FFCP PHASE1:Mm9::chr8:11912972..11913001,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=114 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:11912972..11913001,+ | |||
|description=CAGE_peak_at_chr8:11912972..11913001,+ | |||
|id=chr8:11912972..11913001,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.43e-14!33;CL:0000047!1.43e-14!33;CL:0000031!1.43e-14!33;CL:0000404!1.43e-14!33;CL:0000107!1.04e-12!9;CL:0000221!3.36e-11!44;CL:0000133!3.36e-11!44;CL:0000393!3.57e-11!39;CL:0000211!3.57e-11!39;CL:0002319!2.01e-10!43;CL:0000055!5.90e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,8.53e-48,9;CL:0000540,1.52e-29,33;CL:0000047,1.52e-29,33;CL:0000031,1.52e-29,33;CL:0000404,1.52e-29,33;CL:0000393,1.01e-24,39;CL:0000211,1.01e-24,39;CL:0002319,2.97e-22,43;CL:0000221,1.05e-21,44;CL:0000133,1.05e-21,44;CL:0002608,5.67e-16,3;CL:0002321,6.22e-13,70;CL:0000723,1.75e-09,91;CL:0000048,1.75e-09,91;CL:0000034,9.05e-09,97;CL:0002609,2.92e-08,6;CL:0000120,1.90e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!1.04e-12!9;UBERON:0001017!6.64e-10!73;UBERON:0005743!6.64e-10!73;UBERON:0000010!7.21e-10!11;UBERON:0000073!2.24e-09!75;UBERON:0001016!2.24e-09!75;UBERON:0004121!5.58e-07!102;UBERON:0000924!5.58e-07!102;UBERON:0006601!5.58e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,8.53e-48,9;UBERON:0000010,6.24e-39,11;UBERON:0010313,1.90e-17,3;UBERON:0002342,1.90e-17,3;UBERON:0002005,1.90e-17,3;UBERON:0005428,1.90e-17,3;UBERON:0005062,1.90e-17,3;UBERON:0000013,5.76e-17,3;UBERON:0000011,1.72e-16,3;UBERON:0001017,1.90e-16,73;UBERON:0001016,5.91e-16,75;UBERON:0004121,3.74e-12,95;UBERON:0000924,3.74e-12,95;UBERON:0006601,3.74e-12,95;UBERON:0001954,3.78e-07,7;UBERON:0003022,3.78e-07,7;UBERON:0002421,3.78e-07,7;UBERON:0000349,3.78e-07,7;UBERON:0002600,3.78e-07,7 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0,0.270011876663381,0.210324961351382,0,0,7.22695715368229,5.75072826109418,5.51531271966013,0,0,0.153606533256243,0,0.548925861614458,0.52091337055676,0,0,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52879149296603,0.347648640384553,0.511430914660661,0,0.973447578406546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0.639864751605702,1.16118335930219,0.644337306610467,0.403367049246685,0.444756087689741,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,12.9358369960665,12.4940398174924,19.3881057959519,9.31978312014953,8.46634961513098,7.35998980050964,12.1443210502468,9.9366991689846,9.88219444866309,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,2.12808280370728,0.891844088010353,0.164549020602121,0,0,0,0,0,0.161464426695906,0.301564624640779,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.432021363287205,0.627264888043406,0,0,0.165306911450672,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.853668028770671,0.972426868273176,0,0,0.44449345560323,0.206035057238894,0,0.758091635291392,0.50695859978048,0.377252682772152,0.280924522409647,0.128050304809739,0.114870937911227,0,0.463537303779422,0.77163688185482,0.412085900803307,0.147198920134397,0.685738504770831,0.532427418478012,0.476872379894642,0.581385666529314,0.564656282491984,0.423073039458382,0.73171189149109,0,0.135804113845862,0,0.474540072496697,0.29551344712669,0,0.464810523557898,0,0.499621155875892,0.467863216890817,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.05798195854407,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0,0.270011876663381,0.210324961351382,0,0,7.22695715368229,5.75072826109418,5.51531271966013,0,0,0.153606533256243,0,0.548925861614458,0.52091337055676,0,0,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52879149296603,0.347648640384553,0.511430914660661,0,0.973447578406546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0.639864751605702,1.16118335930219,0.644337306610467,0.403367049246685,0.444756087689741,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,12.9358369960665,12.4940398174924,19.3881057959519,9.31978312014953,8.46634961513098,7.35998980050964,12.1443210502468,9.9366991689846,9.88219444866309,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,2.12808280370728,0.891844088010353,0.164549020602121,0,0,0,0,0,0.161464426695906,0.301564624640779,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.406638934253697,0.432021363287205,0.627264888043406,0,0,0.165306911450672,0,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0.853668028770671,0.972426868273176,0,0,0.44449345560323,0.206035057238894,0,0.758091635291392,0.50695859978048,0.377252682772152,0.280924522409647,0.128050304809739,0.114870937911227,0,0.463537303779422,0.77163688185482,0.412085900803307,0.147198920134397,0.685738504770831,0.532427418478012,0.476872379894642,0.581385666529314,0.564656282491984,0.423073039458382,0.73171189149109,0,0.135804113845862,0,0.474540072496697,0.29551344712669,0,0.464810523557898,0,0.499621155875892,0.467863216890817,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p@chr8:11912972..11913001,+ | |||
}} | }} |
Latest revision as of 23:55, 5 August 2015
Short description: | p@chr8:11912972..11913001, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:11912972..11913001, + |
Coexpression cluster: | MCL_coexpression_mm9:114 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 8.53e-48 | 9 |
neuron | 1.52e-29 | 33 |
neuronal stem cell | 1.52e-29 | 33 |
neuroblast | 1.52e-29 | 33 |
electrically signaling cell | 1.52e-29 | 33 |
electrically responsive cell | 1.01e-24 | 39 |
electrically active cell | 1.01e-24 | 39 |
neural cell | 2.97e-22 | 43 |
ectodermal cell | 1.05e-21 | 44 |
neurectodermal cell | 1.05e-21 | 44 |
hippocampal neuron | 5.67e-16 | 3 |
embryonic cell | 6.22e-13 | 70 |
somatic stem cell | 1.75e-09 | 91 |
multi fate stem cell | 1.75e-09 | 91 |
stem cell | 9.05e-09 | 97 |
neuron of cerebral cortex | 2.92e-08 | 6 |
granule cell | 1.90e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 8.53e-48 | 9 |
peripheral nervous system | 6.24e-39 | 11 |
neural crest-derived structure | 1.90e-17 | 3 |
neural crest | 1.90e-17 | 3 |
enteric nervous system | 1.90e-17 | 3 |
vagal neural crest | 1.90e-17 | 3 |
neural fold | 1.90e-17 | 3 |
sympathetic nervous system | 5.76e-17 | 3 |
parasympathetic nervous system | 1.72e-16 | 3 |
central nervous system | 1.90e-16 | 73 |
nervous system | 5.91e-16 | 75 |
ectoderm-derived structure | 3.74e-12 | 95 |
ectoderm | 3.74e-12 | 95 |
presumptive ectoderm | 3.74e-12 | 95 |
Ammon's horn | 3.78e-07 | 7 |
lobe parts of cerebral cortex | 3.78e-07 | 7 |
hippocampal formation | 3.78e-07 | 7 |
limbic system | 3.78e-07 | 7 |
limbic lobe | 3.78e-07 | 7 |