978463314,2.87536413054709,1.86070473834252,2.18426371180192,3.28352541331245,2.69096120282868,6.75420929908714,1.47802552133284,0.947457058852424,0.977789858652155,0.848725428875941,1.64283173801951,1.84256883185997,0.714130922658041,2.73187107000918,1.41871629695572,1.10732344824387,1.59454768657487,2.13022309130459,3.10832967358612,2.16973587872267,0,1.08781136763742,11.3105782794378,10.4855963595798,5.13761887960934,5.74337264301796,0.983609672260053,7.32165688892682,1.57754109708128,0.780877488593277,0.646270193198397,0.716906393857656,0.891194696329576,1.69845918473299,0.404810701674894,0,0.790575555893047,4.4984984299053,1.41940085208269,1.42452482933804,2.44330439030364,2.96946221350564,0,1.21390318077491,0.906970670894253,0.754420319023592,0.590603785761546,0.922305443831782,1.80899805217755,1.45413491791002,1.06949213515416,1.26414703174326,0,0,1.02131881726136,1.26042765821917,1.4229455216103,0.857348140126369,1.59606210278046,2.85390108163313,2.30368628842969,2.43571959291679,1.17335854031855,1.0591603543191,0.661585194164886,0.49465875882444,1.29171541356724,2.0506394475573,1.67121281604391,0.820704498725306,2.04036585640896,5.93360966433631,0.512612642393558,1.03193433981611,0.185194527369712,0.188368457004691,0.546776910884101,0.457556346413045,1.5298058699447,1.11961161858926,1.10559979043539,0,0.632671987162271,1.21991680276109,1.08005340821801,0.418176592028937,1.09181281873089,1.07891477107857,1.65306911450672,2.35580347785627,2.46268449254406,0,2.25477175473676,1.79419855252775,2.81279433777066,1.55560950675238,1.80823752868824,2.19642963138012,1.408286863749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| ||
|short_description=p2@LOC635087,p2@LOC675851,p2@Ndufc2 | |||
}} | }} |
Latest revision as of 13:36, 25 September 2015
Short description: | p2@LOC635087, p2@LOC675851, p2@Ndufc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LOC635087_5end, CAGE_peak_2_at_LOC675851_5end, CAGE_peak_2_at_Ndufc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:79 |
Association with transcript: | 22bp_to_ENSMUST00000149122_5end |
EntrezGene: | 635087,675851,68197 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 3.08e-08 | 92 |
tube | 4.72e-08 | 114 |
regional part of nervous system | 4.30e-07 | 54 |
anatomical conduit | 8.13e-07 | 122 |
neural tube | 8.83e-07 | 52 |
neural rod | 8.83e-07 | 52 |
future spinal cord | 8.83e-07 | 52 |
neural keel | 8.83e-07 | 52 |