FFCP PHASE1:Mm9::chr7:134537118..134537177,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:134537118..134537177,- to FFCP PHASE1:Mm9::chr7:134537118..134537177,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100044339,101604 | |EntrezGene=100044339,101604 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1569 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z6C2,D3Z3V4,E9Q5E6,E9PZQ8,Q6IS61 | |UniProt=D3Z6C2,D3Z3V4,E9Q5E6,E9PZQ8,Q6IS61 | ||
|association_with_transcript=0bp_to_ENSMUST00000074249,ENSMUST00000106303,ENSMUST00000163407,ENSMUST00000165495,NM_198011,uc009jvg.2,uc012fud.1_5end | |||
|cluster_id=chr7:134537118..134537177,- | |||
|description=CAGE_peak_1_at_E430018J23Rik_5end,CAGE_peak_1_at_LOC100044339_5end | |||
|id=chr7:134537118..134537177,- | |||
|ontology_enrichment_celltype=CL:0002563!7.91e-07!9;CL:0002251!7.91e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.91e-07,9;CL:0002251,7.91e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.34e-12!43;UBERON:0000344!2.00e-10!15;UBERON:0001242!3.04e-09!13;UBERON:0000060!3.04e-09!13;UBERON:0001262!3.04e-09!13;UBERON:0004786!3.04e-09!13;UBERON:0005409!7.04e-08!59;UBERON:0003350!7.91e-07!9;UBERON:0004808!7.91e-07!9;UBERON:0001277!7.91e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.34e-14,31;UBERON:0000344,2.00e-10,15;UBERON:0001242,3.04e-09,13;UBERON:0001262,3.04e-09,13;UBERON:0004786,3.04e-09,13;UBERON:0005409,2.20e-08,47;UBERON:0003350,7.91e-07,9;UBERON:0004808,7.91e-07,9;UBERON:0001277,7.91e-07,9 | |||
|phase1_expression=8.32774004944929,35.5954915792148,37.7649368693315,38.4129548359674,43.5779285053322,14.1018588405987,14.9512089981136,21.950964985068,28.5801105967883,31.3646465271471,11.8140398075598,11.1681022593471,14.2096605842901,22.4670434216823,1.33243904726265,2.42970320867791,2.09868563438444,7.25562980323947,9.46089591879598,8.48779303596061,3.82694805679814,6.056748023254,1.82839852397255,15.8392498565473,19.9586074528438,32.7312219545562,23.6919097887491,24.3482492935055,18.6222951067246,18.9022597319948,16.8515188098032,13.9706748161119,9.84103660135312,15.8481681015439,19.0642069035841,12.9663023379624,14.9043630071529,1.67412652294763,2.3440060335714,1.57057123192139,1.76469446409304,4.09827290975067,1.94204141212461,11.9601977076798,9.0225468785368,6.9747765821439,9.38869613217647,6.5407546914134,8.12838876117546,6.41618666945135,4.89952475688769,2.87505128729943,10.5703041816374,12.3311564141929,14.452033363126,6.43148590089868,6.30373567865265,7.73508138416164,8.6996078169627,10.0508286061686,11.4089652631112,6.09920157724438,7.11435836888911,6.29929802096979,8.89979726310277,7.104801149461,7.19040265244171,9.98967593836042,5.80661828927475,8.23536223823313,5.46844899513593,3.99911378165325,5.74258206474195,7.22695715368229,4.31304619582064,7.35375029288017,7.70811166995721,6.76742891851495,6.14426133024974,7.25374582516066,6.77008562657831,5.2091337055676,3.62937898701795,4.50210088025344,7.18151764551008,4.41942878210502,3.27454865837937,7.64237727883732,2.49896437999507,2.94729084416464,20.5803786978191,4.30211938490693,19.039197343817,8.09554787456726,9.74664626171504,7.16843019355737,5.61777680527007,4.26075806445144,4.67614808285164,2.47337702157238,7.46470124816407,1.28326477414318,0,0,4.32982082022428,3.54703811665138,5.56076889516262,8.90634261808668,4.14300613835475,9.50029690014878,6.7659277438793,7.61163695780353,7.61031140944993,7.53613202763113,9.8774513993992,7.1629957057915,6.92145909656247,6.79616977523585,0.884610551949874,4.20593809863264,2.65009822152472,3.87900202508178,5.59175283654366,8.78342391034641,9.42510180660548,15.0719662573069,7.54835284387298,7.19883277192089,7.11593271609162,7.18995069143149,9.60751265919116,8.16753288733619,7.82209440865244,7.41574826257959,8.3115217823824,5.67844420737152,11.8133662066367,6.84238338355512,17.4378703319236,4.41927897361595,9.88915366516548,9.65588838620586,9.72335500948886,4.9732589885786,7.68812440410005,8.07116437794554,6.46541899462129,9.8307280880826,5.38919982332106,5.8622884852024,8.09375171154165,10.7405908889512,10.8438427197983,9.05455632957633,7.81972118350185,11.9420560091096,6.31991868581911,4.88961023517959,6.53576048609863,6.83515049367156,6.80125573945179,6.48223421259654,5.20838418287463,5.1158700254325,4.01094493507183,7.20855228726264,4.29237442239391,5.48797109125697,4.60767579757745,6.07419617092652,5.02626619184305,4.09359964790931,6.58650345873152,5.90508242545636,5.88811855979556,5.14523061896422,25.1118275067686,16.3959351331397,9.17139477301506,7.19933682767359,8.76298736990235,9.07575860805041,7.78323153457046,10.2721838100782,9.49058123089023,14.1641101062649,10.304743560811,11.5394753783867,15.7920910566487,14.3811105384675,13.6166971421057,12.3467589417708,8.72472344384176,6.28366819353509,15.7790829942313,6.31319116320474,5.62462212786115,6.38235961001899,5.88099795255593,5.46157547524528,6.59394656933774,6.78684401569903,13.6368208460088,3.00321190288969,2.75182593158484,1.79889689907883,2.02860121388503,4.3411888755435,8.65727896056827,5.75392274901621,7.13394997810156,5.76578967694971,8.62609239164127,11.5363693777236,5.92871578917665,7.57736633841335,7.17589654087649,13.0259750768109,10.1614254591633,6.253216588426,5.0519142697028,4.58311731593008,6.10194645550105,6.86775655511445,8.56957107189649,8.19561321002755,5.51723004371669,9.08005227559977,5.10255259703959,6.06294264448231,7.9435091658312,9.9807850421243,3.01582567878545,5.4390568381871,4.91764273019036,8.82997588175144,5.13761887960934,4.33683240391152,3.93443868904021,4.03953483526997,6.62567260774139,4.29482618726302,8.83235930704476,6.21318874676635,6.01556420022464,5.37845408498782,4.85772842009873,5.55286130031493,7.11518000303742,5.46246237917072,5.81954349353901,14.6013795007149,7.98146100832523,6.10389454998381,1.32745138339963,12.1390318077491,4.83717691143602,7.16699303072413,10.9261700365886,10.7602301780375,10.0787034335606,5.08947221268508,6.41695281092498,6.63677191665214,8.4334886859999,6.18813259489121,13.2771446243977,6.30213829109586,9.44318391614108,8.3591443662321,6.91626911204867,8.74007206250146,8.88564711251453,12.4830629136986,2.3467170806371,3.81297727554876,5.51320995137405,3.46261131177108,8.39615018818709,5.12659861889325,6.2073618881631,4.76008609260678,11.3677526285642,5.7481843623258,3.41741761595705,8.04908785056568,6.11141940320049,3.57900068308913,2.7338845544205,3.66045077130436,7.13909405974192,7.97723278244851,9.12119827109197,3.81868247206045,10.9135917785492,7.9294592179471,6.372315108486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| |phase1_expression=8.32774004944929,35.5954915792148,37.7649368693315,38.4129548359674,43.5779285053322,14.1018588405987,14.9512089981136,21.950964985068,28.5801105967883,31.3646465271471,11.8140398075598,11.1681022593471,14.2096605842901,22.4670434216823,1.33243904726265,2.42970320867791,2.09868563438444,7.25562980323947,9.46089591879598,8.48779303596061,3.82694805679814,6.056748023254,1.82839852397255,15.8392498565473,19.9586074528438,32.7312219545562,23.6919097887491,24.3482492935055,18.6222951067246,18.9022597319948,16.8515188098032,13.9706748161119,9.84103660135312,15.8481681015439,19.0642069035841,12.9663023379624,14.9043630071529,1.67412652294763,2.3440060335714,1.57057123192139,1.76469446409304,4.09827290975067,1.94204141212461,11.9601977076798,9.0225468785368,6.9747765821439,9.38869613217647,6.5407546914134,8.12838876117546,6.41618666945135,4.89952475688769,2.87505128729943,10.5703041816374,12.3311564141929,14.452033363126,6.43148590089868,6.30373567865265,7.73508138416164,8.6996078169627,10.0508286061686,11.4089652631112,6.09920157724438,7.11435836888911,6.29929802096979,8.89979726310277,7.104801149461,7.19040265244171,9.98967593836042,5.80661828927475,8.23536223823313,5.46844899513593,3.99911378165325,5.74258206474195,7.22695715368229,4.31304619582064,7.35375029288017,7.70811166995721,6.76742891851495,6.14426133024974,7.25374582516066,6.77008562657831,5.2091337055676,3.62937898701795,4.50210088025344,7.18151764551008,4.41942878210502,3.27454865837937,7.64237727883732,2.49896437999507,2.94729084416464,20.5803786978191,4.30211938490693,19.039197343817,8.09554787456726,9.74664626171504,7.16843019355737,5.61777680527007,4.26075806445144,4.67614808285164,2.47337702157238,7.46470124816407,1.28326477414318,0,0,4.32982082022428,3.54703811665138,5.56076889516262,8.90634261808668,4.14300613835475,9.50029690014878,6.7659277438793,7.61163695780353,7.61031140944993,7.53613202763113,9.8774513993992,7.1629957057915,6.92145909656247,6.79616977523585,0.884610551949874,4.20593809863264,2.65009822152472,3.87900202508178,5.59175283654366,8.78342391034641,9.42510180660548,15.0719662573069,7.54835284387298,7.19883277192089,7.11593271609162,7.18995069143149,9.60751265919116,8.16753288733619,7.82209440865244,7.41574826257959,8.3115217823824,5.67844420737152,11.8133662066367,6.84238338355512,17.4378703319236,4.41927897361595,9.88915366516548,9.65588838620586,9.72335500948886,4.9732589885786,7.68812440410005,8.07116437794554,6.46541899462129,9.8307280880826,5.38919982332106,5.8622884852024,8.09375171154165,10.7405908889512,10.8438427197983,9.05455632957633,7.81972118350185,11.9420560091096,6.31991868581911,4.88961023517959,6.53576048609863,6.83515049367156,6.80125573945179,6.48223421259654,5.20838418287463,5.1158700254325,4.01094493507183,7.20855228726264,4.29237442239391,5.48797109125697,4.60767579757745,6.07419617092652,5.02626619184305,4.09359964790931,6.58650345873152,5.90508242545636,5.88811855979556,5.14523061896422,25.1118275067686,16.3959351331397,9.17139477301506,7.19933682767359,8.76298736990235,9.07575860805041,7.78323153457046,10.2721838100782,9.49058123089023,14.1641101062649,10.304743560811,11.5394753783867,15.7920910566487,14.3811105384675,13.6166971421057,12.3467589417708,8.72472344384176,6.28366819353509,15.7790829942313,6.31319116320474,5.62462212786115,6.38235961001899,5.88099795255593,5.46157547524528,6.59394656933774,6.78684401569903,13.6368208460088,3.00321190288969,2.75182593158484,1.79889689907883,2.02860121388503,4.3411888755435,8.65727896056827,5.75392274901621,7.13394997810156,5.76578967694971,8.62609239164127,11.5363693777236,5.92871578917665,7.57736633841335,7.17589654087649,13.0259750768109,10.1614254591633,6.253216588426,5.0519142697028,4.58311731593008,6.10194645550105,6.86775655511445,8.56957107189649,8.19561321002755,5.51723004371669,9.08005227559977,5.10255259703959,6.06294264448231,7.9435091658312,9.9807850421243,3.01582567878545,5.4390568381871,4.91764273019036,8.82997588175144,5.13761887960934,4.33683240391152,3.93443868904021,4.03953483526997,6.62567260774139,4.29482618726302,8.83235930704476,6.21318874676635,6.01556420022464,5.37845408498782,4.85772842009873,5.55286130031493,7.11518000303742,5.46246237917072,5.81954349353901,14.6013795007149,7.98146100832523,6.10389454998381,1.32745138339963,12.1390318077491,4.83717691143602,7.16699303072413,10.9261700365886,10.7602301780375,10.0787034335606,5.08947221268508,6.41695281092498,6.63677191665214,8.4334886859999,6.18813259489121,13.2771446243977,6.30213829109586,9.44318391614108,8.3591443662321,6.91626911204867,8.74007206250146,8.88564711251453,12.4830629136986,2.3467170806371,3.81297727554876,5.51320995137405,3.46261131177108,8.39615018818709,5.12659861889325,6.2073618881631,4.76008609260678,11.3677526285642,5.7481843623258,3.41741761595705,8.04908785056568,6.11141940320049,3.57900068308913,2.7338845544205,3.66045077130436,7.13909405974192,7.97723278244851,9.12119827109197,3.81868247206045,10.9135917785492,7.9294592179471,6.372315108486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| ||
|short_description=p1@E430018J23Rik,p1@LOC100044339 | |||
}} | }} |
Latest revision as of 22:39, 25 September 2015
Short description: | p1@E430018J23Rik, p1@LOC100044339 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_E430018J23Rik_5end, CAGE_peak_1_at_LOC100044339_5end |
Coexpression cluster: | MCL_coexpression_mm9:1569 |
Association with transcript: | 0bp_to_ENSMUST00000074249, ENSMUST00000106303, ENSMUST00000163407, ENSMUST00000165495, NM_198011, uc009jvg.2, uc012fud.1_5end |
EntrezGene: | 100044339,101604 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.91e-07 | 9 |
epithelial cell of alimentary canal | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.34e-14 | 31 |
mucosa | 2.00e-10 | 15 |
intestinal mucosa | 3.04e-09 | 13 |
wall of intestine | 3.04e-09 | 13 |
gastrointestinal system mucosa | 3.04e-09 | 13 |
gastrointestinal system | 2.20e-08 | 47 |
epithelium of mucosa | 7.91e-07 | 9 |
gastrointestinal system epithelium | 7.91e-07 | 9 |
intestinal epithelium | 7.91e-07 | 9 |